RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 RANBP3Q9H6Z4 567 aaPredicted RBP14.5□□□□□ -0.09
LIG1-216ENST00000598938 TSPAN9O75954 239 aa14.49□□□□□ -0.09
LIG1-216ENST00000598938 CSF1P09603 554 aa14.49□□□□□ -0.09
LIG1-216ENST00000598938 MC5RP33032 325 aa14.49□□□□□ -0.09
LIG1-216ENST00000598938 LINC00205P59089 165 aa14.49□□□□□ -0.09
LIG1-216ENST00000598938 FXYD4P59646 89 aa14.49□□□□□ -0.09
LIG1-216ENST00000598938 HERV-K104P61576 105 aa14.49□□□□□ -0.09
LIG1-216ENST00000598938 DEFA6Q01524 100 aa14.49□□□□□ -0.09
LIG1-216ENST00000598938 HNF4GQ14541 408 aa14.49□□□□□ -0.09
LIG1-216ENST00000598938 STEAP1BQ6NZ63 245 aa14.49□□□□□ -0.09
LIG1-216ENST00000598938 TREML4Q6UXN2 200 aa14.49□□□□□ -0.09
LIG1-216ENST00000598938 Q6ZSV7 163 aa14.49□□□□□ -0.09
LIG1-216ENST00000598938 SECTM1Q8WVN6 248 aa14.49□□□□□ -0.09
LIG1-216ENST00000598938 RBMXL1Q96E39 390 aaKnown RBP14.49□□□□□ -0.09
LIG1-216ENST00000598938 AKR1E2Q96JD6 320 aa14.49□□□□□ -0.09
LIG1-216ENST00000598938 TINAGL1Q9GZM7 467 aaPredicted RBP14.49□□□□□ -0.09
LIG1-216ENST00000598938 NPFFR1Q9GZQ6 430 aa14.49□□□□□ -0.09
LIG1-216ENST00000598938 SLC5A7Q9GZV3 580 aa14.49□□□□□ -0.09
LIG1-216ENST00000598938 FXYD6Q9H0Q3 95 aa14.49□□□□□ -0.09
LIG1-216ENST00000598938 TAS2R8Q9NYW2 309 aa14.49□□□□□ -0.09
LIG1-216ENST00000598938 PTTG2Q9NZH5 202 aa14.49□□□□□ -0.09
LIG1-216ENST00000598938 MOB4Q9Y3A3 225 aa14.49□□□□□ -0.09
LIG1-216ENST00000598938 TRRAPQ9Y4A5 3859 aa14.48□□□□□ -0.09
LIG1-216ENST00000598938 ANKRD20A5PA0PJZ0 165 aa14.48□□□□□ -0.09
LIG1-216ENST00000598938 DUTP33316 252 aaKnown RBP14.48□□□□□ -0.09
LIG1-216ENST00000598938 THBS3P49746 956 aa14.48□□□□□ -0.09
LIG1-216ENST00000598938 RAG2P55895 527 aa14.48□□□□□ -0.09
LIG1-216ENST00000598938 TSPAN5P62079 268 aa14.48□□□□□ -0.09
LIG1-216ENST00000598938 EIF4EBP1Q13541 118 aaPredicted RBP14.48□□□□□ -0.09
LIG1-216ENST00000598938 LINC00299Q6ZSB3 139 aa14.48□□□□□ -0.09
LIG1-216ENST00000598938 Q8N402 240 aa14.48□□□□□ -0.09
LIG1-216ENST00000598938 ARRDC1Q8N5I2 433 aa14.48□□□□□ -0.09
LIG1-216ENST00000598938 OR4D10Q8NGI6 311 aa14.48□□□□□ -0.09
LIG1-216ENST00000598938 TRIM63Q969Q1 353 aa14.48□□□□□ -0.09
LIG1-216ENST00000598938 ADTRPQ96IZ2 230 aa14.48□□□□□ -0.09
LIG1-216ENST00000598938 THAP7Q9BT49 309 aaPredicted RBP14.48□□□□□ -0.09
LIG1-216ENST00000598938 SRRQ9GZT4 340 aa14.48□□□□□ -0.09
LIG1-216ENST00000598938 C16orf95Q9H693 158 aa14.48□□□□□ -0.09
LIG1-216ENST00000598938 CCL28Q9NRJ3 127 aa14.48□□□□□ -0.09
LIG1-216ENST00000598938 WASHC3Q9Y3C0 194 aa14.48□□□□□ -0.09
LIG1-216ENST00000598938 LINC00473A8K010 186 aa14.47□□□□□ -0.09
LIG1-216ENST00000598938 M0QZK8 103 aa14.47□□□□□ -0.09
LIG1-216ENST00000598938 FGF16O43320 207 aa14.47□□□□□ -0.09
LIG1-216ENST00000598938 RAB3DO95716 219 aa14.47□□□□□ -0.09
LIG1-216ENST00000598938 AMY1AP04745 511 aa14.47□□□□□ -0.09
LIG1-216ENST00000598938 AMY2AP04746 511 aa14.47□□□□□ -0.09
LIG1-216ENST00000598938 TMEM17Q86X19 198 aa14.47□□□□□ -0.09
LIG1-216ENST00000598938 ZBTB34Q8NCN2 500 aa14.47□□□□□ -0.09
LIG1-216ENST00000598938 OR8H1Q8NGG4 311 aa14.47□□□□□ -0.09
LIG1-216ENST00000598938 OR4C13Q8NGP0 309 aa14.47□□□□□ -0.09
LIG1-216ENST00000598938 DDB2Q92466 427 aa14.47□□□□□ -0.09
LIG1-216ENST00000598938 PLSCR3Q9NRY6 295 aa14.47□□□□□ -0.09
LIG1-216ENST00000598938 APOA2P02652 100 aa14.46□□□□□ -0.09
LIG1-216ENST00000598938 IFNA6P05013 189 aa14.46□□□□□ -0.09
LIG1-216ENST00000598938 AKAIN1P0CW23 69 aa14.46□□□□□ -0.09
LIG1-216ENST00000598938 TAGLNQ01995 201 aaKnown RBP14.46□□□□□ -0.09
LIG1-216ENST00000598938 MEF2DQ14814 521 aa14.46□□□□□ -0.09
LIG1-216ENST00000598938 AADACL3Q5VUY0 350 aa14.46□□□□□ -0.09
LIG1-216ENST00000598938 C11orf88Q6PI97 169 aa14.46□□□□□ -0.09
LIG1-216ENST00000598938 ZNF818PQ6ZRF7 136 aa14.46□□□□□ -0.09
LIG1-216ENST00000598938 LHFPL1Q86WI0 220 aa14.46□□□□□ -0.09
LIG1-216ENST00000598938 PDPNQ86YL7 162 aa14.46□□□□□ -0.09
LIG1-216ENST00000598938 Q8N2B8 174 aa14.46□□□□□ -0.09
LIG1-216ENST00000598938 C5orf56Q8N8D9 126 aa14.46□□□□□ -0.09
LIG1-216ENST00000598938 OR4F5Q8NH21 305 aa14.46□□□□□ -0.09
LIG1-216ENST00000598938 RITA1Q96K30 269 aa14.46□□□□□ -0.09
LIG1-216ENST00000598938 ZNF702PQ9H963 129 aa14.46□□□□□ -0.09
LIG1-216ENST00000598938 SLC35D1Q9NTN3 355 aa14.46□□□□□ -0.09
LIG1-216ENST00000598938 VWFP04275 2813 aa14.46□□□□□ -0.1
LIG1-216ENST00000598938 H7C2Y5 167 aa14.45□□□□□ -0.1
LIG1-216ENST00000598938 ZNF735P0CB33 412 aa14.45□□□□□ -0.1
LIG1-216ENST00000598938 GNRHRP30968 328 aa14.45□□□□□ -0.1
LIG1-216ENST00000598938 F2RL1P55085 397 aa14.45□□□□□ -0.1
LIG1-216ENST00000598938 RPL30P62888 115 aaKnown RBP14.45□□□□□ -0.1
LIG1-216ENST00000598938 BLCAPP62952 87 aa14.45□□□□□ -0.1
LIG1-216ENST00000598938 ZNF45Q02386 682 aa14.45□□□□□ -0.1
LIG1-216ENST00000598938 ZNF66Q6ZN08 573 aa14.45□□□□□ -0.1
LIG1-216ENST00000598938 MFSD4AQ8N468 514 aa14.45□□□□□ -0.1
LIG1-216ENST00000598938 GDPD1Q8N9F7 314 aa14.45□□□□□ -0.1
LIG1-216ENST00000598938 Q8N9W7 124 aa14.45□□□□□ -0.1
LIG1-216ENST00000598938 OR4C16Q8NGL9 310 aa14.45□□□□□ -0.1
LIG1-216ENST00000598938 BORCS5Q969J3 196 aa14.45□□□□□ -0.1
LIG1-216ENST00000598938 HSD17B10Q99714 261 aaKnown RBP14.45□□□□□ -0.1
LIG1-216ENST00000598938 PRSS22Q9GZN4 317 aa14.45□□□□□ -0.1
LIG1-216ENST00000598938 MMP24Q9Y5R2 645 aa14.45□□□□□ -0.1
LIG1-216ENST00000598938 NCBP2LA6PVI3 153 aaKnown RBP14.44□□□□□ -0.1
LIG1-216ENST00000598938 IGKV1-16P04430 117 aa14.44□□□□□ -0.1
LIG1-216ENST00000598938 MDKP21741 143 aaPredicted RBP14.44□□□□□ -0.1
LIG1-216ENST00000598938 UCP3P55916 312 aa14.44□□□□□ -0.1
LIG1-216ENST00000598938 KLF9Q13886 244 aaPredicted RBP14.44□□□□□ -0.1
LIG1-216ENST00000598938 FAAP20Q6NZ36 180 aa14.44□□□□□ -0.1
LIG1-216ENST00000598938 KCTD9Q7L273 389 aa14.44□□□□□ -0.1
LIG1-216ENST00000598938 FAM71E2Q8N5Q1 922 aa14.44□□□□□ -0.1
LIG1-216ENST00000598938 BVESQ8NE79 360 aa14.44□□□□□ -0.1
LIG1-216ENST00000598938 NPBQ8NG41 125 aa14.44□□□□□ -0.1
LIG1-216ENST00000598938 LINC01006Q8NI28 216 aa14.44□□□□□ -0.1
LIG1-216ENST00000598938 SDHCQ99643 169 aaPredicted RBP14.44□□□□□ -0.1
LIG1-216ENST00000598938 RNF5Q99942 180 aa14.44□□□□□ -0.1
LIG1-216ENST00000598938 BEX1Q9HBH7 125 aa14.44□□□□□ -0.1
LIG1-216ENST00000598938 AKIP1Q9NQ31 210 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms