RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 PTPRSQ13332 1948 aa16.75■□□□□ 0.27
CSPG5-201ENST00000264723 TMEM210A6NLX4 147 aa16.75■□□□□ 0.27
CSPG5-201ENST00000264723 RAMP3O60896 148 aa16.75■□□□□ 0.27
CSPG5-201ENST00000264723 Q6ZRM9 215 aa16.75■□□□□ 0.27
CSPG5-201ENST00000264723 SLC35E3Q7Z769 313 aa16.75■□□□□ 0.27
CSPG5-201ENST00000264723 TMEM56Q96MV1 263 aa16.75■□□□□ 0.27
CSPG5-201ENST00000264723 RYDENQ9NUL5 291 aaKnown RBP16.75■□□□□ 0.27
CSPG5-201ENST00000264723 TMEM56-RWDD3S4R434 201 aa16.75■□□□□ 0.27
CSPG5-201ENST00000264723 PPIHO43447 177 aaKnown RBP16.75■□□□□ 0.27
CSPG5-201ENST00000264723 NDUFB4O95168 129 aa16.75■□□□□ 0.27
CSPG5-201ENST00000264723 PNRC1Q12796 327 aaPredicted RBP16.75■□□□□ 0.27
CSPG5-201ENST00000264723 OR51M1Q9H341 326 aa16.75■□□□□ 0.27
CSPG5-201ENST00000264723 SLC35D1Q9NTN3 355 aa16.75■□□□□ 0.27
CSPG5-201ENST00000264723 CYB5R3P00387 301 aaPredicted RBP16.75■□□□□ 0.27
CSPG5-201ENST00000264723 LYL1P12980 280 aa16.75■□□□□ 0.27
CSPG5-201ENST00000264723 TCL1AP56279 114 aa16.75■□□□□ 0.27
CSPG5-201ENST00000264723 GABRA6Q16445 453 aa16.75■□□□□ 0.27
CSPG5-201ENST00000264723 PKIBQ9C010 78 aa16.75■□□□□ 0.27
CSPG5-201ENST00000264723 HRASP01112 189 aa16.74■□□□□ 0.27
CSPG5-201ENST00000264723 SLC35B1P78383 322 aa16.74■□□□□ 0.27
CSPG5-201ENST00000264723 TNFRSF9Q07011 255 aa16.74■□□□□ 0.27
CSPG5-201ENST00000264723 PRR27Q6MZM9 219 aa16.74■□□□□ 0.27
CSPG5-201ENST00000264723 ZCCHC24Q8N2G6 241 aaKnown RBP16.74■□□□□ 0.27
CSPG5-201ENST00000264723 CLDND2Q8NHS1 167 aa16.74■□□□□ 0.27
CSPG5-201ENST00000264723 PIEZO1Q92508 2521 aa16.74■□□□□ 0.27
CSPG5-201ENST00000264723 NTF3P20783 257 aa16.74■□□□□ 0.27
CSPG5-201ENST00000264723 RNFT1Q5M7Z0 435 aa16.74■□□□□ 0.27
CSPG5-201ENST00000264723 GATAD1Q8WUU5 269 aa16.74■□□□□ 0.27
CSPG5-201ENST00000264723 PLSCR2Q9NRY7 297 aa16.74■□□□□ 0.27
CSPG5-201ENST00000264723 TLN1Q9Y490 2541 aaKnown RBP16.74■□□□□ 0.27
CSPG5-201ENST00000264723 C17orf98A8MV24 154 aa16.74■□□□□ 0.27
CSPG5-201ENST00000264723 ERVFRD-1P60508 538 aa16.74■□□□□ 0.27
CSPG5-201ENST00000264723 RPL31P62899 125 aaKnown RBP16.74■□□□□ 0.27
CSPG5-201ENST00000264723 TMEM18Q96B42 140 aa16.74■□□□□ 0.27
CSPG5-201ENST00000264723 TRANK1O15050 2925 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 DUXBA0A1W2PPF3 345 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 C5orf52A6NGY3 159 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 C19orf67A6NJJ6 358 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 SIRT7Q9NRC8 400 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 ETV2O00321 342 aaPredicted RBP16.73■□□□□ 0.27
CSPG5-201ENST00000264723 TOX4O94842 621 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 WNT5AP41221 380 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 ERVFC1-1P60608 527 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 ACSM6Q6P461 480 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 ONECUT1Q9UBC0 465 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 IGKV1-6A0A0C4DH72 117 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 FAM90A10PA6NDY2 464 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 FAM90A18PA6NE21 464 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 FAM90A16PA6NEW6 464 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 FAM90A20PA6NIJ5 464 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 FAM90A8PA6NJQ4 464 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 FAM90A7PA6NKC0 464 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 FAM90A22PA8MWA6 464 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 FAM90A12PA8MX19 464 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 FAM90A5PA8MXJ8 464 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 FAM90A23PA8MXZ1 464 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 CD3EP07766 207 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 FAM90A15PP0C7V4 464 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 FAM90A13PP0C7W8 464 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 FAM90A14PP0C7W9 464 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 FAM90A24PP0C7X0 464 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 CDX1P47902 265 aaPredicted RBP16.73■□□□□ 0.27
CSPG5-201ENST00000264723 GAMTQ14353 236 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 ABHD12Q8N2K0 398 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 PRR7Q8TB68 274 aa16.73■□□□□ 0.27
CSPG5-201ENST00000264723 PTPRQQ9UMZ3 2332 aa16.72■□□□□ 0.27
CSPG5-201ENST00000264723 CFAP54Q96N23 3096 aa16.72■□□□□ 0.27
CSPG5-201ENST00000264723 LOC102723971A0A1B0GUV8 181 aa16.72■□□□□ 0.27
CSPG5-201ENST00000264723 C12orf77C9JDV5 145 aa16.72■□□□□ 0.27
CSPG5-201ENST00000264723 HIST1H3AP68431 136 aa16.72■□□□□ 0.27
CSPG5-201ENST00000264723 TFF3Q07654 80 aa16.72■□□□□ 0.27
CSPG5-201ENST00000264723 IL15RAQ13261 267 aa16.72■□□□□ 0.27
CSPG5-201ENST00000264723 ABHD17AQ96GS6 310 aa16.72■□□□□ 0.27
CSPG5-201ENST00000264723 FAM87AP0C7U9 286 aa16.72■□□□□ 0.27
CSPG5-201ENST00000264723 G0S2P27469 103 aa16.72■□□□□ 0.27
CSPG5-201ENST00000264723 SERF2P84101 59 aa16.72■□□□□ 0.27
CSPG5-201ENST00000264723 ZNF506Q5JVG8 444 aa16.72■□□□□ 0.27
CSPG5-201ENST00000264723 EML6Q6ZMW3 1958 aa16.72■□□□□ 0.27
CSPG5-201ENST00000264723 ODAMA1E959 279 aa16.72■□□□□ 0.27
CSPG5-201ENST00000264723 LINC00596Q86U02 117 aa16.72■□□□□ 0.27
CSPG5-201ENST00000264723 LRTM2Q8N967 370 aa16.72■□□□□ 0.27
CSPG5-201ENST00000264723 CTXND1A0A1B0GTU2 59 aa16.71■□□□□ 0.27
CSPG5-201ENST00000264723 ZNF503-AS2A6NEH8 195 aa16.71■□□□□ 0.27
CSPG5-201ENST00000264723 CCL21O00585 134 aa16.71■□□□□ 0.27
CSPG5-201ENST00000264723 ANAPC10Q9UM13 185 aa16.71■□□□□ 0.27
CSPG5-201ENST00000264723 MRPS18CQ9Y3D5 142 aaKnown RBP16.71■□□□□ 0.27
CSPG5-201ENST00000264723 IGHV3-72A0A0B4J1Y9 119 aa16.71■□□□□ 0.27
CSPG5-201ENST00000264723 FAM157AC9JC47 383 aa16.71■□□□□ 0.27
CSPG5-201ENST00000264723 OR4S2Q8NH73 311 aa16.71■□□□□ 0.27
CSPG5-201ENST00000264723 HSD17B10Q99714 261 aaKnown RBP16.71■□□□□ 0.27
CSPG5-201ENST00000264723 WDR61Q9GZS3 305 aaKnown RBP16.71■□□□□ 0.27
CSPG5-201ENST00000264723 PARLQ9H300 379 aa16.71■□□□□ 0.27
CSPG5-201ENST00000264723 KCNIP2Q9NS61 270 aa16.71■□□□□ 0.27
CSPG5-201ENST00000264723 ATRXP46100 2492 aa16.71■□□□□ 0.27
CSPG5-201ENST00000264723 MGST3O14880 152 aa16.71■□□□□ 0.27
CSPG5-201ENST00000264723 PTBP3O95758 552 aaKnown RBP16.71■□□□□ 0.27
CSPG5-201ENST00000264723 SUB1P53999 127 aaKnown RBP eCLIP16.7■□□□□ 0.26
CSPG5-201ENST00000264723 MIC13Q5XKP0 118 aa16.7■□□□□ 0.26
CSPG5-201ENST00000264723 TMEM42Q69YG0 159 aa16.7■□□□□ 0.26
CSPG5-201ENST00000264723 ZNF525Q8N782 197 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms