RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 FABP5Q01469 135 aa11.35□□□□□ -0.59
CLCN6-204ENST00000376491 ADAD2Q8NCV1 583 aaKnown RBP11.35□□□□□ -0.59
CLCN6-204ENST00000376491 COA4Q9NYJ1 87 aa11.35□□□□□ -0.59
CLCN6-204ENST00000376491 SIGLEC8Q9NYZ4 499 aa11.35□□□□□ -0.59
CLCN6-204ENST00000376491 V9GY05 133 aa11.35□□□□□ -0.59
CLCN6-204ENST00000376491 MSGN1A6NI15 193 aa11.34□□□□□ -0.59
CLCN6-204ENST00000376491 SHOXO15266 292 aa11.34□□□□□ -0.59
CLCN6-204ENST00000376491 ARL6IP5O75915 188 aa11.34□□□□□ -0.59
CLCN6-204ENST00000376491 CALRP27797 417 aaKnown RBP11.34□□□□□ -0.59
CLCN6-204ENST00000376491 HES5Q5TA89 166 aa11.34□□□□□ -0.59
CLCN6-204ENST00000376491 OR10J5Q8NHC4 309 aa11.34□□□□□ -0.59
CLCN6-204ENST00000376491 MAFIPQ8WZ33 124 aa11.34□□□□□ -0.59
CLCN6-204ENST00000376491 DDB2Q92466 427 aa11.34□□□□□ -0.59
CLCN6-204ENST00000376491 USMG5Q96IX5 58 aa11.34□□□□□ -0.59
CLCN6-204ENST00000376491 DUSP21Q9H596 190 aa11.34□□□□□ -0.59
CLCN6-204ENST00000376491 PLECQ15149 4684 aaKnown RBP11.34□□□□□ -0.59
CLCN6-204ENST00000376491 MLLT11Q13015 90 aaPredicted RBP11.33□□□□□ -0.6
CLCN6-204ENST00000376491 TRAM1Q15629 374 aa11.33□□□□□ -0.6
CLCN6-204ENST00000376491 PRSS8Q16651 343 aa11.33□□□□□ -0.6
CLCN6-204ENST00000376491 RPEL1Q2QD12 228 aa11.33□□□□□ -0.6
CLCN6-204ENST00000376491 LCN12Q6JVE5 192 aa11.33□□□□□ -0.6
CLCN6-204ENST00000376491 TEX45Q8NA69 505 aa11.33□□□□□ -0.6
CLCN6-204ENST00000376491 RAB3CQ96E17 227 aa11.33□□□□□ -0.6
CLCN6-204ENST00000376491 PHB2Q99623 299 aa11.33□□□□□ -0.6
CLCN6-204ENST00000376491 ZNF230Q9UIE0 474 aaPredicted RBP11.33□□□□□ -0.6
CLCN6-204ENST00000376491 RAB22AQ9UL26 194 aa11.33□□□□□ -0.6
CLCN6-204ENST00000376491 HYDINQ4G0P3 5121 aa11.33□□□□□ -0.6
CLCN6-204ENST00000376491 IGKV1D-8A0A087WSZ0 117 aa11.32□□□□□ -0.6
CLCN6-204ENST00000376491 SHISA3A0PJX4 238 aa11.32□□□□□ -0.6
CLCN6-204ENST00000376491 LINC00473A8K010 186 aa11.32□□□□□ -0.6
CLCN6-204ENST00000376491 RAB27BO00194 218 aa11.32□□□□□ -0.6
CLCN6-204ENST00000376491 MFNGO00587 321 aa11.32□□□□□ -0.6
CLCN6-204ENST00000376491 PRH1P02810 166 aa11.32□□□□□ -0.6
CLCN6-204ENST00000376491 OR9G9P0C7N8 305 aa11.32□□□□□ -0.6
CLCN6-204ENST00000376491 RRASP10301 218 aa11.32□□□□□ -0.6
CLCN6-204ENST00000376491 GNB3P16520 340 aa11.32□□□□□ -0.6
CLCN6-204ENST00000376491 PSMA1P25786 263 aaKnown RBP11.32□□□□□ -0.6
CLCN6-204ENST00000376491 DUTP33316 252 aaKnown RBP11.32□□□□□ -0.6
CLCN6-204ENST00000376491 UBE2KP61086 200 aa11.32□□□□□ -0.6
CLCN6-204ENST00000376491 TAGLNQ01995 201 aaKnown RBP11.32□□□□□ -0.6
CLCN6-204ENST00000376491 ZNF45Q02386 682 aa11.32□□□□□ -0.6
CLCN6-204ENST00000376491 TNXAQ16473 311 aa11.32□□□□□ -0.6
CLCN6-204ENST00000376491 TATDN3Q17R31 274 aa11.32□□□□□ -0.6
CLCN6-204ENST00000376491 RTL8BQ17RB0 113 aa11.32□□□□□ -0.6
CLCN6-204ENST00000376491 LINC00322Q6ZN03 302 aaPredicted RBP11.32□□□□□ -0.6
CLCN6-204ENST00000376491 IDO2Q6ZQW0 420 aa11.32□□□□□ -0.6
CLCN6-204ENST00000376491 GTSCR1Q86UQ5 136 aa11.32□□□□□ -0.6
CLCN6-204ENST00000376491 Q8N402 240 aa11.32□□□□□ -0.6
CLCN6-204ENST00000376491 SRSF12Q8WXF0 261 aaKnown RBP11.32□□□□□ -0.6
CLCN6-204ENST00000376491 SNAPC3Q92966 411 aa11.32□□□□□ -0.6
CLCN6-204ENST00000376491 TUBA4BQ9H853 241 aa11.32□□□□□ -0.6
CLCN6-204ENST00000376491 RETNQ9HD89 108 aa11.32□□□□□ -0.6
CLCN6-204ENST00000376491 AKIP1Q9NQ31 210 aa11.32□□□□□ -0.6
CLCN6-204ENST00000376491 TPRKBQ9Y3C4 175 aa11.32□□□□□ -0.6
CLCN6-204ENST00000376491 BMPR1BO00238 502 aa11.31□□□□□ -0.6
CLCN6-204ENST00000376491 RGS10O43665 173 aa11.31□□□□□ -0.6
CLCN6-204ENST00000376491 OR2A4O95047 310 aa11.31□□□□□ -0.6
CLCN6-204ENST00000376491 DIRAS3O95661 229 aa11.31□□□□□ -0.6
CLCN6-204ENST00000376491 CRYZL1O95825 349 aa11.31□□□□□ -0.6
CLCN6-204ENST00000376491 MAP2K4P45985 399 aa11.31□□□□□ -0.6
CLCN6-204ENST00000376491 AQP4P55087 323 aa11.31□□□□□ -0.6
CLCN6-204ENST00000376491 OR10A3P58181 314 aa11.31□□□□□ -0.6
CLCN6-204ENST00000376491 MRPS15P82914 257 aaKnown RBP11.31□□□□□ -0.6
CLCN6-204ENST00000376491 RHOGP84095 191 aa11.31□□□□□ -0.6
CLCN6-204ENST00000376491 CBX3Q13185 183 aa11.31□□□□□ -0.6
CLCN6-204ENST00000376491 VMA21Q3ZAQ7 101 aa11.31□□□□□ -0.6
CLCN6-204ENST00000376491 H1FOOQ8IZA3 346 aaPredicted RBP11.31□□□□□ -0.6
CLCN6-204ENST00000376491 OR10R2Q8NGX6 335 aa11.31□□□□□ -0.6
CLCN6-204ENST00000376491 MGLLQ99685 303 aa11.31□□□□□ -0.6
CLCN6-204ENST00000376491 VCXQ9H320 206 aa11.31□□□□□ -0.6
CLCN6-204ENST00000376491 NKX1-2Q9UD57 310 aaPredicted RBP11.31□□□□□ -0.6
CLCN6-204ENST00000376491 RBM7Q9Y580 266 aaKnown RBP11.31□□□□□ -0.6
CLCN6-204ENST00000376491 A0A075B6Q4 140 aa11.3□□□□□ -0.6
CLCN6-204ENST00000376491 TRBV9A0A0B4J1U6 114 aa11.3□□□□□ -0.6
CLCN6-204ENST00000376491 A0A0B4J203 849 aa11.3□□□□□ -0.6
CLCN6-204ENST00000376491 IFNA6P05013 189 aa11.3□□□□□ -0.6
CLCN6-204ENST00000376491 HIST1H1DP16402 221 aaKnown RBP11.3□□□□□ -0.6
CLCN6-204ENST00000376491 EXOSC2Q13868 293 aaKnown RBP11.3□□□□□ -0.6
CLCN6-204ENST00000376491 CD300EQ496F6 205 aaPredicted RBP11.3□□□□□ -0.6
CLCN6-204ENST00000376491 NRG4Q8WWG1 115 aa11.3□□□□□ -0.6
CLCN6-204ENST00000376491 ACOT12Q8WYK0 555 aa11.3□□□□□ -0.6
CLCN6-204ENST00000376491 ADTRPQ96IZ2 230 aa11.3□□□□□ -0.6
CLCN6-204ENST00000376491 HIPK2Q9H2X6 1198 aa11.3□□□□□ -0.6
CLCN6-204ENST00000376491 ZNF430Q9H8G1 570 aaPredicted RBP11.3□□□□□ -0.6
CLCN6-204ENST00000376491 PLEKHA3Q9HB20 300 aa11.3□□□□□ -0.6
CLCN6-204ENST00000376491 ELF5Q9UKW6 265 aaPredicted RBP11.3□□□□□ -0.6
CLCN6-204ENST00000376491 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.29□□□□□ -0.6
CLCN6-204ENST00000376491 ZNF785A8K8V0 405 aa11.29□□□□□ -0.6
CLCN6-204ENST00000376491 SAA1P0DJI8 122 aaPredicted RBP11.29□□□□□ -0.6
CLCN6-204ENST00000376491 EDN2P20800 178 aa11.29□□□□□ -0.6
CLCN6-204ENST00000376491 CRHBPP24387 322 aa11.29□□□□□ -0.6
CLCN6-204ENST00000376491 PSMD7P51665 324 aa11.29□□□□□ -0.6
CLCN6-204ENST00000376491 ATP5G2Q06055 141 aa11.29□□□□□ -0.6
CLCN6-204ENST00000376491 SSX1Q16384 188 aa11.29□□□□□ -0.6
CLCN6-204ENST00000376491 C10orf55Q5SWW7 151 aa11.29□□□□□ -0.6
CLCN6-204ENST00000376491 Q6ZS49 121 aa11.29□□□□□ -0.6
CLCN6-204ENST00000376491 OR2K2Q8NGT1 345 aa11.29□□□□□ -0.6
CLCN6-204ENST00000376491 OSR1Q8TAX0 266 aaPredicted RBP11.29□□□□□ -0.6
CLCN6-204ENST00000376491 FAM110AQ9BQ89 295 aa11.29□□□□□ -0.6
CLCN6-204ENST00000376491 GINS4Q9BRT9 223 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms