RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 TALDO1P37837 337 aa13.22□□□□□ -0.29
HMGN1-204ENST00000380749 SSBP2P81877 361 aaPredicted RBP13.22□□□□□ -0.29
HMGN1-204ENST00000380749 PLA2G7Q13093 441 aa13.22□□□□□ -0.29
HMGN1-204ENST00000380749 TMEM177Q53S58 311 aa13.22□□□□□ -0.29
HMGN1-204ENST00000380749 HAPLN4Q86UW8 402 aa13.22□□□□□ -0.29
HMGN1-204ENST00000380749 SGPP2Q8IWX5 399 aa13.22□□□□□ -0.29
HMGN1-204ENST00000380749 ADTRPQ96IZ2 230 aa13.22□□□□□ -0.29
HMGN1-204ENST00000380749 ANKRD34BA5PLL1 514 aa13.21□□□□□ -0.29
HMGN1-204ENST00000380749 METTL21EPA6NDL7 271 aa13.21□□□□□ -0.29
HMGN1-204ENST00000380749 IFITM5A6NNB3 132 aa13.21□□□□□ -0.29
HMGN1-204ENST00000380749 GNB3P16520 340 aa13.21□□□□□ -0.29
HMGN1-204ENST00000380749 HSPA13P48723 471 aa13.21□□□□□ -0.29
HMGN1-204ENST00000380749 OR10A3P58181 314 aa13.21□□□□□ -0.29
HMGN1-204ENST00000380749 PJVKQ0ZLH3 352 aa13.21□□□□□ -0.29
HMGN1-204ENST00000380749 ARFRP1Q13795 201 aa13.21□□□□□ -0.29
HMGN1-204ENST00000380749 VMA21Q3ZAQ7 101 aa13.21□□□□□ -0.29
HMGN1-204ENST00000380749 BVESQ8NE79 360 aa13.21□□□□□ -0.29
HMGN1-204ENST00000380749 MAFIPQ8WZ33 124 aa13.21□□□□□ -0.29
HMGN1-204ENST00000380749 PHB2Q99623 299 aa13.21□□□□□ -0.29
HMGN1-204ENST00000380749 TINAGL1Q9GZM7 467 aaPredicted RBP13.21□□□□□ -0.29
HMGN1-204ENST00000380749 COA4Q9NYJ1 87 aa13.21□□□□□ -0.29
HMGN1-204ENST00000380749 BRI3O95415 125 aa13.2□□□□□ -0.3
HMGN1-204ENST00000380749 CRYGBP07316 175 aa13.2□□□□□ -0.3
HMGN1-204ENST00000380749 SSX1Q16384 188 aa13.2□□□□□ -0.3
HMGN1-204ENST00000380749 OR9G4Q8NGQ1 327 aa13.2□□□□□ -0.3
HMGN1-204ENST00000380749 NDUFB11Q9NX14 153 aa13.2□□□□□ -0.3
HMGN1-204ENST00000380749 ZNF230Q9UIE0 474 aaPredicted RBP13.2□□□□□ -0.3
HMGN1-204ENST00000380749 RAB27BO00194 218 aa13.2□□□□□ -0.3
HMGN1-204ENST00000380749 CREBL2O60519 120 aaPredicted RBP13.2□□□□□ -0.3
HMGN1-204ENST00000380749 IGHV4-30-4P0DP06 118 aa13.2□□□□□ -0.3
HMGN1-204ENST00000380749 RAB3BP20337 219 aa13.2□□□□□ -0.3
HMGN1-204ENST00000380749 ARL6IP1Q15041 203 aa13.2□□□□□ -0.3
HMGN1-204ENST00000380749 CASC10Q5T4H9 136 aa13.2□□□□□ -0.3
HMGN1-204ENST00000380749 C5orf30Q96GV9 206 aa13.2□□□□□ -0.3
HMGN1-204ENST00000380749 USMG5Q96IX5 58 aa13.2□□□□□ -0.3
HMGN1-204ENST00000380749 PALMDQ9NP74 551 aa13.2□□□□□ -0.3
HMGN1-204ENST00000380749 PEF1Q9UBV8 284 aaKnown RBP13.2□□□□□ -0.3
HMGN1-204ENST00000380749 H0Y980 276 aa13.19□□□□□ -0.3
HMGN1-204ENST00000380749 MPPED1O15442 326 aa13.19□□□□□ -0.3
HMGN1-204ENST00000380749 CRYZL1O95825 349 aa13.19□□□□□ -0.3
HMGN1-204ENST00000380749 DUTP33316 252 aaKnown RBP13.19□□□□□ -0.3
HMGN1-204ENST00000380749 UBE2KP61086 200 aa13.19□□□□□ -0.3
HMGN1-204ENST00000380749 DEFA5Q01523 94 aa13.19□□□□□ -0.3
HMGN1-204ENST00000380749 KLF5Q13887 457 aaPredicted RBP13.19□□□□□ -0.3
HMGN1-204ENST00000380749 TNXAQ16473 311 aa13.19□□□□□ -0.3
HMGN1-204ENST00000380749 TATDN3Q17R31 274 aa13.19□□□□□ -0.3
HMGN1-204ENST00000380749 IZUMO2Q6UXV1 221 aa13.19□□□□□ -0.3
HMGN1-204ENST00000380749 Q6ZS49 121 aa13.19□□□□□ -0.3
HMGN1-204ENST00000380749 TEX45Q8NA69 505 aa13.19□□□□□ -0.3
HMGN1-204ENST00000380749 CNBD2Q96M20 576 aa13.19□□□□□ -0.3
HMGN1-204ENST00000380749 TM2D3Q9BRN9 247 aa13.19□□□□□ -0.3
HMGN1-204ENST00000380749 A0A0B4J203 849 aa13.18□□□□□ -0.3
HMGN1-204ENST00000380749 TRDV1A0A1B0GX56 115 aa13.18□□□□□ -0.3
HMGN1-204ENST00000380749 SHISA3A0PJX4 238 aa13.18□□□□□ -0.3
HMGN1-204ENST00000380749 OR9G9P0C7N8 305 aa13.18□□□□□ -0.3
HMGN1-204ENST00000380749 APELAP0DMC3 54 aa13.18□□□□□ -0.3
HMGN1-204ENST00000380749 LYL1P12980 280 aa13.18□□□□□ -0.3
HMGN1-204ENST00000380749 SYNJ2BPP57105 145 aa13.18□□□□□ -0.3
HMGN1-204ENST00000380749 DYRK1AQ13627 763 aa13.18□□□□□ -0.3
HMGN1-204ENST00000380749 RPEL1Q2QD12 228 aa13.18□□□□□ -0.3
HMGN1-204ENST00000380749 ZNF343Q6P1L6 599 aa13.18□□□□□ -0.3
HMGN1-204ENST00000380749 H1FOOQ8IZA3 346 aaPredicted RBP13.18□□□□□ -0.3
HMGN1-204ENST00000380749 OSR1Q8TAX0 266 aaPredicted RBP13.18□□□□□ -0.3
HMGN1-204ENST00000380749 SRSF12Q8WXF0 261 aaKnown RBP13.18□□□□□ -0.3
HMGN1-204ENST00000380749 ACOT12Q8WYK0 555 aa13.18□□□□□ -0.3
HMGN1-204ENST00000380749 DDB2Q92466 427 aa13.18□□□□□ -0.3
HMGN1-204ENST00000380749 ATG5Q9H1Y0 275 aa13.18□□□□□ -0.3
HMGN1-204ENST00000380749 SRRM4A7MD48 611 aaKnown RBP13.17□□□□□ -0.3
HMGN1-204ENST00000380749 A8MZ25 164 aa13.17□□□□□ -0.3
HMGN1-204ENST00000380749 ACTL6BO94805 426 aa13.17□□□□□ -0.3
HMGN1-204ENST00000380749 GALP22466 123 aa13.17□□□□□ -0.3
HMGN1-204ENST00000380749 DTYMKP23919 212 aa13.17□□□□□ -0.3
HMGN1-204ENST00000380749 PRSS8Q16651 343 aa13.17□□□□□ -0.3
HMGN1-204ENST00000380749 LCN12Q6JVE5 192 aa13.17□□□□□ -0.3
HMGN1-204ENST00000380749 GTSCR1Q86UQ5 136 aa13.17□□□□□ -0.3
HMGN1-204ENST00000380749 Q8N1Y9 231 aa13.17□□□□□ -0.3
HMGN1-204ENST00000380749 ADAD2Q8NCV1 583 aaKnown RBP13.17□□□□□ -0.3
HMGN1-204ENST00000380749 CITED4Q96RK1 184 aa13.17□□□□□ -0.3
HMGN1-204ENST00000380749 MSGN1A6NI15 193 aa13.16□□□□□ -0.3
HMGN1-204ENST00000380749 LINC00473A8K010 186 aa13.16□□□□□ -0.3
HMGN1-204ENST00000380749 OR2A4O95047 310 aa13.16□□□□□ -0.3
HMGN1-204ENST00000380749 CD36P16671 472 aa13.16□□□□□ -0.3
HMGN1-204ENST00000380749 C22orf42Q6IC83 251 aa13.16□□□□□ -0.3
HMGN1-204ENST00000380749 IDO2Q6ZQW0 420 aa13.16□□□□□ -0.3
HMGN1-204ENST00000380749 ZNF645Q8N7E2 425 aa13.16□□□□□ -0.3
HMGN1-204ENST00000380749 SNAPC3Q92966 411 aa13.16□□□□□ -0.3
HMGN1-204ENST00000380749 PEMTQ9UBM1 199 aa13.16□□□□□ -0.3
HMGN1-204ENST00000380749 MRPS7Q9Y2R9 242 aaKnown RBP13.16□□□□□ -0.3
HMGN1-204ENST00000380749 FAM223BA6NKX1 122 aa13.15□□□□□ -0.3
HMGN1-204ENST00000380749 TRBV12-3P01733 135 aa13.15□□□□□ -0.3
HMGN1-204ENST00000380749 GABARAPL2P60520 117 aa13.15□□□□□ -0.3
HMGN1-204ENST00000380749 EXOSC2Q13868 293 aaKnown RBP13.15□□□□□ -0.3
HMGN1-204ENST00000380749 CDK10Q15131 360 aa13.15□□□□□ -0.3
HMGN1-204ENST00000380749 MRGPRG-AS1Q2M3A8 158 aa13.15□□□□□ -0.3
HMGN1-204ENST00000380749 KCTD9Q7L273 389 aa13.15□□□□□ -0.3
HMGN1-204ENST00000380749 FAM223AQ8IWN6 122 aa13.15□□□□□ -0.3
HMGN1-204ENST00000380749 Q8N402 240 aa13.15□□□□□ -0.3
HMGN1-204ENST00000380749 ISOC1Q96CN7 298 aa13.15□□□□□ -0.3
HMGN1-204ENST00000380749 SPIN2AQ99865 258 aa13.15□□□□□ -0.3
HMGN1-204ENST00000380749 SPIN2BQ9BPZ2 258 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms