RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 ZNF355PQ9NSJ1 428 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 MTCH1Q9NZJ7 389 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 TAAR3PQ9P1P4 343 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 TNFSF18Q9UNG2 199 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 HUWE1Q7Z6Z7 4374 aaKnown RBP2.43□□□□□ -2.02
HERC4-201ENST00000277817 TMEM30CPA0ZSE6 113 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 NKX2-6A6NCS4 301 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 OR7C2O60412 319 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 CST2P09228 141 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 OR5G3P0C626 314 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 RCC1P18754 421 aaPredicted RBP2.43□□□□□ -2.02
HERC4-201ENST00000277817 DYNLT3P51808 116 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 GNB1P62873 340 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 PSG4Q00888 419 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 CACNA1DQ01668 2161 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 ZNF90Q03938 601 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 SMIM21Q3B7S5 101 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 ACOT6Q3I5F7 207 aaPredicted RBP2.43□□□□□ -2.02
HERC4-201ENST00000277817 BTNL3Q6UXE8 466 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 ZNF705AQ6ZN79 300 aaPredicted RBP2.43□□□□□ -2.02
HERC4-201ENST00000277817 ERASQ7Z444 233 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 ZNF439Q8NDP4 499 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 OR10AD1Q8NGE0 317 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 OR10X1Q8NGY0 326 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 TMEM37Q8WXS4 190 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 LURAP1Q96LR2 239 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 COMMD5Q9GZQ3 224 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 CHST5Q9GZS9 411 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 TMEM38BQ9NVV0 291 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 TREM2Q9NZC2 230 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 OR5AC2Q9NZP5 309 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 LAMP3Q9UQV4 416 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 LHFPL6Q9Y693 200 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 LOC101059948A0A1B0GTJ6 334 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 NKX6-3A6NJ46 265 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 TRDCB7Z8K6 153 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 F6UZH7 168 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 ABCD4O14678 606 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 MBP02144 154 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 APOA2P02652 100 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 IGKV3-11P04433 115 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 PGA4P0DJD7 388 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 DTYMKP23919 212 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 PPP1CBP62140 327 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 RPS11P62280 158 aaKnown RBP eCLIP2.42□□□□□ -2.02
HERC4-201ENST00000277817 ZNF92Q03936 586 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 FABP9Q0Z7S8 132 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 ZNF154Q13106 437 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 SURF2Q15527 256 aaPredicted RBP2.42□□□□□ -2.02
HERC4-201ENST00000277817 TRIP6Q15654 476 aaKnown RBP2.42□□□□□ -2.02
HERC4-201ENST00000277817 FAM27BQ5VT28 67 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 DEFB124Q8NES8 71 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 OR13D1Q8NGV5 346 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 OR13G1Q8NGZ3 307 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 PTX4Q96A99 478 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 CIB3Q96Q77 187 aaPredicted RBP2.42□□□□□ -2.02
HERC4-201ENST00000277817 PCGF1Q9BSM1 259 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 OR2D2Q9H210 308 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.42□□□□□ -2.02
HERC4-201ENST00000277817 ZNF107Q9UII5 783 aaPredicted RBP2.42□□□□□ -2.02
HERC4-201ENST00000277817 STARD10Q9Y365 291 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 ARHGEF17Q96PE2 2063 aaPredicted RBP2.42□□□□□ -2.02
HERC4-201ENST00000277817 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.42□□□□□ -2.021e-5■■■■□ 21.5
HERC4-201ENST00000277817 PPIAL4EA0A075B759 164 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 IGKV1D-43A0A0B4J1Z2 117 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 TRAV17A0A0B4J275 112 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 GAGE12BA1L429 117 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 GAGE12HA6NDE8 117 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 RBFOX3A6NFN3 312 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 NPIPB9F8W1W9 429 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 PHOX2AO14813 284 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 EFNA2O43921 213 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 RAMP1O60894 148 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 C1QL1O75973 258 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 YIF1AO95070 293 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 HPP00738 406 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 ISG15P05161 165 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 OR10J4P0C629 311 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 PPIAL4FP0DN26 164 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 VDAC1P21796 283 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 GNG10P50151 68 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 RAB13P51153 203 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 IGLV3-21P80748 117 aaPredicted RBP2.42□□□□□ -2.02
HERC4-201ENST00000277817 SLC38A11Q08AI6 406 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 MPV17LQ2QL34 196 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 FFAR4Q5NUL3 377 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 C1orf100Q5SVJ3 147 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 HES3Q5TGS1 186 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 LAMTOR1Q6IAA8 161 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 SKA3Q8IX90 412 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 Q8IYB0 196 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 LYG1Q8N1E2 194 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 UBAC2Q8NBM4 344 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 MDS2Q8NDY4 140 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 CMTM2Q8TAZ6 248 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 ZNF519Q8TB69 540 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 OR10C1Q96KK4 312 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 OR51I2Q9H344 312 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 WDR54Q9H977 334 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 FAM206AQ9NX38 181 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms