RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 FXYD6Q9H0Q3 95 aa16.5■□□□□ 0.23
SMARCB1-202ENST00000344921 RRHO14718 337 aa16.5■□□□□ 0.23
SMARCB1-202ENST00000344921 CRYZL1O95825 349 aa16.5■□□□□ 0.23
SMARCB1-202ENST00000344921 PTBP1P26599 531 aaKnown RBP eCLIP16.5■□□□□ 0.232e-9■■■■■ 39.5
SMARCB1-202ENST00000344921 GNRHRP30968 328 aa16.5■□□□□ 0.23
SMARCB1-202ENST00000344921 RPL30P62888 115 aaKnown RBP16.5■□□□□ 0.23
SMARCB1-202ENST00000344921 SRSF4Q08170 494 aaKnown RBP16.5■□□□□ 0.23
SMARCB1-202ENST00000344921 LIN54Q6MZP7 749 aa16.5■□□□□ 0.23
SMARCB1-202ENST00000344921 ARRDC1Q8N5I2 433 aa16.5■□□□□ 0.23
SMARCB1-202ENST00000344921 FBXL15Q9H469 300 aa16.5■□□□□ 0.23
SMARCB1-202ENST00000344921 NDUFA3O95167 84 aa16.49■□□□□ 0.23
SMARCB1-202ENST00000344921 CD74P04233 296 aa16.49■□□□□ 0.23
SMARCB1-202ENST00000344921 AKAIN1P0CW23 69 aa16.49■□□□□ 0.23
SMARCB1-202ENST00000344921 ETV6P41212 452 aa16.49■□□□□ 0.23
SMARCB1-202ENST00000344921 C5orf64Q2M2E5 130 aa16.49■□□□□ 0.23
SMARCB1-202ENST00000344921 SCGB2B2Q4G0G5 96 aa16.49■□□□□ 0.23
SMARCB1-202ENST00000344921 LPCAT3Q6P1A2 487 aa16.49■□□□□ 0.23
SMARCB1-202ENST00000344921 SHISA2Q6UWI4 295 aa16.49■□□□□ 0.23
SMARCB1-202ENST00000344921 CENPVQ7Z7K6 275 aaPredicted RBP16.49■□□□□ 0.23
SMARCB1-202ENST00000344921 CMTM1Q8IZ96 169 aa16.49■□□□□ 0.23
SMARCB1-202ENST00000344921 METTL1Q9UBP6 276 aaKnown RBP16.49■□□□□ 0.23
SMARCB1-202ENST00000344921 IGHG2P01859 326 aa16.48■□□□□ 0.23
SMARCB1-202ENST00000344921 LGALS7P47929 136 aa16.48■□□□□ 0.23
SMARCB1-202ENST00000344921 CATR1Q13166 79 aa16.48■□□□□ 0.23
SMARCB1-202ENST00000344921 MEF2DQ14814 521 aa16.48■□□□□ 0.23
SMARCB1-202ENST00000344921 ZNF79Q15937 498 aa16.48■□□□□ 0.23
SMARCB1-202ENST00000344921 FAAP20Q6NZ36 180 aa16.48■□□□□ 0.23
SMARCB1-202ENST00000344921 FOXRED2Q8IWF2 684 aa16.48■□□□□ 0.23
SMARCB1-202ENST00000344921 KCNAB3O43448 404 aa16.48■□□□□ 0.23
SMARCB1-202ENST00000344921 S100GP29377 79 aa16.48■□□□□ 0.23
SMARCB1-202ENST00000344921 EIF4EBP1Q13541 118 aaPredicted RBP16.48■□□□□ 0.23
SMARCB1-202ENST00000344921 PSG5Q15238 335 aa16.48■□□□□ 0.23
SMARCB1-202ENST00000344921 TMEM177Q53S58 311 aa16.48■□□□□ 0.23
SMARCB1-202ENST00000344921 AADACL3Q5VUY0 350 aa16.48■□□□□ 0.23
SMARCB1-202ENST00000344921 OR51H1Q8NH63 302 aa16.48■□□□□ 0.23
SMARCB1-202ENST00000344921 CLCC1Q96S66 551 aa16.48■□□□□ 0.23
SMARCB1-202ENST00000344921 LINC00527Q9UJ94 153 aa16.48■□□□□ 0.23
SMARCB1-202ENST00000344921 ANKRD20A5PA0PJZ0 165 aa16.47■□□□□ 0.23
SMARCB1-202ENST00000344921 DISC1C4P0D8 188 aa16.47■□□□□ 0.23
SMARCB1-202ENST00000344921 GPR31O00270 319 aa16.47■□□□□ 0.23
SMARCB1-202ENST00000344921 SLC25A17O43808 307 aa16.47■□□□□ 0.23
SMARCB1-202ENST00000344921 PGAM2P15259 253 aa16.47■□□□□ 0.23
SMARCB1-202ENST00000344921 KRTAP10-3P60369 221 aa16.47■□□□□ 0.23
SMARCB1-202ENST00000344921 C11orf44Q8N8P7 122 aa16.47■□□□□ 0.23
SMARCB1-202ENST00000344921 OR4S2Q8NH73 311 aa16.47■□□□□ 0.23
SMARCB1-202ENST00000344921 HSPB9Q9BQS6 159 aa16.47■□□□□ 0.23
SMARCB1-202ENST00000344921 LINC01548A6NM66 108 aa16.46■□□□□ 0.23
SMARCB1-202ENST00000344921 PFDN1O60925 122 aa16.46■□□□□ 0.23
SMARCB1-202ENST00000344921 SPDEFO95238 335 aa16.46■□□□□ 0.23
SMARCB1-202ENST00000344921 RLN1P04808 185 aa16.46■□□□□ 0.23
SMARCB1-202ENST00000344921 PHLDA2Q53GA4 152 aa16.46■□□□□ 0.23
SMARCB1-202ENST00000344921 SLC38A6Q8IZM9 456 aa16.46■□□□□ 0.23
SMARCB1-202ENST00000344921 POC5Q8NA72 575 aa16.46■□□□□ 0.23
SMARCB1-202ENST00000344921 OR4C16Q8NGL9 310 aa16.46■□□□□ 0.23
SMARCB1-202ENST00000344921 OSR1Q8TAX0 266 aaPredicted RBP16.46■□□□□ 0.23
SMARCB1-202ENST00000344921 NOL4LQ96MY1 436 aaPredicted RBP16.46■□□□□ 0.23
SMARCB1-202ENST00000344921 WNT10AQ9GZT5 417 aa16.46■□□□□ 0.23
SMARCB1-202ENST00000344921 HLA-DRB1P01911 266 aa16.45■□□□□ 0.22
SMARCB1-202ENST00000344921 KIR2DS2P43631 304 aa16.45■□□□□ 0.22
SMARCB1-202ENST00000344921 PPP5CP53041 499 aa16.45■□□□□ 0.22
SMARCB1-202ENST00000344921 UCP3P55916 312 aa16.45■□□□□ 0.22
SMARCB1-202ENST00000344921 SPAG16Q8N0X2 631 aa16.45■□□□□ 0.22
SMARCB1-202ENST00000344921 TOMM5Q8N4H5 51 aa16.45■□□□□ 0.22
SMARCB1-202ENST00000344921 TERB2Q8NHR7 220 aa16.45■□□□□ 0.22
SMARCB1-202ENST00000344921 MCUBQ9NWR8 336 aa16.45■□□□□ 0.22
SMARCB1-202ENST00000344921 AP4M1O00189 453 aa16.45■□□□□ 0.22
SMARCB1-202ENST00000344921 PGLYRP1O75594 196 aaPredicted RBP16.45■□□□□ 0.22
SMARCB1-202ENST00000344921 AP3S2P59780 193 aa16.45■□□□□ 0.22
SMARCB1-202ENST00000344921 VMA21Q3ZAQ7 101 aa16.45■□□□□ 0.22
SMARCB1-202ENST00000344921 OR5AU1Q8NGC0 362 aa16.45■□□□□ 0.22
SMARCB1-202ENST00000344921 RSRP1Q9BUV0 290 aa16.45■□□□□ 0.22
SMARCB1-202ENST00000344921 SRRM4A7MD48 611 aaKnown RBP16.44■□□□□ 0.22
SMARCB1-202ENST00000344921 IGLV2-23P01705 113 aa16.44■□□□□ 0.22
SMARCB1-202ENST00000344921 INPP1P49441 399 aa16.44■□□□□ 0.22
SMARCB1-202ENST00000344921 LHFPL1Q86WI0 220 aa16.44■□□□□ 0.22
SMARCB1-202ENST00000344921 CHPT1Q8WUD6 406 aa16.44■□□□□ 0.22
SMARCB1-202ENST00000344921 CITED1Q99966 193 aa16.44■□□□□ 0.22
SMARCB1-202ENST00000344921 SRRQ9GZT4 340 aa16.44■□□□□ 0.22
SMARCB1-202ENST00000344921 PARP11Q9NR21 331 aa16.44■□□□□ 0.22
SMARCB1-202ENST00000344921 FCN1O00602 326 aa16.43■□□□□ 0.22
SMARCB1-202ENST00000344921 ZNF735P0CB33 412 aa16.43■□□□□ 0.22
SMARCB1-202ENST00000344921 PPP1R27Q86WC6 154 aa16.43■□□□□ 0.22
SMARCB1-202ENST00000344921 STPG2Q8N412 459 aa16.43■□□□□ 0.22
SMARCB1-202ENST00000344921 ABHD5Q8WTS1 349 aa16.43■□□□□ 0.22
SMARCB1-202ENST00000344921 TRIM63Q969Q1 353 aa16.43■□□□□ 0.22
SMARCB1-202ENST00000344921 OR51J1Q9H342 316 aa16.43■□□□□ 0.22
SMARCB1-202ENST00000344921 TPSG1Q9NRR2 321 aa16.43■□□□□ 0.22
SMARCB1-202ENST00000344921 IGHV7-81A0A0B4J1V7 117 aa16.42■□□□□ 0.22
SMARCB1-202ENST00000344921 PSMB11A5LHX3 300 aa16.42■□□□□ 0.22
SMARCB1-202ENST00000344921 RAMP3O60896 148 aa16.42■□□□□ 0.22
SMARCB1-202ENST00000344921 FAUP35544 74 aaKnown RBP16.42■□□□□ 0.22
SMARCB1-202ENST00000344921 BRWD1-AS2P59051 145 aa16.42■□□□□ 0.22
SMARCB1-202ENST00000344921 ZNF45Q02386 682 aa16.42■□□□□ 0.22
SMARCB1-202ENST00000344921 ZNF57Q68EA5 555 aaPredicted RBP16.42■□□□□ 0.22
SMARCB1-202ENST00000344921 ZNF329Q86UD4 541 aa16.42■□□□□ 0.22
SMARCB1-202ENST00000344921 GDPD1Q8N9F7 314 aa16.42■□□□□ 0.22
SMARCB1-202ENST00000344921 OR51S1Q8NGJ8 323 aa16.42■□□□□ 0.22
SMARCB1-202ENST00000344921 ZFAND1Q8TCF1 268 aa16.42■□□□□ 0.22
SMARCB1-202ENST00000344921 CD300LFQ8TDQ1 290 aa16.42■□□□□ 0.22
SMARCB1-202ENST00000344921 PRRT1Q99946 306 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms