RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 LYZL2Q7Z4W2 148 aa8.66□□□□□ -1.02
CPNE3-212ENST00000621783 TCTE3Q8IZS6 198 aa8.66□□□□□ -1.02
CPNE3-212ENST00000621783 SPAG16Q8N0X2 631 aa8.66□□□□□ -1.02
CPNE3-212ENST00000621783 TCTEX1D1Q8N7M0 179 aa8.66□□□□□ -1.02
CPNE3-212ENST00000621783 ZNF383Q8NA42 475 aa8.66□□□□□ -1.02
CPNE3-212ENST00000621783 MAPK1IP1LQ8NDC0 245 aa8.66□□□□□ -1.02
CPNE3-212ENST00000621783 RBPMSQ93062 196 aaKnown RBP8.66□□□□□ -1.02
CPNE3-212ENST00000621783 TMEM186Q96B77 213 aa8.66□□□□□ -1.02
CPNE3-212ENST00000621783 WDR89Q96FK6 387 aaPredicted RBP8.66□□□□□ -1.02
CPNE3-212ENST00000621783 ADTRPQ96IZ2 230 aa8.66□□□□□ -1.02
CPNE3-212ENST00000621783 MRPL20Q9BYC9 149 aaKnown RBP8.66□□□□□ -1.02
CPNE3-212ENST00000621783 HEXA-AS1Q9H8Q6 139 aa8.66□□□□□ -1.02
CPNE3-212ENST00000621783 DOCK11Q5JSL3 2073 aa8.66□□□□□ -1.02
CPNE3-212ENST00000621783 TRAV20A0A0B4J274 112 aa8.65□□□□□ -1.02
CPNE3-212ENST00000621783 C13orf42A0A1B0GVH6 325 aa8.65□□□□□ -1.02
CPNE3-212ENST00000621783 DUXBA0A1W2PPF3 345 aa8.65□□□□□ -1.02
CPNE3-212ENST00000621783 C5orf51A6NDU8 294 aa8.65□□□□□ -1.02
CPNE3-212ENST00000621783 B4DSR2 109 aa8.65□□□□□ -1.02
CPNE3-212ENST00000621783 SMLR1H3BR10 107 aa8.65□□□□□ -1.02
CPNE3-212ENST00000621783 BUB1B-PAK6H3BSN5 160 aa8.65□□□□□ -1.02
CPNE3-212ENST00000621783 FCGR3BO75015 233 aa8.65□□□□□ -1.02
CPNE3-212ENST00000621783 OR2A4O95047 310 aa8.65□□□□□ -1.02
CPNE3-212ENST00000621783 CT45A6P0DMU7 189 aa8.65□□□□□ -1.02
CPNE3-212ENST00000621783 CT45A5P0DMU8 189 aa8.65□□□□□ -1.02
CPNE3-212ENST00000621783 CT45A7P0DMV0 189 aa8.65□□□□□ -1.02
CPNE3-212ENST00000621783 LPAR6P43657 344 aa8.65□□□□□ -1.02
CPNE3-212ENST00000621783 SRSF4Q08170 494 aaKnown RBP8.65□□□□□ -1.02
CPNE3-212ENST00000621783 GSG1LQ6UXU4 331 aa8.65□□□□□ -1.02
CPNE3-212ENST00000621783 PDZD9Q8IXQ8 264 aa8.65□□□□□ -1.02
CPNE3-212ENST00000621783 LINC01356Q8N9X3 169 aa8.65□□□□□ -1.02
CPNE3-212ENST00000621783 OR10C1Q96KK4 312 aa8.65□□□□□ -1.02
CPNE3-212ENST00000621783 OR2A7Q96R45 310 aa8.65□□□□□ -1.02
CPNE3-212ENST00000621783 FOXC2Q99958 501 aa8.65□□□□□ -1.02
CPNE3-212ENST00000621783 NABP2Q9BQ15 211 aa8.65□□□□□ -1.02
CPNE3-212ENST00000621783 PDCD10Q9BUL8 212 aa8.65□□□□□ -1.02
CPNE3-212ENST00000621783 FAM212BQ9NTI7 297 aaPredicted RBP8.65□□□□□ -1.02
CPNE3-212ENST00000621783 PRELID3BQ9Y3B1 194 aa8.65□□□□□ -1.02
CPNE3-212ENST00000621783 PIGBOS1A0A0B4J2F0 54 aa8.64□□□□□ -1.03
CPNE3-212ENST00000621783 A0A0G2JRQ6 117 aa8.64□□□□□ -1.03
CPNE3-212ENST00000621783 A0A1W2PRD5 423 aa8.64□□□□□ -1.03
CPNE3-212ENST00000621783 A0A1W2PRF3 423 aa8.64□□□□□ -1.03
CPNE3-212ENST00000621783 A0A1W2PRM7 423 aa8.64□□□□□ -1.03
CPNE3-212ENST00000621783 RBFOX2O43251 390 aaKnown RBP eCLIP8.64□□□□□ -1.03
CPNE3-212ENST00000621783 IFNA21P01568 189 aa8.64□□□□□ -1.03
CPNE3-212ENST00000621783 IGKV1-5P01602 117 aa8.64□□□□□ -1.03
CPNE3-212ENST00000621783 HNRNPCP07910 306 aaKnown RBP eCLIP8.64□□□□□ -1.03
CPNE3-212ENST00000621783 RPA2P15927 270 aa8.64□□□□□ -1.03
CPNE3-212ENST00000621783 RAP2BP61225 183 aa8.64□□□□□ -1.03
CPNE3-212ENST00000621783 LDLRAD2Q5SZI1 272 aa8.64□□□□□ -1.03
CPNE3-212ENST00000621783 TGIF2LXQ8IUE1 241 aa8.64□□□□□ -1.03
CPNE3-212ENST00000621783 WFDC11Q8NEX6 87 aa8.64□□□□□ -1.03
CPNE3-212ENST00000621783 OR4S2Q8NH73 311 aa8.64□□□□□ -1.03
CPNE3-212ENST00000621783 CD300LFQ8TDQ1 290 aa8.64□□□□□ -1.03
CPNE3-212ENST00000621783 ASB13Q8WXK3 278 aa8.64□□□□□ -1.03
CPNE3-212ENST00000621783 LHX4Q969G2 390 aa8.64□□□□□ -1.03
CPNE3-212ENST00000621783 PPP1R14BQ96C90 147 aa8.64□□□□□ -1.03
CPNE3-212ENST00000621783 SEC22AQ96IW7 307 aa8.64□□□□□ -1.03
CPNE3-212ENST00000621783 SLC35D1Q9NTN3 355 aa8.64□□□□□ -1.03
CPNE3-212ENST00000621783 TMED3Q9Y3Q3 217 aa8.64□□□□□ -1.03
CPNE3-212ENST00000621783 ARHGAP32A7KAX9 2087 aa8.64□□□□□ -1.03
CPNE3-212ENST00000621783 ABCA2Q9BZC7 2435 aa8.64□□□□□ -1.03
CPNE3-212ENST00000621783 HELZ2Q9BYK8 2649 aaKnown RBP8.63□□□□□ -1.03
CPNE3-212ENST00000621783 G3V3Q6 166 aa8.63□□□□□ -1.03
CPNE3-212ENST00000621783 H0YJW9 148 aa8.63□□□□□ -1.03
CPNE3-212ENST00000621783 LY6LH3BQJ8 138 aa8.63□□□□□ -1.03
CPNE3-212ENST00000621783 TXNL1O43396 289 aa8.63□□□□□ -1.03
CPNE3-212ENST00000621783 APOA2P02652 100 aa8.63□□□□□ -1.03
CPNE3-212ENST00000621783 IGHV4-31P0DP07 118 aa8.63□□□□□ -1.03
CPNE3-212ENST00000621783 VDAC1P21796 283 aa8.63□□□□□ -1.03
CPNE3-212ENST00000621783 HTR1DP28221 377 aa8.63□□□□□ -1.03
CPNE3-212ENST00000621783 AKR1C2P52895 323 aa8.63□□□□□ -1.03
CPNE3-212ENST00000621783 RTL8BQ17RB0 113 aa8.63□□□□□ -1.03
CPNE3-212ENST00000621783 IAH1Q2TAA2 248 aaPredicted RBP8.63□□□□□ -1.03
CPNE3-212ENST00000621783 TMEM249Q2WGJ8 235 aa8.63□□□□□ -1.03
CPNE3-212ENST00000621783 NMSQ5H8A3 153 aa8.63□□□□□ -1.03
CPNE3-212ENST00000621783 TPTE2P1Q5T6R2 138 aa8.63□□□□□ -1.03
CPNE3-212ENST00000621783 LHFPL4Q7Z7J7 247 aa8.63□□□□□ -1.03
CPNE3-212ENST00000621783 OR2T35Q8NGX2 323 aa8.63□□□□□ -1.03
CPNE3-212ENST00000621783 RNASE11Q8TAA1 199 aaKnown RBP8.63□□□□□ -1.03
CPNE3-212ENST00000621783 RPEQ96AT9 228 aa8.63□□□□□ -1.03
CPNE3-212ENST00000621783 C2orf50Q96LR7 162 aa8.63□□□□□ -1.03
CPNE3-212ENST00000621783 PLEKHA2Q9HB19 425 aa8.63□□□□□ -1.03
CPNE3-212ENST00000621783 HIF1ANQ9NWT6 349 aa8.63□□□□□ -1.03
CPNE3-212ENST00000621783 COMMD9Q9P000 198 aa8.63□□□□□ -1.03
CPNE3-212ENST00000621783 DPM3Q9P2X0 92 aa8.63□□□□□ -1.03
CPNE3-212ENST00000621783 CR1P17927 2039 aa8.63□□□□□ -1.03
CPNE3-212ENST00000621783 TRAV40A0A0B4J280 105 aa8.62□□□□□ -1.03
CPNE3-212ENST00000621783 IGHV1-3A0A0C4DH29 117 aa8.62□□□□□ -1.03
CPNE3-212ENST00000621783 A0A1W2PPI3 338 aa8.62□□□□□ -1.03
CPNE3-212ENST00000621783 LEUTXA8MZ59 168 aa8.62□□□□□ -1.03
CPNE3-212ENST00000621783 CRYZL1O95825 349 aa8.62□□□□□ -1.03
CPNE3-212ENST00000621783 HPRT1P00492 218 aa8.62□□□□□ -1.03
CPNE3-212ENST00000621783 GAPDHP04406 335 aaKnown RBP8.62□□□□□ -1.03
CPNE3-212ENST00000621783 EPHA1P21709 976 aa8.62□□□□□ -1.03
CPNE3-212ENST00000621783 GATA3P23771 443 aa8.62□□□□□ -1.03
CPNE3-212ENST00000621783 G6PCP35575 357 aa8.62□□□□□ -1.03
CPNE3-212ENST00000621783 CEACAM3P40198 252 aa8.62□□□□□ -1.03
CPNE3-212ENST00000621783 UBE2E1P51965 193 aa8.62□□□□□ -1.03
CPNE3-212ENST00000621783 ZFP69Q49AA0 526 aa8.62□□□□□ -1.03
CPNE3-212ENST00000621783 MINOS1Q5TGZ0 78 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms