RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 ZNF818PQ6ZRF7 136 aa12.01□□□□□ -0.49
UBE3B-201ENST00000340074 OR4X2Q8NGF9 303 aa12.01□□□□□ -0.49
UBE3B-201ENST00000340074 OR6F1Q8NGZ6 308 aa12.01□□□□□ -0.49
UBE3B-201ENST00000340074 MOB3AQ96BX8 217 aa12.01□□□□□ -0.49
UBE3B-201ENST00000340074 CLCC1Q96S66 551 aa12.01□□□□□ -0.49
UBE3B-201ENST00000340074 TPSG1Q9NRR2 321 aa12.01□□□□□ -0.49
UBE3B-201ENST00000340074 TNCP24821 2201 aa12□□□□□ -0.49
UBE3B-201ENST00000340074 SRRM4A7MD48 611 aaKnown RBP12□□□□□ -0.49
UBE3B-201ENST00000340074 ATP6V0E1O15342 81 aa12□□□□□ -0.49
UBE3B-201ENST00000340074 TSPAN15O95858 294 aa12□□□□□ -0.49
UBE3B-201ENST00000340074 LGALS7P47929 136 aa12□□□□□ -0.49
UBE3B-201ENST00000340074 TSPAN5P62079 268 aa12□□□□□ -0.49
UBE3B-201ENST00000340074 SLC35B1P78383 322 aa12□□□□□ -0.49
UBE3B-201ENST00000340074 MSMO1Q15800 293 aa12□□□□□ -0.49
UBE3B-201ENST00000340074 PYHIN1Q6K0P9 492 aa12□□□□□ -0.49
UBE3B-201ENST00000340074 ZNF66Q6ZN08 573 aa12□□□□□ -0.49
UBE3B-201ENST00000340074 NDUFA11Q86Y39 141 aa12□□□□□ -0.49
UBE3B-201ENST00000340074 MFSD4AQ8N468 514 aa12□□□□□ -0.49
UBE3B-201ENST00000340074 TCTEX1D2Q8WW35 142 aa12□□□□□ -0.49
UBE3B-201ENST00000340074 OR51J1Q9H342 316 aa12□□□□□ -0.49
UBE3B-201ENST00000340074 PARP11Q9NR21 331 aa12□□□□□ -0.49
UBE3B-201ENST00000340074 PRELID3BQ9Y3B1 194 aa12□□□□□ -0.49
UBE3B-201ENST00000340074 ADARB2-AS1A8MUL3 147 aa11.99□□□□□ -0.49
UBE3B-201ENST00000340074 M0QYG6 137 aa11.99□□□□□ -0.49
UBE3B-201ENST00000340074 IGF1P05019 195 aa11.99□□□□□ -0.49
UBE3B-201ENST00000340074 CSF1P09603 554 aa11.99□□□□□ -0.49
UBE3B-201ENST00000340074 GNRHRP30968 328 aa11.99□□□□□ -0.49
UBE3B-201ENST00000340074 MRPS10P82664 201 aaKnown RBP11.99□□□□□ -0.49
UBE3B-201ENST00000340074 NDPQ00604 133 aa11.99□□□□□ -0.49
UBE3B-201ENST00000340074 ACTBL2Q562R1 376 aa11.99□□□□□ -0.49
UBE3B-201ENST00000340074 VAX1Q5SQQ9 334 aa11.99□□□□□ -0.49
UBE3B-201ENST00000340074 ZBTB34Q8NCN2 500 aa11.99□□□□□ -0.49
UBE3B-201ENST00000340074 GON7Q9BXV9 100 aa11.99□□□□□ -0.49
UBE3B-201ENST00000340074 FXYD6Q9H0Q3 95 aa11.99□□□□□ -0.49
UBE3B-201ENST00000340074 MMP27Q9H306 513 aa11.99□□□□□ -0.49
UBE3B-201ENST00000340074 RABL2AQ9UBK7 228 aaPredicted RBP11.99□□□□□ -0.49
UBE3B-201ENST00000340074 RABL2BQ9UNT1 228 aa11.99□□□□□ -0.49
UBE3B-201ENST00000340074 A0A1W2PRX2 142 aa11.98□□□□□ -0.49
UBE3B-201ENST00000340074 TCRBV4S1A1TA0A5B7 111 aa11.98□□□□□ -0.49
UBE3B-201ENST00000340074 DPPA5A6NC42 116 aa11.98□□□□□ -0.49
UBE3B-201ENST00000340074 FABP12A6NFH5 140 aa11.98□□□□□ -0.49
UBE3B-201ENST00000340074 CTDSPLO15194 276 aa11.98□□□□□ -0.49
UBE3B-201ENST00000340074 CA2P00918 260 aa11.98□□□□□ -0.49
UBE3B-201ENST00000340074 CD3DP04234 171 aa11.98□□□□□ -0.49
UBE3B-201ENST00000340074 CRYGBP07316 175 aa11.98□□□□□ -0.49
UBE3B-201ENST00000340074 BRWD1-AS2P59051 145 aa11.98□□□□□ -0.49
UBE3B-201ENST00000340074 CX3CL1P78423 397 aa11.98□□□□□ -0.49
UBE3B-201ENST00000340074 PPP1R27Q86WC6 154 aa11.98□□□□□ -0.49
UBE3B-201ENST00000340074 OSR1Q8TAX0 266 aaPredicted RBP11.98□□□□□ -0.49
UBE3B-201ENST00000340074 SMIM4Q8WVI0 70 aa11.98□□□□□ -0.49
UBE3B-201ENST00000340074 SOSTQ9BQB4 213 aa11.98□□□□□ -0.49
UBE3B-201ENST00000340074 TINAGL1Q9GZM7 467 aaPredicted RBP11.98□□□□□ -0.49
UBE3B-201ENST00000340074 ZNF580Q9UK33 172 aa11.98□□□□□ -0.49
UBE3B-201ENST00000340074 FBXO7Q9Y3I1 522 aa11.98□□□□□ -0.49
UBE3B-201ENST00000340074 WSB1Q9Y6I7 421 aa11.98□□□□□ -0.49
UBE3B-201ENST00000340074 NBEAL1Q6ZS30 2694 aa11.98□□□□□ -0.49
UBE3B-201ENST00000340074 G3V318 75 aa11.97□□□□□ -0.49
UBE3B-201ENST00000340074 VDAC1P21796 283 aa11.97□□□□□ -0.49
UBE3B-201ENST00000340074 CFHR3Q02985 330 aa11.97□□□□□ -0.49
UBE3B-201ENST00000340074 RNASE10Q5GAN6 216 aaKnown RBP11.97□□□□□ -0.49
UBE3B-201ENST00000340074 KHDC1LQ5JSQ8 128 aa11.97□□□□□ -0.49
UBE3B-201ENST00000340074 FOXB2Q5VYV0 432 aa11.97□□□□□ -0.49
UBE3B-201ENST00000340074 TREML4Q6UXN2 200 aa11.97□□□□□ -0.49
UBE3B-201ENST00000340074 COMMD1Q8N668 190 aa11.97□□□□□ -0.49
UBE3B-201ENST00000340074 TMEM229BQ8NBD8 167 aa11.97□□□□□ -0.49
UBE3B-201ENST00000340074 OR4D10Q8NGI6 311 aa11.97□□□□□ -0.49
UBE3B-201ENST00000340074 OR4S2Q8NH73 311 aa11.97□□□□□ -0.49
UBE3B-201ENST00000340074 BORCS5Q969J3 196 aa11.97□□□□□ -0.49
UBE3B-201ENST00000340074 DGCR14Q96DF8 476 aaKnown RBP11.97□□□□□ -0.49
UBE3B-201ENST00000340074 TSSC4Q9Y5U2 329 aaPredicted RBP11.97□□□□□ -0.49
UBE3B-201ENST00000340074 A3GALT2U3KPV4 340 aa11.97□□□□□ -0.49
UBE3B-201ENST00000340074 CMYA5Q8N3K9 4069 aa11.97□□□□□ -0.49
UBE3B-201ENST00000340074 RAMP3O60896 148 aa11.96□□□□□ -0.49
UBE3B-201ENST00000340074 OPN1MWP04001 364 aa11.96□□□□□ -0.49
UBE3B-201ENST00000340074 IFNA6P05013 189 aa11.96□□□□□ -0.49
UBE3B-201ENST00000340074 OPN1MW2P0DN77 364 aa11.96□□□□□ -0.49
UBE3B-201ENST00000340074 OPN1MW3P0DN78 364 aa11.96□□□□□ -0.49
UBE3B-201ENST00000340074 S100A5P33763 92 aa11.96□□□□□ -0.49
UBE3B-201ENST00000340074 TAS2R19P59542 299 aa11.96□□□□□ -0.49
UBE3B-201ENST00000340074 UBE2KP61086 200 aa11.96□□□□□ -0.49
UBE3B-201ENST00000340074 SSBP1Q04837 148 aaKnown RBP11.96□□□□□ -0.49
UBE3B-201ENST00000340074 PJVKQ0ZLH3 352 aa11.96□□□□□ -0.49
UBE3B-201ENST00000340074 VMA21Q3ZAQ7 101 aa11.96□□□□□ -0.49
UBE3B-201ENST00000340074 TEX38Q6PEX7 206 aa11.96□□□□□ -0.49
UBE3B-201ENST00000340074 ZNF562Q6V9R5 426 aa11.96□□□□□ -0.49
UBE3B-201ENST00000340074 IDO2Q6ZQW0 420 aa11.96□□□□□ -0.49
UBE3B-201ENST00000340074 ABHD5Q8WTS1 349 aa11.96□□□□□ -0.49
UBE3B-201ENST00000340074 FAM103A1Q9BTL3 118 aaKnown RBP11.96□□□□□ -0.49
UBE3B-201ENST00000340074 NDUFA13Q9P0J0 144 aa11.96□□□□□ -0.49
UBE3B-201ENST00000340074 TRAV41A0A0B4J266 112 aa11.95□□□□□ -0.5
UBE3B-201ENST00000340074 ARPC1BO15143 372 aaKnown RBP11.95□□□□□ -0.5
UBE3B-201ENST00000340074 CD74P04233 296 aa11.95□□□□□ -0.5
UBE3B-201ENST00000340074 EGR2P11161 476 aaPredicted RBP11.95□□□□□ -0.5
UBE3B-201ENST00000340074 TBPP20226 339 aa11.95□□□□□ -0.5
UBE3B-201ENST00000340074 KIR2DS2P43631 304 aa11.95□□□□□ -0.5
UBE3B-201ENST00000340074 GNB1P62873 340 aa11.95□□□□□ -0.5
UBE3B-201ENST00000340074 SSBP2P81877 361 aaPredicted RBP11.95□□□□□ -0.5
UBE3B-201ENST00000340074 CATR1Q13166 79 aa11.95□□□□□ -0.5
UBE3B-201ENST00000340074 ECSCRQ19T08 205 aa11.95□□□□□ -0.5
UBE3B-201ENST00000340074 MRGPRG-AS1Q2M3A8 158 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms