RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 ZNF660Q6AZW8 331 aaPredicted RBP13.2□□□□□ -0.3
IRF1-211ENST00000613424 Q8N9W7 124 aa13.2□□□□□ -0.3
IRF1-211ENST00000613424 OR8H1Q8NGG4 311 aa13.2□□□□□ -0.3
IRF1-211ENST00000613424 SERTAD4Q9NUC0 356 aa13.2□□□□□ -0.3
IRF1-211ENST00000613424 WASHC3Q9Y3C0 194 aa13.2□□□□□ -0.3
IRF1-211ENST00000613424 CNTFRP26992 372 aa13.19□□□□□ -0.3
IRF1-211ENST00000613424 S100A5P33763 92 aa13.19□□□□□ -0.3
IRF1-211ENST00000613424 THBS3P49746 956 aa13.19□□□□□ -0.3
IRF1-211ENST00000613424 FXYD4P59646 89 aa13.19□□□□□ -0.3
IRF1-211ENST00000613424 KRTAP10-3P60369 221 aa13.19□□□□□ -0.3
IRF1-211ENST00000613424 ARSJQ5FYB0 599 aaPredicted RBP13.19□□□□□ -0.3
IRF1-211ENST00000613424 SECTM1Q8WVN6 248 aa13.19□□□□□ -0.3
IRF1-211ENST00000613424 ZNF2Q9BSG1 426 aaPredicted RBP13.19□□□□□ -0.3
IRF1-211ENST00000613424 CCL28Q9NRJ3 127 aa13.19□□□□□ -0.3
IRF1-211ENST00000613424 RBMX2Q9Y388 322 aaKnown RBP13.19□□□□□ -0.3
IRF1-211ENST00000613424 LINC00473A8K010 186 aa13.18□□□□□ -0.3
IRF1-211ENST00000613424 APOA2P02652 100 aa13.18□□□□□ -0.3
IRF1-211ENST00000613424 IGKV1-16P04430 117 aa13.18□□□□□ -0.3
IRF1-211ENST00000613424 VDAC2P45880 294 aaPredicted RBP13.18□□□□□ -0.3
IRF1-211ENST00000613424 SRSF4Q08170 494 aaKnown RBP13.18□□□□□ -0.3
IRF1-211ENST00000613424 MMDQ15546 238 aa13.18□□□□□ -0.3
IRF1-211ENST00000613424 TMEM95Q3KNT9 176 aa13.18□□□□□ -0.3
IRF1-211ENST00000613424 FAM71E2Q8N5Q1 922 aa13.18□□□□□ -0.3
IRF1-211ENST00000613424 NPBQ8NG41 125 aa13.18□□□□□ -0.3
IRF1-211ENST00000613424 OR6F1Q8NGZ6 308 aa13.18□□□□□ -0.3
IRF1-211ENST00000613424 SMIM4Q8WVI0 70 aa13.18□□□□□ -0.3
IRF1-211ENST00000613424 WFDC12Q8WWY7 111 aa13.18□□□□□ -0.3
IRF1-211ENST00000613424 ADTRPQ96IZ2 230 aa13.18□□□□□ -0.3
IRF1-211ENST00000613424 RNF5Q99942 180 aa13.18□□□□□ -0.3
IRF1-211ENST00000613424 RASL11BQ9BPW5 248 aa13.18□□□□□ -0.3
IRF1-211ENST00000613424 SLC5A7Q9GZV3 580 aa13.18□□□□□ -0.3
IRF1-211ENST00000613424 SLC35D1Q9NTN3 355 aa13.18□□□□□ -0.3
IRF1-211ENST00000613424 A6NHS1 94 aa13.17□□□□□ -0.3
IRF1-211ENST00000613424 M0QYG6 137 aa13.17□□□□□ -0.3
IRF1-211ENST00000613424 NBR2O15453 112 aa13.17□□□□□ -0.3
IRF1-211ENST00000613424 CD3DP04234 171 aa13.17□□□□□ -0.3
IRF1-211ENST00000613424 HERV-K104P61576 105 aa13.17□□□□□ -0.3
IRF1-211ENST00000613424 TSPAN5P62079 268 aa13.17□□□□□ -0.3
IRF1-211ENST00000613424 TAGLNQ01995 201 aaKnown RBP13.17□□□□□ -0.3
IRF1-211ENST00000613424 ACTBL2Q562R1 376 aa13.17□□□□□ -0.3
IRF1-211ENST00000613424 VAX1Q5SQQ9 334 aa13.17□□□□□ -0.3
IRF1-211ENST00000613424 PDPNQ86YL7 162 aa13.17□□□□□ -0.3
IRF1-211ENST00000613424 TMEM229BQ8NBD8 167 aa13.17□□□□□ -0.3
IRF1-211ENST00000613424 BVESQ8NE79 360 aa13.17□□□□□ -0.3
IRF1-211ENST00000613424 DDB2Q92466 427 aa13.17□□□□□ -0.3
IRF1-211ENST00000613424 FLYWCH2Q96CP2 140 aaKnown RBP13.17□□□□□ -0.3
IRF1-211ENST00000613424 LIN7CQ9NUP9 197 aaKnown RBP13.17□□□□□ -0.3
IRF1-211ENST00000613424 GSTZ1O43708 216 aaPredicted RBP13.16□□□□□ -0.3
IRF1-211ENST00000613424 PEX14O75381 377 aa13.16□□□□□ -0.3
IRF1-211ENST00000613424 NDUFA3O95167 84 aa13.16□□□□□ -0.3
IRF1-211ENST00000613424 VSIG10L2P0DP72 767 aa13.16□□□□□ -0.3
IRF1-211ENST00000613424 RPS16P62249 146 aaKnown RBP13.16□□□□□ -0.3
IRF1-211ENST00000613424 RPL30P62888 115 aaKnown RBP13.16□□□□□ -0.3
IRF1-211ENST00000613424 SSBP1Q04837 148 aaKnown RBP13.16□□□□□ -0.3
IRF1-211ENST00000613424 EIF4EBP1Q13541 118 aaPredicted RBP13.16□□□□□ -0.3
IRF1-211ENST00000613424 MSMO1Q15800 293 aa13.16□□□□□ -0.3
IRF1-211ENST00000613424 ZNF818PQ6ZRF7 136 aa13.16□□□□□ -0.3
IRF1-211ENST00000613424 CCDC190Q86UF4 302 aa13.16□□□□□ -0.3
IRF1-211ENST00000613424 TMEM17Q86X19 198 aa13.16□□□□□ -0.3
IRF1-211ENST00000613424 MFSD4AQ8N468 514 aa13.16□□□□□ -0.3
IRF1-211ENST00000613424 KLHDC1Q8N7A1 406 aa13.16□□□□□ -0.3
IRF1-211ENST00000613424 ZBTB34Q8NCN2 500 aa13.16□□□□□ -0.3
IRF1-211ENST00000613424 MOB3AQ96BX8 217 aa13.16□□□□□ -0.3
IRF1-211ENST00000613424 TINAGL1Q9GZM7 467 aaPredicted RBP13.16□□□□□ -0.3
IRF1-211ENST00000613424 WNT10AQ9GZT5 417 aa13.16□□□□□ -0.3
IRF1-211ENST00000613424 LINC01548A6NM66 108 aa13.15□□□□□ -0.3
IRF1-211ENST00000613424 IGHG2P01859 326 aa13.15□□□□□ -0.3
IRF1-211ENST00000613424 RRASP10301 218 aa13.15□□□□□ -0.3
IRF1-211ENST00000613424 GNRHRP30968 328 aa13.15□□□□□ -0.3
IRF1-211ENST00000613424 TAS2R19P59542 299 aa13.15□□□□□ -0.3
IRF1-211ENST00000613424 C5orf64Q2M2E5 130 aa13.15□□□□□ -0.3
IRF1-211ENST00000613424 RNASE10Q5GAN6 216 aaKnown RBP13.15□□□□□ -0.3
IRF1-211ENST00000613424 SHISA2Q6UWI4 295 aa13.15□□□□□ -0.3
IRF1-211ENST00000613424 ZNF66Q6ZN08 573 aa13.15□□□□□ -0.3
IRF1-211ENST00000613424 OR6Q1Q8NGQ2 317 aa13.15□□□□□ -0.3
IRF1-211ENST00000613424 GPHA2Q96T91 129 aa13.15□□□□□ -0.3
IRF1-211ENST00000613424 HSD17B10Q99714 261 aaKnown RBP13.15□□□□□ -0.3
IRF1-211ENST00000613424 TAS2R8Q9NYW2 309 aa13.15□□□□□ -0.3
IRF1-211ENST00000613424 KIAA1456Q9P272 454 aa13.15□□□□□ -0.3
IRF1-211ENST00000613424 ZNF107Q9UII5 783 aaPredicted RBP13.15□□□□□ -0.3
IRF1-211ENST00000613424 V9GYH0 126 aa13.15□□□□□ -0.3
IRF1-211ENST00000613424 RRHO14718 337 aa13.14□□□□□ -0.31
IRF1-211ENST00000613424 TNFSF12O43508 249 aa13.14□□□□□ -0.31
IRF1-211ENST00000613424 CD74P04233 296 aa13.14□□□□□ -0.31
IRF1-211ENST00000613424 IFNA6P05013 189 aa13.14□□□□□ -0.31
IRF1-211ENST00000613424 TBPP20226 339 aa13.14□□□□□ -0.31
IRF1-211ENST00000613424 CBX3Q13185 183 aa13.14□□□□□ -0.31
IRF1-211ENST00000613424 PSG5Q15238 335 aa13.14□□□□□ -0.31
IRF1-211ENST00000613424 RTL8BQ17RB0 113 aa13.14□□□□□ -0.31
IRF1-211ENST00000613424 TMEM177Q53S58 311 aa13.14□□□□□ -0.31
IRF1-211ENST00000613424 LIN54Q6MZP7 749 aa13.14□□□□□ -0.31
IRF1-211ENST00000613424 STEAP1BQ6NZ63 245 aa13.14□□□□□ -0.31
IRF1-211ENST00000613424 KCTD9Q7L273 389 aa13.14□□□□□ -0.31
IRF1-211ENST00000613424 SLC35E3Q7Z769 313 aa13.14□□□□□ -0.31
IRF1-211ENST00000613424 OR4D10Q8NGI6 311 aa13.14□□□□□ -0.31
IRF1-211ENST00000613424 TSNAXQ99598 290 aaKnown RBP13.14□□□□□ -0.31
IRF1-211ENST00000613424 CITED1Q99966 193 aa13.14□□□□□ -0.31
IRF1-211ENST00000613424 FXYD6Q9H0Q3 95 aa13.14□□□□□ -0.31
IRF1-211ENST00000613424 PRELID3BQ9Y3B1 194 aa13.14□□□□□ -0.31
IRF1-211ENST00000613424 SRRM4A7MD48 611 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms