RNA–Protein interactions for RNA: ENST00000598553.1

VRK3-214, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 595 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-214ENST00000598553 OR11H1Q8NG94 326 aa8.27□□□□□ -1.09
VRK3-214ENST00000598553 OR5AN1Q8NGI8 311 aa8.27□□□□□ -1.09
VRK3-214ENST00000598553 OR8U1Q8NH10 309 aa8.27□□□□□ -1.09
VRK3-214ENST00000598553 C4orf3Q8WVX3 66 aa8.27□□□□□ -1.09
VRK3-214ENST00000598553 DPF1Q92782 380 aa8.27□□□□□ -1.09
VRK3-214ENST00000598553 CLCC1Q96S66 551 aa8.27□□□□□ -1.09
VRK3-214ENST00000598553 DCSTAMPQ9H295 470 aa8.27□□□□□ -1.09
VRK3-214ENST00000598553 RIMS4Q9H426 269 aaPredicted RBP8.27□□□□□ -1.09
VRK3-214ENST00000598553 RNF167Q9H6Y7 350 aa8.27□□□□□ -1.09
VRK3-214ENST00000598553 AKIP1Q9NQ31 210 aa8.27□□□□□ -1.09
VRK3-214ENST00000598553 C12orf4Q9NQ89 552 aa8.27□□□□□ -1.09
VRK3-214ENST00000598553 RDH8Q9NYR8 311 aa8.27□□□□□ -1.09
VRK3-214ENST00000598553 PIPOXQ9P0Z9 390 aa8.27□□□□□ -1.09
VRK3-214ENST00000598553 MGAT4AQ9UM21 535 aa8.27□□□□□ -1.09
VRK3-214ENST00000598553 COL7A1Q02388 2944 aa8.26□□□□□ -1.09
VRK3-214ENST00000598553 TRAV41A0A0B4J266 112 aa8.26□□□□□ -1.09
VRK3-214ENST00000598553 TRDV1A0A1B0GX56 115 aa8.26□□□□□ -1.09
VRK3-214ENST00000598553 A0A1W2PN81 502 aa8.26□□□□□ -1.09
VRK3-214ENST00000598553 IFITM5A6NNB3 132 aa8.26□□□□□ -1.09
VRK3-214ENST00000598553 I3L521 148 aa8.26□□□□□ -1.09
VRK3-214ENST00000598553 ITGB1BP1O14713 200 aa8.26□□□□□ -1.09
VRK3-214ENST00000598553 RAB29O14966 203 aa8.26□□□□□ -1.09
VRK3-214ENST00000598553 IGLV2-23P01705 113 aa8.26□□□□□ -1.09
VRK3-214ENST00000598553 CD40LGP29965 261 aa8.26□□□□□ -1.09
VRK3-214ENST00000598553 CHRNA7P36544 502 aa8.26□□□□□ -1.09
VRK3-214ENST00000598553 SLURP1P55000 103 aa8.26□□□□□ -1.09
VRK3-214ENST00000598553 CX3CL1P78423 397 aa8.26□□□□□ -1.09
VRK3-214ENST00000598553 MRGPRG-AS1Q2M3A8 158 aa8.26□□□□□ -1.09
VRK3-214ENST00000598553 TRIM16LQ309B1 348 aa8.26□□□□□ -1.09
VRK3-214ENST00000598553 DEFB121Q5J5C9 76 aa8.26□□□□□ -1.09
VRK3-214ENST00000598553 LIN54Q6MZP7 749 aa8.26□□□□□ -1.09
VRK3-214ENST00000598553 CENPSQ8N2Z9 138 aa8.26□□□□□ -1.09
VRK3-214ENST00000598553 MCFD2Q8NI22 146 aa8.26□□□□□ -1.09
VRK3-214ENST00000598553 PTX4Q96A99 478 aa8.26□□□□□ -1.09
VRK3-214ENST00000598553 CHCHD6Q9BRQ6 235 aa8.26□□□□□ -1.09
VRK3-214ENST00000598553 CABLES2Q9BTV7 478 aa8.26□□□□□ -1.09
VRK3-214ENST00000598553 hCG_2014768A0A024R1R8 64 aa8.25□□□□□ -1.09
VRK3-214ENST00000598553 IGHV4OR15-8A0A075B7B6 117 aa8.25□□□□□ -1.09
VRK3-214ENST00000598553 A0A087WW49 117 aa8.25□□□□□ -1.09
VRK3-214ENST00000598553 TRAV1-2A0A0B4J238 106 aa8.25□□□□□ -1.09
VRK3-214ENST00000598553 OR5H14A6NHG9 310 aa8.25□□□□□ -1.09
VRK3-214ENST00000598553 TRDCB7Z8K6 153 aa8.25□□□□□ -1.09
VRK3-214ENST00000598553 H7C2Y5 167 aa8.25□□□□□ -1.09
VRK3-214ENST00000598553 J3QRK9 145 aa8.25□□□□□ -1.09
VRK3-214ENST00000598553 FABP7O15540 132 aa8.25□□□□□ -1.09
VRK3-214ENST00000598553 CA2P00918 260 aa8.25□□□□□ -1.09
VRK3-214ENST00000598553 CLEC2LP0C7M8 214 aa8.25□□□□□ -1.09
VRK3-214ENST00000598553 ZBTB25P24278 435 aa8.25□□□□□ -1.09
VRK3-214ENST00000598553 S100A5P33763 92 aa8.25□□□□□ -1.09
VRK3-214ENST00000598553 RANBP1P43487 201 aa8.25□□□□□ -1.09
VRK3-214ENST00000598553 CRIP2P52943 208 aaPredicted RBP8.25□□□□□ -1.09
VRK3-214ENST00000598553 PPP5CP53041 499 aa8.25□□□□□ -1.09
VRK3-214ENST00000598553 NCS1P62166 190 aa8.25□□□□□ -1.09
VRK3-214ENST00000598553 PJVKQ0ZLH3 352 aa8.25□□□□□ -1.09
VRK3-214ENST00000598553 PSG5Q15238 335 aa8.25□□□□□ -1.09
VRK3-214ENST00000598553 OR56B1Q8NGI3 324 aa8.25□□□□□ -1.09
VRK3-214ENST00000598553 OR10R2Q8NGX6 335 aa8.25□□□□□ -1.09
VRK3-214ENST00000598553 EDARADDQ8WWZ3 215 aa8.25□□□□□ -1.09
VRK3-214ENST00000598553 SLIRPQ9GZT3 109 aaKnown RBP8.25□□□□□ -1.09
VRK3-214ENST00000598553 NXF2Q9GZY0 626 aaKnown RBP8.25□□□□□ -1.09
VRK3-214ENST00000598553 GHITMQ9H3K2 345 aa8.25□□□□□ -1.09
VRK3-214ENST00000598553 SDHAF2Q9NX18 166 aa8.25□□□□□ -1.09
VRK3-214ENST00000598553 KIAA1456Q9P272 454 aa8.25□□□□□ -1.09
VRK3-214ENST00000598553 METTL1Q9UBP6 276 aaKnown RBP8.25□□□□□ -1.09
VRK3-214ENST00000598553 WASHC3Q9Y3C0 194 aa8.25□□□□□ -1.09
VRK3-214ENST00000598553 NUBP2Q9Y5Y2 271 aa8.25□□□□□ -1.09
VRK3-214ENST00000598553 SRRM4A7MD48 611 aaKnown RBP8.24□□□□□ -1.09
VRK3-214ENST00000598553 SEC14L6B5MCN3 397 aa8.24□□□□□ -1.09
VRK3-214ENST00000598553 M0R1X1 148 aa8.24□□□□□ -1.09
VRK3-214ENST00000598553 BET1O15155 118 aa8.24□□□□□ -1.09
VRK3-214ENST00000598553 HSPA12AO43301 675 aa8.24□□□□□ -1.09
VRK3-214ENST00000598553 RBMXL2O75526 392 aaKnown RBP8.24□□□□□ -1.09
VRK3-214ENST00000598553 IGHV3-11P01762 117 aa8.24□□□□□ -1.09
VRK3-214ENST00000598553 CRYGBP07316 175 aa8.24□□□□□ -1.09
VRK3-214ENST00000598553 OR8U9P0C7N5 309 aa8.24□□□□□ -1.09
VRK3-214ENST00000598553 HIST1H1DP16402 221 aaKnown RBP8.24□□□□□ -1.09
VRK3-214ENST00000598553 GADD45AP24522 165 aa8.24□□□□□ -1.09
VRK3-214ENST00000598553 RAB9AP51151 201 aa8.24□□□□□ -1.09
VRK3-214ENST00000598553 PSMD7P51665 324 aa8.24□□□□□ -1.09
VRK3-214ENST00000598553 LSM3P62310 102 aaKnown RBP8.24□□□□□ -1.09
VRK3-214ENST00000598553 ZNF45Q02386 682 aa8.24□□□□□ -1.09
VRK3-214ENST00000598553 HAPLN4Q86UW8 402 aa8.24□□□□□ -1.09
VRK3-214ENST00000598553 MFSD4AQ8N468 514 aa8.24□□□□□ -1.09
VRK3-214ENST00000598553 OR5M8Q8NGP6 311 aa8.24□□□□□ -1.09
VRK3-214ENST00000598553 DCUN1D4Q92564 292 aa8.24□□□□□ -1.09
VRK3-214ENST00000598553 RAB3CQ96E17 227 aa8.24□□□□□ -1.09
VRK3-214ENST00000598553 TOLLIPQ9H0E2 274 aa8.24□□□□□ -1.09
VRK3-214ENST00000598553 OR2D2Q9H210 308 aa8.24□□□□□ -1.09
VRK3-214ENST00000598553 OR51E2Q9H255 320 aa8.24□□□□□ -1.09
VRK3-214ENST00000598553 TXNL4BQ9NX01 149 aaKnown RBP8.24□□□□□ -1.09
VRK3-214ENST00000598553 DAPK2Q9UIK4 370 aa8.24□□□□□ -1.09
VRK3-214ENST00000598553 RAB22AQ9UL26 194 aa8.24□□□□□ -1.09
VRK3-214ENST00000598553 LSM4Q9Y4Z0 139 aaKnown RBP8.24□□□□□ -1.09
VRK3-214ENST00000598553 TRBV6-7A0A0A0MS04 114 aa8.23□□□□□ -1.09
VRK3-214ENST00000598553 SLC25A17O43808 307 aa8.23□□□□□ -1.09
VRK3-214ENST00000598553 SSX5O60225 188 aa8.23□□□□□ -1.09
VRK3-214ENST00000598553 RBBP9O75884 186 aa8.23□□□□□ -1.09
VRK3-214ENST00000598553 HNRNPCP07910 306 aaKnown RBP eCLIP8.23□□□□□ -1.09
VRK3-214ENST00000598553 GSTP1P09211 210 aaKnown RBP8.23□□□□□ -1.09
VRK3-214ENST00000598553 RAB3BP20337 219 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms