RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 TMEM65Q6PI78 240 aa19.38■□□□□ 0.69
SNX3-203ENST00000368979 Q6ZRM9 215 aa19.38■□□□□ 0.69
SNX3-203ENST00000368979 TGIF2LXQ8IUE1 241 aa19.38■□□□□ 0.69
SNX3-203ENST00000368979 OR5AN1Q8NGI8 311 aa19.38■□□□□ 0.69
SNX3-203ENST00000368979 R3HDM4Q96D70 268 aa19.38■□□□□ 0.69
SNX3-203ENST00000368979 LPAR2Q9HBW0 351 aa19.38■□□□□ 0.69
SNX3-203ENST00000368979 SLC35D1Q9NTN3 355 aa19.38■□□□□ 0.69
SNX3-203ENST00000368979 H0YJW9 148 aa19.37■□□□□ 0.69
SNX3-203ENST00000368979 SCGB1D2O95969 90 aa19.37■□□□□ 0.69
SNX3-203ENST00000368979 PET100P0DJ07 73 aa19.37■□□□□ 0.69
SNX3-203ENST00000368979 HOXB4P17483 251 aaPredicted RBP19.37■□□□□ 0.69
SNX3-203ENST00000368979 TAGLNQ01995 201 aaKnown RBP19.37■□□□□ 0.69
SNX3-203ENST00000368979 LGALSLQ3ZCW2 172 aaPredicted RBP19.37■□□□□ 0.69
SNX3-203ENST00000368979 PCGF1Q9BSM1 259 aa19.37■□□□□ 0.69
SNX3-203ENST00000368979 PLSCR3Q9NRY6 295 aa19.37■□□□□ 0.69
SNX3-203ENST00000368979 OR5AC2Q9NZP5 309 aa19.37■□□□□ 0.69
SNX3-203ENST00000368979 CACNG5Q9UF02 275 aa19.37■□□□□ 0.69
SNX3-203ENST00000368979 BOLA1Q9Y3E2 137 aa19.37■□□□□ 0.69
SNX3-203ENST00000368979 ARID1AO14497 2285 aa19.37■□□□□ 0.69
SNX3-203ENST00000368979 MARCH11A6NNE9 402 aa19.36■□□□□ 0.69
SNX3-203ENST00000368979 LY6LH3BQJ8 138 aa19.36■□□□□ 0.69
SNX3-203ENST00000368979 K7EPK0 472 aa19.36■□□□□ 0.69
SNX3-203ENST00000368979 ARPC5O15511 151 aa19.36■□□□□ 0.69
SNX3-203ENST00000368979 TOX4O94842 621 aa19.36■□□□□ 0.69
SNX3-203ENST00000368979 CRYZL1O95825 349 aa19.36■□□□□ 0.69
SNX3-203ENST00000368979 ARG1P05089 322 aa19.36■□□□□ 0.69
SNX3-203ENST00000368979 RTL8BQ17RB0 113 aa19.36■□□□□ 0.69
SNX3-203ENST00000368979 DHRS7BQ6IAN0 325 aaPredicted RBP19.36■□□□□ 0.69
SNX3-203ENST00000368979 FAM71E2Q8N5Q1 922 aa19.36■□□□□ 0.69
SNX3-203ENST00000368979 TBX15Q96SF7 602 aa19.36■□□□□ 0.69
SNX3-203ENST00000368979 ZFP57Q9NU63 452 aa19.36■□□□□ 0.69
SNX3-203ENST00000368979 COA4Q9NYJ1 87 aa19.36■□□□□ 0.69
SNX3-203ENST00000368979 TNFSF18Q9UNG2 199 aa19.36■□□□□ 0.69
SNX3-203ENST00000368979 HSPB11Q9Y547 144 aa19.36■□□□□ 0.69
SNX3-203ENST00000368979 POMT1Q9Y6A1 747 aa19.36■□□□□ 0.69
SNX3-203ENST00000368979 NAV2Q8IVL1 2488 aa19.36■□□□□ 0.69
SNX3-203ENST00000368979 TACC2O95359 2948 aa19.36■□□□□ 0.69
SNX3-203ENST00000368979 RNASEK-C17orf49H0YIS7 233 aa19.35■□□□□ 0.69
SNX3-203ENST00000368979 DEDDO75618 318 aa19.35■□□□□ 0.69
SNX3-203ENST00000368979 APOA2P02652 100 aa19.35■□□□□ 0.69
SNX3-203ENST00000368979 RRASP10301 218 aa19.35■□□□□ 0.69
SNX3-203ENST00000368979 CXCL2P19875 107 aa19.35■□□□□ 0.69
SNX3-203ENST00000368979 MIDNQ504T8 468 aa19.35■□□□□ 0.69
SNX3-203ENST00000368979 ZNF546Q86UE3 836 aa19.35■□□□□ 0.69
SNX3-203ENST00000368979 OR1S1Q8NH92 325 aa19.35■□□□□ 0.69
SNX3-203ENST00000368979 C1orf159Q96HA4 380 aa19.35■□□□□ 0.69
SNX3-203ENST00000368979 LSM5Q9Y4Y9 91 aaKnown RBP19.35■□□□□ 0.69
SNX3-203ENST00000368979 ST8SIA3O43173 380 aa19.35■□□□□ 0.69
SNX3-203ENST00000368979 TXNL1O43396 289 aa19.35■□□□□ 0.69
SNX3-203ENST00000368979 NQO2P16083 231 aa19.35■□□□□ 0.69
SNX3-203ENST00000368979 NKX2-1P43699 371 aaPredicted RBP19.35■□□□□ 0.69
SNX3-203ENST00000368979 ID3Q02535 119 aa19.35■□□□□ 0.69
SNX3-203ENST00000368979 PAX8Q06710 450 aa19.35■□□□□ 0.69
SNX3-203ENST00000368979 Q5PR19 223 aa19.35■□□□□ 0.69
SNX3-203ENST00000368979 SPG11Q96JI7 2443 aa19.35■□□□□ 0.69
SNX3-203ENST00000368979 SNAPC5O75971 98 aa19.34■□□□□ 0.69
SNX3-203ENST00000368979 CXorf66Q5JRM2 361 aaPredicted RBP19.34■□□□□ 0.69
SNX3-203ENST00000368979 LDLRAD2Q5SZI1 272 aa19.34■□□□□ 0.69
SNX3-203ENST00000368979 H2BFWTQ7Z2G1 175 aa19.34■□□□□ 0.69
SNX3-203ENST00000368979 FOXRED2Q8IWF2 684 aa19.34■□□□□ 0.69
SNX3-203ENST00000368979 RCL1Q9Y2P8 373 aaKnown RBP19.34■□□□□ 0.69
SNX3-203ENST00000368979 CELSR2Q9HCU4 2923 aa19.34■□□□□ 0.69
SNX3-203ENST00000368979 GAPDHP04406 335 aaKnown RBP19.33■□□□□ 0.68
SNX3-203ENST00000368979 IGKV1-16P04430 117 aa19.33■□□□□ 0.68
SNX3-203ENST00000368979 HTR1DP28221 377 aa19.33■□□□□ 0.68
SNX3-203ENST00000368979 POU2AF1Q16633 256 aa19.33■□□□□ 0.68
SNX3-203ENST00000368979 PRSS57Q6UWY2 283 aa19.33■□□□□ 0.68
SNX3-203ENST00000368979 PDPNQ86YL7 162 aa19.33■□□□□ 0.68
SNX3-203ENST00000368979 DCUN1D4Q92564 292 aa19.33■□□□□ 0.68
SNX3-203ENST00000368979 ABCA2Q9BZC7 2435 aa19.33■□□□□ 0.68
SNX3-203ENST00000368979 RNF222A6NCQ9 220 aa19.32■□□□□ 0.68
SNX3-203ENST00000368979 FAM90A9PA6NNJ1 464 aa19.32■□□□□ 0.68
SNX3-203ENST00000368979 LEUTXA8MZ59 168 aa19.32■□□□□ 0.68
SNX3-203ENST00000368979 RLN2P04090 185 aa19.32■□□□□ 0.68
SNX3-203ENST00000368979 MSMBP08118 114 aa19.32■□□□□ 0.68
SNX3-203ENST00000368979 ERVK-16P61578 105 aa19.32■□□□□ 0.68
SNX3-203ENST00000368979 TPTE2P1Q5T6R2 138 aa19.32■□□□□ 0.68
SNX3-203ENST00000368979 KRTAP1-3Q8IUG1 177 aa19.32■□□□□ 0.68
SNX3-203ENST00000368979 DMBX1Q8NFW5 382 aa19.32■□□□□ 0.68
SNX3-203ENST00000368979 RPEQ96AT9 228 aa19.32■□□□□ 0.68
SNX3-203ENST00000368979 RBMXL1Q96E39 390 aaKnown RBP19.32■□□□□ 0.68
SNX3-203ENST00000368979 MFFQ9GZY8 342 aa19.32■□□□□ 0.68
SNX3-203ENST00000368979 C11orf1Q9H5F2 150 aa19.32■□□□□ 0.68
SNX3-203ENST00000368979 DPM3Q9P2X0 92 aa19.32■□□□□ 0.68
SNX3-203ENST00000368979 IGHV1-3A0A0C4DH29 117 aa19.31■□□□□ 0.68
SNX3-203ENST00000368979 L7N2F9 121 aa19.31■□□□□ 0.68
SNX3-203ENST00000368979 ARHGDIBP52566 201 aa19.31■□□□□ 0.68
SNX3-203ENST00000368979 LOXL1Q08397 574 aaPredicted RBP19.31■□□□□ 0.68
SNX3-203ENST00000368979 ZNF345Q14585 488 aa19.31■□□□□ 0.68
SNX3-203ENST00000368979 TMEM177Q53S58 311 aa19.31■□□□□ 0.68
SNX3-203ENST00000368979 OSR1Q8TAX0 266 aaPredicted RBP19.31■□□□□ 0.68
SNX3-203ENST00000368979 WASHC3Q9Y3C0 194 aa19.31■□□□□ 0.68
SNX3-203ENST00000368979 B4DSR2 109 aa19.3■□□□□ 0.68
SNX3-203ENST00000368979 H7C2Y5 167 aa19.3■□□□□ 0.68
SNX3-203ENST00000368979 HRASP01112 189 aa19.3■□□□□ 0.68
SNX3-203ENST00000368979 OR9G9P0C7N8 305 aa19.3■□□□□ 0.68
SNX3-203ENST00000368979 MC5RP33032 325 aa19.3■□□□□ 0.68
SNX3-203ENST00000368979 CEACAM3P40198 252 aa19.3■□□□□ 0.68
SNX3-203ENST00000368979 RAB13P51153 203 aa19.3■□□□□ 0.68
SNX3-203ENST00000368979 POLR2GP62487 172 aaKnown RBP eCLIP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms