RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 MCFD2Q8NI22 146 aa19.57■□□□□ 0.72
PMS1-220ENST00000618056 S100A16Q96FQ6 103 aaKnown RBP19.57■□□□□ 0.72
PMS1-220ENST00000618056 RRHO14718 337 aa19.56■□□□□ 0.72
PMS1-220ENST00000618056 XRCC3O43542 346 aa19.56■□□□□ 0.72
PMS1-220ENST00000618056 APOA2P02652 100 aa19.56■□□□□ 0.72
PMS1-220ENST00000618056 CFHR3Q02985 330 aa19.56■□□□□ 0.72
PMS1-220ENST00000618056 KHDC1LQ5JSQ8 128 aa19.56■□□□□ 0.72
PMS1-220ENST00000618056 LIN54Q6MZP7 749 aa19.56■□□□□ 0.72
PMS1-220ENST00000618056 ZFP57Q9NU63 452 aa19.56■□□□□ 0.72
PMS1-220ENST00000618056 RBM7Q9Y580 266 aaKnown RBP19.56■□□□□ 0.72
PMS1-220ENST00000618056 A3GALT2U3KPV4 340 aa19.56■□□□□ 0.72
PMS1-220ENST00000618056 IGHV7-81A0A0B4J1V7 117 aa19.55■□□□□ 0.72
PMS1-220ENST00000618056 IGKV1-16P04430 117 aa19.55■□□□□ 0.72
PMS1-220ENST00000618056 LINC00205P59089 165 aa19.55■□□□□ 0.72
PMS1-220ENST00000618056 RPL23AP62750 156 aaKnown RBP19.55■□□□□ 0.72
PMS1-220ENST00000618056 SAMD12Q8N8I0 201 aa19.55■□□□□ 0.72
PMS1-220ENST00000618056 S100ZQ8WXG8 99 aa19.55■□□□□ 0.72
PMS1-220ENST00000618056 BORCS5Q969J3 196 aa19.55■□□□□ 0.72
PMS1-220ENST00000618056 C5orf30Q96GV9 206 aa19.55■□□□□ 0.72
PMS1-220ENST00000618056 OR51J1Q9H342 316 aa19.55■□□□□ 0.72
PMS1-220ENST00000618056 TNCP24821 2201 aa19.55■□□□□ 0.72
PMS1-220ENST00000618056 OR5H8P0DN80 308 aa19.54■□□□□ 0.72
PMS1-220ENST00000618056 PF4V1P10720 104 aa19.54■□□□□ 0.72
PMS1-220ENST00000618056 TAGLNQ01995 201 aaKnown RBP19.54■□□□□ 0.72
PMS1-220ENST00000618056 RNF152Q8N8N0 203 aa19.54■□□□□ 0.72
PMS1-220ENST00000618056 OR6Q1Q8NGQ2 317 aa19.54■□□□□ 0.72
PMS1-220ENST00000618056 WDR12Q9GZL7 423 aaKnown RBP19.54■□□□□ 0.72
PMS1-220ENST00000618056 FBXL15Q9H469 300 aa19.54■□□□□ 0.72
PMS1-220ENST00000618056 OR2W1Q9Y3N9 320 aa19.54■□□□□ 0.72
PMS1-220ENST00000618056 SPDEFO95238 335 aa19.54■□□□□ 0.72
PMS1-220ENST00000618056 VDAC1P21796 283 aa19.54■□□□□ 0.72
PMS1-220ENST00000618056 SLC6A1P30531 599 aa19.54■□□□□ 0.72
PMS1-220ENST00000618056 ZNF846Q147U1 533 aa19.54■□□□□ 0.72
PMS1-220ENST00000618056 HOGA1Q86XE5 327 aa19.54■□□□□ 0.72
PMS1-220ENST00000618056 BEST4Q8NFU0 473 aa19.54■□□□□ 0.72
PMS1-220ENST00000618056 TSNAXQ99598 290 aaKnown RBP19.54■□□□□ 0.72
PMS1-220ENST00000618056 SLC35D1Q9NTN3 355 aa19.54■□□□□ 0.72
PMS1-220ENST00000618056 IGHG4P01861 327 aa19.53■□□□□ 0.72
PMS1-220ENST00000618056 HLA-DQB1P01920 261 aa19.53■□□□□ 0.72
PMS1-220ENST00000618056 ELANEP08246 267 aa19.53■□□□□ 0.72
PMS1-220ENST00000618056 FOXE3Q13461 319 aa19.53■□□□□ 0.72
PMS1-220ENST00000618056 GVQW1Q8N7I0 195 aa19.53■□□□□ 0.72
PMS1-220ENST00000618056 FLYWCH2Q96CP2 140 aaKnown RBP19.53■□□□□ 0.72
PMS1-220ENST00000618056 NXF2Q9GZY0 626 aaKnown RBP19.53■□□□□ 0.72
PMS1-220ENST00000618056 ATP6V0E1O15342 81 aa19.52■□□□□ 0.72
PMS1-220ENST00000618056 NFYAP23511 347 aaPredicted RBP19.52■□□□□ 0.72
PMS1-220ENST00000618056 CBX5P45973 191 aa19.52■□□□□ 0.72
PMS1-220ENST00000618056 THBS3P49746 956 aa19.52■□□□□ 0.72
PMS1-220ENST00000618056 LUMP51884 338 aaPredicted RBP19.52■□□□□ 0.72
PMS1-220ENST00000618056 RPS16P62249 146 aaKnown RBP19.52■□□□□ 0.72
PMS1-220ENST00000618056 PSG5Q15238 335 aa19.52■□□□□ 0.72
PMS1-220ENST00000618056 ZNF660Q6AZW8 331 aaPredicted RBP19.52■□□□□ 0.72
PMS1-220ENST00000618056 ZNF645Q8N7E2 425 aa19.52■□□□□ 0.72
PMS1-220ENST00000618056 WFDC9Q8NEX5 89 aa19.52■□□□□ 0.72
PMS1-220ENST00000618056 ADTRPQ96IZ2 230 aa19.52■□□□□ 0.72
PMS1-220ENST00000618056 CMTM3Q96MX0 182 aa19.52■□□□□ 0.72
PMS1-220ENST00000618056 AKIP1Q9NQ31 210 aa19.52■□□□□ 0.72
PMS1-220ENST00000618056 TUSC2O75896 110 aa19.51■□□□□ 0.71
PMS1-220ENST00000618056 SLC22A5O76082 557 aa19.51■□□□□ 0.71
PMS1-220ENST00000618056 PTHLHP12272 177 aa19.51■□□□□ 0.71
PMS1-220ENST00000618056 PLGLAQ15195 96 aa19.51■□□□□ 0.71
PMS1-220ENST00000618056 TMEM69Q5SWH9 247 aa19.51■□□□□ 0.71
PMS1-220ENST00000618056 C6orf62Q9GZU0 229 aaPredicted RBP19.51■□□□□ 0.71
PMS1-220ENST00000618056 PARP11Q9NR21 331 aa19.51■□□□□ 0.71
PMS1-220ENST00000618056 PPIFP30405 207 aaKnown RBP19.5■□□□□ 0.71
PMS1-220ENST00000618056 DUTP33316 252 aaKnown RBP19.5■□□□□ 0.71
PMS1-220ENST00000618056 CRIP2P52943 208 aaPredicted RBP19.5■□□□□ 0.71
PMS1-220ENST00000618056 ARPC4P59998 168 aa19.5■□□□□ 0.71
PMS1-220ENST00000618056 DEFA6Q01524 100 aa19.5■□□□□ 0.71
PMS1-220ENST00000618056 CXorf66Q5JRM2 361 aaPredicted RBP19.5■□□□□ 0.71
PMS1-220ENST00000618056 SAMD5Q5TGI4 173 aa19.5■□□□□ 0.71
PMS1-220ENST00000618056 ACOT12Q8WYK0 555 aa19.5■□□□□ 0.71
PMS1-220ENST00000618056 DDB2Q92466 427 aa19.5■□□□□ 0.71
PMS1-220ENST00000618056 METTL1Q9UBP6 276 aaKnown RBP19.5■□□□□ 0.71
PMS1-220ENST00000618056 FCN1O00602 326 aa19.49■□□□□ 0.71
PMS1-220ENST00000618056 PF4P02776 101 aa19.49■□□□□ 0.71
PMS1-220ENST00000618056 RRASP10301 218 aa19.49■□□□□ 0.71
PMS1-220ENST00000618056 PSMB8P28062 276 aa19.49■□□□□ 0.71
PMS1-220ENST00000618056 LGALS7P47929 136 aa19.49■□□□□ 0.71
PMS1-220ENST00000618056 TAS2R20P59543 309 aa19.49■□□□□ 0.71
PMS1-220ENST00000618056 CX3CL1P78423 397 aa19.49■□□□□ 0.71
PMS1-220ENST00000618056 NDPQ00604 133 aa19.49■□□□□ 0.71
PMS1-220ENST00000618056 TMEM177Q53S58 311 aa19.49■□□□□ 0.71
PMS1-220ENST00000618056 PALMDQ9NP74 551 aa19.49■□□□□ 0.71
PMS1-220ENST00000618056 IGKV1D-13A0A0B4J2D9 117 aa19.48■□□□□ 0.71
PMS1-220ENST00000618056 G3V318 75 aa19.48■□□□□ 0.71
PMS1-220ENST00000618056 APOA1P02647 267 aa19.48■□□□□ 0.71
PMS1-220ENST00000618056 RPLP1P05386 114 aaKnown RBP19.48■□□□□ 0.71
PMS1-220ENST00000618056 IGKV1-13P0DP09 117 aa19.48■□□□□ 0.71
PMS1-220ENST00000618056 S100A5P33763 92 aa19.48■□□□□ 0.71
PMS1-220ENST00000618056 RORCP51449 518 aa19.48■□□□□ 0.71
PMS1-220ENST00000618056 CBX3Q13185 183 aa19.48■□□□□ 0.71
PMS1-220ENST00000618056 RTL8BQ17RB0 113 aa19.48■□□□□ 0.71
PMS1-220ENST00000618056 SNAPC3Q92966 411 aa19.48■□□□□ 0.71
PMS1-220ENST00000618056 COMMD3Q9UBI1 195 aa19.48■□□□□ 0.71
PMS1-220ENST00000618056 TRAV41A0A0B4J266 112 aa19.48■□□□□ 0.71
PMS1-220ENST00000618056 LINC00473A8K010 186 aa19.48■□□□□ 0.71
PMS1-220ENST00000618056 G3V4G9 280 aa19.48■□□□□ 0.71
PMS1-220ENST00000618056 IGLV2-23P01705 113 aa19.48■□□□□ 0.71
PMS1-220ENST00000618056 EIF4EP06730 217 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms