RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 CST7O76096 145 aa10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 GOSR1O95249 250 aa10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 POLR2GP62487 172 aaKnown RBP eCLIP10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 HMGN3Q15651 99 aa10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 FAM53AQ6NSI3 398 aaPredicted RBP10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 LYPD6Q86Y78 171 aa10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 TSNAXQ99598 290 aaKnown RBP10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 PSENENQ9NZ42 101 aa10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 RCL1Q9Y2P8 373 aaKnown RBP10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 TRAV40A0A0B4J280 105 aa10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 CLEC18AA5D8T8 446 aa10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 CRYBA1P05813 215 aa10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 TEX36Q5VZQ5 186 aa10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 DTX2Q86UW9 622 aa10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 UBAC2Q8NBM4 344 aa10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 CLEC18CQ8NCF0 446 aa10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 SLC25A17O43808 307 aa10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 YPEL1O60688 119 aa10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 CD8AP01732 235 aa10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 MC5RP33032 325 aa10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 HTD2P86397 168 aa10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 TFF3Q07654 80 aa10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 RAB31Q13636 194 aa10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 VSTM2AQ8TAG5 236 aa10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 YPEL2Q96QA6 119 aa10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 TP53RKQ96S44 253 aa10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 RASL11BQ9BPW5 248 aa10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 TMEM222Q9H0R3 208 aa10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 HES4Q9HCC6 221 aa10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 C1RLQ9NZP8 487 aa10.33□□□□□ -0.76
SCAMP1-207ENST00000621999 WIPF3A6NGB9 483 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 CRYM-AS1A6NIL9 109 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 NDUFS8O00217 210 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 HPRT1P00492 218 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 IFNA7P01567 189 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 IGHV1-8P0DP01 117 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 SLC25A16P16260 332 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 RAB2AP61019 212 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 HBG1P69891 147 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 HBG2P69892 147 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 ANKRD55Q3KP44 614 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 TMEM30BQ3MIR4 351 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 WASHC3Q9Y3C0 194 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 J3QR06 171 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 TRAPPC2P0DI81 140 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 TRAPPC2BP0DI82 140 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 SUB1P53999 127 aaKnown RBP eCLIP10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 UCP3P55916 312 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 HSD17B11Q8NBQ5 300 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 OPN4Q9UHM6 478 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 S1PR2O95136 353 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 WNT2P09544 360 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 ZNF735P0CB33 412 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 NAT1P18440 290 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 CEBPGP53567 150 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 CD300CQ08708 224 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 OR5M8Q8NGP6 311 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 CTSZQ9UBR2 303 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 STRAPQ9Y3F4 350 aaKnown RBP10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 LOC400499M0QZD8 3231 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 SAA2-SAA4A0A096LPE2 208 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 H0Y980 276 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 TEX46H3BTG2 121 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 LHBP01229 141 aa10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 SAA2P0DJI9 122 aaPredicted RBP10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 DVL1P1P54792 670 aaPredicted RBP10.32□□□□□ -0.76
SCAMP1-207ENST00000621999 C17orf98A8MV24 154 aa10.31□□□□□ -0.76
SCAMP1-207ENST00000621999 FAM106CPP0CH98 169 aa10.31□□□□□ -0.76
SCAMP1-207ENST00000621999 PDLIM3Q53GG5 364 aaPredicted RBP10.31□□□□□ -0.76
SCAMP1-207ENST00000621999 MSI2Q96DH6 328 aaKnown RBP10.31□□□□□ -0.76
SCAMP1-207ENST00000621999 RTBDNQ9BSG5 229 aaPredicted RBP10.31□□□□□ -0.76
SCAMP1-207ENST00000621999 MRPL20Q9BYC9 149 aaKnown RBP10.31□□□□□ -0.76
SCAMP1-207ENST00000621999 ZNRD1Q9P1U0 126 aa10.31□□□□□ -0.76
SCAMP1-207ENST00000621999 RRASP10301 218 aa10.31□□□□□ -0.76
SCAMP1-207ENST00000621999 LOXP28300 417 aaPredicted RBP10.31□□□□□ -0.76
SCAMP1-207ENST00000621999 BTCP35070 178 aa10.31□□□□□ -0.76
SCAMP1-207ENST00000621999 BRD3OSQ6XYD6 125 aa10.31□□□□□ -0.76
SCAMP1-207ENST00000621999 VMO1Q7Z5L0 202 aa10.31□□□□□ -0.76
SCAMP1-207ENST00000621999 TMEM56Q96MV1 263 aa10.31□□□□□ -0.76
SCAMP1-207ENST00000621999 TMUB1Q9BVT8 246 aa10.31□□□□□ -0.76
SCAMP1-207ENST00000621999 GHITMQ9H3K2 345 aa10.31□□□□□ -0.76
SCAMP1-207ENST00000621999 E5RGE8 158 aa10.31□□□□□ -0.76
SCAMP1-207ENST00000621999 TMEM11P17152 192 aa10.31□□□□□ -0.76
SCAMP1-207ENST00000621999 RPL12P30050 165 aaKnown RBP10.31□□□□□ -0.76
SCAMP1-207ENST00000621999 OR11H7Q8NGC8 314 aa10.31□□□□□ -0.76
SCAMP1-207ENST00000621999 TMEM204Q9BSN7 226 aa10.31□□□□□ -0.76
SCAMP1-207ENST00000621999 IGHV4-30-2A0A087WSY4 118 aa10.3□□□□□ -0.76
SCAMP1-207ENST00000621999 SCGB2A1O75556 95 aa10.3□□□□□ -0.76
SCAMP1-207ENST00000621999 RNF224P0DH78 156 aa10.3□□□□□ -0.76
SCAMP1-207ENST00000621999 ZNF616Q08AN1 781 aa10.3□□□□□ -0.76
SCAMP1-207ENST00000621999 HERPUD1Q15011 391 aa10.3□□□□□ -0.76
SCAMP1-207ENST00000621999 GZMKP49863 264 aa10.3□□□□□ -0.76
SCAMP1-207ENST00000621999 BAXQ07812 192 aa10.3□□□□□ -0.76
SCAMP1-207ENST00000621999 CIB3Q96Q77 187 aaPredicted RBP10.3□□□□□ -0.76
SCAMP1-207ENST00000621999 IFT22Q9H7X7 185 aa10.3□□□□□ -0.76
SCAMP1-207ENST00000621999 CHD6Q8TD26 2715 aa10.3□□□□□ -0.76
SCAMP1-207ENST00000621999 IGHV2-26A0A0B4J1V2 119 aa10.3□□□□□ -0.76
SCAMP1-207ENST00000621999 SLC31A2O15432 143 aa10.3□□□□□ -0.76
SCAMP1-207ENST00000621999 IGHV2-70P01814 119 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms