RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 HIST1H2BLQ99880 126 aa12.63□□□□□ -0.39
CSDC2-201ENST00000306149 FAM234AQ9H0X4 552 aa12.63□□□□□ -0.39
CSDC2-201ENST00000306149 CTXND1A0A1B0GTU2 59 aa12.63□□□□□ -0.39
CSDC2-201ENST00000306149 PFN1P07737 140 aaKnown RBP12.63□□□□□ -0.39
CSDC2-201ENST00000306149 CECR9P0C854 216 aa12.63□□□□□ -0.39
CSDC2-201ENST00000306149 RNF224P0DH78 156 aa12.63□□□□□ -0.39
CSDC2-201ENST00000306149 HOXC12P31275 282 aa12.63□□□□□ -0.39
CSDC2-201ENST00000306149 GPX4P36969 197 aaPredicted RBP12.63□□□□□ -0.39
CSDC2-201ENST00000306149 ATP6V1FQ16864 119 aa12.63□□□□□ -0.39
CSDC2-201ENST00000306149 H2BFWTQ7Z2G1 175 aa12.63□□□□□ -0.39
CSDC2-201ENST00000306149 C16orf82Q7Z2V1 217 aa12.63□□□□□ -0.39
CSDC2-201ENST00000306149 OR10G9Q8NGN4 311 aa12.63□□□□□ -0.39
CSDC2-201ENST00000306149 OR10G7Q8NGN6 311 aa12.63□□□□□ -0.39
CSDC2-201ENST00000306149 HCFC1P51610 2035 aa12.62□□□□□ -0.39
CSDC2-201ENST00000306149 CATR1Q13166 79 aa12.62□□□□□ -0.39
CSDC2-201ENST00000306149 FFAR4Q5NUL3 377 aa12.62□□□□□ -0.39
CSDC2-201ENST00000306149 SSX9Q7RTT3 188 aa12.62□□□□□ -0.39
CSDC2-201ENST00000306149 TGIF2LYQ8IUE0 185 aa12.62□□□□□ -0.39
CSDC2-201ENST00000306149 TMEM183AQ8IXX5 376 aa12.62□□□□□ -0.39
CSDC2-201ENST00000306149 OR10P1Q8NGE3 313 aa12.62□□□□□ -0.39
CSDC2-201ENST00000306149 OR4X1Q8NH49 305 aa12.62□□□□□ -0.39
CSDC2-201ENST00000306149 OR5R1Q8NH85 324 aa12.62□□□□□ -0.39
CSDC2-201ENST00000306149 TMEM147Q9BVK8 224 aa12.62□□□□□ -0.39
CSDC2-201ENST00000306149 MANBALQ9NQG1 85 aa12.62□□□□□ -0.39
CSDC2-201ENST00000306149 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.62□□□□□ -0.39
CSDC2-201ENST00000306149 PMS2P5A8MQ11 134 aa12.62□□□□□ -0.39
CSDC2-201ENST00000306149 MBP02144 154 aa12.62□□□□□ -0.39
CSDC2-201ENST00000306149 PSMB3P49720 205 aa12.62□□□□□ -0.39
CSDC2-201ENST00000306149 GAMTQ14353 236 aa12.62□□□□□ -0.39
CSDC2-201ENST00000306149 RTP5Q14D33 572 aa12.62□□□□□ -0.39
CSDC2-201ENST00000306149 BSXQ3C1V8 233 aa12.62□□□□□ -0.39
CSDC2-201ENST00000306149 CXXC4Q9H2H0 198 aa12.62□□□□□ -0.39
CSDC2-201ENST00000306149 C1QTNF9BB2RNN3 333 aa12.61□□□□□ -0.39
CSDC2-201ENST00000306149 IGKV3-15P01624 115 aa12.61□□□□□ -0.39
CSDC2-201ENST00000306149 RPL23P62829 140 aaKnown RBP12.61□□□□□ -0.39
CSDC2-201ENST00000306149 CD177Q8N6Q3 437 aa12.61□□□□□ -0.39
CSDC2-201ENST00000306149 S100PBPQ96BU1 408 aa12.61□□□□□ -0.39
CSDC2-201ENST00000306149 ROS1P08922 2347 aa12.61□□□□□ -0.39
CSDC2-201ENST00000306149 SMCO3A2RU48 225 aa12.61□□□□□ -0.39
CSDC2-201ENST00000306149 PKIAP61925 76 aa12.61□□□□□ -0.39
CSDC2-201ENST00000306149 GCSAMLQ5JQS6 135 aa12.61□□□□□ -0.39
CSDC2-201ENST00000306149 VKORC1L1Q8N0U8 176 aa12.61□□□□□ -0.39
CSDC2-201ENST00000306149 OR4F5Q8NH21 305 aa12.61□□□□□ -0.39
CSDC2-201ENST00000306149 OR4F4Q96R69 305 aa12.61□□□□□ -0.39
CSDC2-201ENST00000306149 PLCE1Q9P212 2302 aa12.61□□□□□ -0.39
CSDC2-201ENST00000306149 TUBG1P23258 451 aa12.6□□□□□ -0.39
CSDC2-201ENST00000306149 OR5T1Q8NG75 326 aa12.6□□□□□ -0.39
CSDC2-201ENST00000306149 LRRC29Q8WV35 223 aa12.6□□□□□ -0.39
CSDC2-201ENST00000306149 RAB24Q969Q5 203 aa12.6□□□□□ -0.39
CSDC2-201ENST00000306149 QTRT1Q9BXR0 403 aaKnown RBP12.6□□□□□ -0.39
CSDC2-201ENST00000306149 PARLQ9H300 379 aa12.6□□□□□ -0.39
CSDC2-201ENST00000306149 GVINP1Q7Z2Y8 2422 aa12.6□□□□□ -0.39
CSDC2-201ENST00000306149 MARCH11A6NNE9 402 aa12.6□□□□□ -0.39
CSDC2-201ENST00000306149 PROP1O75360 226 aa12.6□□□□□ -0.39
CSDC2-201ENST00000306149 CLDN14O95500 239 aa12.6□□□□□ -0.39
CSDC2-201ENST00000306149 LY86O95711 162 aa12.6□□□□□ -0.39
CSDC2-201ENST00000306149 WT1P19544 449 aaPredicted RBP12.6□□□□□ -0.39
CSDC2-201ENST00000306149 BTF3P20290 206 aaKnown RBP12.6□□□□□ -0.39
CSDC2-201ENST00000306149 OR51G1Q8NGK1 321 aa12.6□□□□□ -0.39
CSDC2-201ENST00000306149 NPCDR1Q9BY65 106 aa12.6□□□□□ -0.39
CSDC2-201ENST00000306149 MRPL37Q9BZE1 423 aaKnown RBP12.6□□□□□ -0.39
CSDC2-201ENST00000306149 OPN3Q9H1Y3 402 aaPredicted RBP12.6□□□□□ -0.39
CSDC2-201ENST00000306149 PTPRBP23467 1997 aa12.59□□□□□ -0.39
CSDC2-201ENST00000306149 IFNA10P01566 189 aa12.59□□□□□ -0.39
CSDC2-201ENST00000306149 OR9G9P0C7N8 305 aa12.59□□□□□ -0.39
CSDC2-201ENST00000306149 EGR1P18146 543 aa12.59□□□□□ -0.39
CSDC2-201ENST00000306149 SSTP61278 116 aa12.59□□□□□ -0.39
CSDC2-201ENST00000306149 TRIP6Q15654 476 aaKnown RBP12.59□□□□□ -0.39
CSDC2-201ENST00000306149 COA6Q5JTJ3 125 aaKnown RBP12.59□□□□□ -0.39
CSDC2-201ENST00000306149 OR2Z1Q8NG97 314 aa12.59□□□□□ -0.39
CSDC2-201ENST00000306149 RNASEH2CQ8TDP1 164 aaKnown RBP12.59□□□□□ -0.39
CSDC2-201ENST00000306149 C14orf144Q96I85 54 aa12.59□□□□□ -0.39
CSDC2-201ENST00000306149 DUSP13Q9UII6 198 aa12.59□□□□□ -0.39
CSDC2-201ENST00000306149 GAB2Q9UQC2 676 aa12.59□□□□□ -0.39
CSDC2-201ENST00000306149 IGHV3OR15-7A0A075B7D8 119 aa12.59□□□□□ -0.39
CSDC2-201ENST00000306149 H7BYZ3 331 aa12.59□□□□□ -0.39
CSDC2-201ENST00000306149 PAGE4O60829 102 aa12.59□□□□□ -0.39
CSDC2-201ENST00000306149 FCGR3BO75015 233 aa12.59□□□□□ -0.39
CSDC2-201ENST00000306149 GALR1P47211 349 aa12.59□□□□□ -0.39
CSDC2-201ENST00000306149 VWC2Q2TAL6 325 aa12.59□□□□□ -0.39
CSDC2-201ENST00000306149 LRP11Q86VZ4 500 aa12.59□□□□□ -0.39
CSDC2-201ENST00000306149 OR5B12Q96R08 314 aa12.59□□□□□ -0.39
CSDC2-201ENST00000306149 TSTD3H0UI37 97 aa12.58□□□□□ -0.39
CSDC2-201ENST00000306149 DVL1O14640 695 aa12.58□□□□□ -0.39
CSDC2-201ENST00000306149 HRASP01112 189 aa12.58□□□□□ -0.39
CSDC2-201ENST00000306149 GCH1P30793 250 aa12.58□□□□□ -0.39
CSDC2-201ENST00000306149 SPRNQ5BIV9 151 aa12.58□□□□□ -0.39
CSDC2-201ENST00000306149 UTF1Q5T230 341 aa12.58□□□□□ -0.39
CSDC2-201ENST00000306149 OR1P1Q8NH06 330 aa12.58□□□□□ -0.39
CSDC2-201ENST00000306149 ELOVL1Q9BW60 279 aa12.58□□□□□ -0.39
CSDC2-201ENST00000306149 ACTR3CQ9C0K3 210 aaPredicted RBP12.58□□□□□ -0.39
CSDC2-201ENST00000306149 LAMP3Q9UQV4 416 aa12.58□□□□□ -0.39
CSDC2-201ENST00000306149 OTOGLQ3ZCN5 2332 aa12.58□□□□□ -0.4
CSDC2-201ENST00000306149 RAB29O14966 203 aa12.58□□□□□ -0.4
CSDC2-201ENST00000306149 PAX1P15863 534 aa12.58□□□□□ -0.4
CSDC2-201ENST00000306149 COX5AP20674 150 aa12.58□□□□□ -0.4
CSDC2-201ENST00000306149 GUSBP1Q15486 140 aa12.58□□□□□ -0.4
CSDC2-201ENST00000306149 ZNF124Q15973 351 aa12.58□□□□□ -0.4
CSDC2-201ENST00000306149 ANAPC16Q96DE5 110 aa12.58□□□□□ -0.4
CSDC2-201ENST00000306149 RHOVQ96L33 236 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms