RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 FAM71F2Q6NXP2 309 aa11.83□□□□□ -0.52
TGFB1-202ENST00000597453 ZNF833PQ6ZTB9 187 aa11.83□□□□□ -0.52
TGFB1-202ENST00000597453 TOLLIPQ9H0E2 274 aa11.83□□□□□ -0.52
TGFB1-202ENST00000597453 PARP12Q9H0J9 701 aaKnown RBP11.83□□□□□ -0.52
TGFB1-202ENST00000597453 DCSTAMPQ9H295 470 aa11.83□□□□□ -0.52
TGFB1-202ENST00000597453 DIABLOQ9NR28 239 aa11.83□□□□□ -0.52
TGFB1-202ENST00000597453 PIPOXQ9P0Z9 390 aa11.83□□□□□ -0.52
TGFB1-202ENST00000597453 ZNF230Q9UIE0 474 aaPredicted RBP11.83□□□□□ -0.52
TGFB1-202ENST00000597453 ZNF580Q9UK33 172 aa11.83□□□□□ -0.52
TGFB1-202ENST00000597453 TRAV18A0A075B6X5 111 aa11.82□□□□□ -0.52
TGFB1-202ENST00000597453 SAA2-SAA4A0A096LPE2 208 aa11.82□□□□□ -0.52
TGFB1-202ENST00000597453 RAB29O14966 203 aa11.82□□□□□ -0.52
TGFB1-202ENST00000597453 ST8SIA5O15466 376 aa11.82□□□□□ -0.52
TGFB1-202ENST00000597453 GSTT2P0CG29 244 aa11.82□□□□□ -0.52
TGFB1-202ENST00000597453 GSTT2BP0CG30 244 aa11.82□□□□□ -0.52
TGFB1-202ENST00000597453 SAA2P0DJI9 122 aaPredicted RBP11.82□□□□□ -0.52
TGFB1-202ENST00000597453 CEACAM6P40199 344 aa11.82□□□□□ -0.52
TGFB1-202ENST00000597453 OR3A3P47888 321 aa11.82□□□□□ -0.52
TGFB1-202ENST00000597453 GNG2P59768 71 aa11.82□□□□□ -0.52
TGFB1-202ENST00000597453 ACTBP60709 375 aa11.82□□□□□ -0.52
TGFB1-202ENST00000597453 FHL3Q13643 280 aa11.82□□□□□ -0.52
TGFB1-202ENST00000597453 SAMD12Q8N8I0 201 aa11.82□□□□□ -0.52
TGFB1-202ENST00000597453 OR5M8Q8NGP6 311 aa11.82□□□□□ -0.52
TGFB1-202ENST00000597453 NUDCD2Q8WVJ2 157 aa11.82□□□□□ -0.52
TGFB1-202ENST00000597453 C4orf3Q8WVX3 66 aa11.82□□□□□ -0.52
TGFB1-202ENST00000597453 MAFIPQ8WZ33 124 aa11.82□□□□□ -0.52
TGFB1-202ENST00000597453 NABP2Q9BQ15 211 aa11.82□□□□□ -0.52
TGFB1-202ENST00000597453 GHITMQ9H3K2 345 aa11.82□□□□□ -0.52
TGFB1-202ENST00000597453 HUWE1Q7Z6Z7 4374 aaKnown RBP11.82□□□□□ -0.52
TGFB1-202ENST00000597453 TRBV6-7A0A0A0MS04 114 aa11.81□□□□□ -0.52
TGFB1-202ENST00000597453 G3V318 75 aa11.81□□□□□ -0.52
TGFB1-202ENST00000597453 SSX5O60225 188 aa11.81□□□□□ -0.52
TGFB1-202ENST00000597453 PPIFP30405 207 aaKnown RBP11.81□□□□□ -0.52
TGFB1-202ENST00000597453 IGSF11Q5DX21 431 aa11.81□□□□□ -0.52
TGFB1-202ENST00000597453 MYOZ3Q8TDC0 251 aa11.81□□□□□ -0.52
TGFB1-202ENST00000597453 ACOT12Q8WYK0 555 aa11.81□□□□□ -0.52
TGFB1-202ENST00000597453 S100A16Q96FQ6 103 aaKnown RBP11.81□□□□□ -0.52
TGFB1-202ENST00000597453 PRR25Q96S07 402 aa11.81□□□□□ -0.52
TGFB1-202ENST00000597453 AGMATQ9BSE5 352 aa11.81□□□□□ -0.52
TGFB1-202ENST00000597453 C11orf54Q9H0W9 315 aaPredicted RBP11.81□□□□□ -0.52
TGFB1-202ENST00000597453 KLK15Q9H2R5 256 aa11.81□□□□□ -0.52
TGFB1-202ENST00000597453 AUNIPQ9H7T9 357 aa11.81□□□□□ -0.52
TGFB1-202ENST00000597453 RDH8Q9NYR8 311 aa11.81□□□□□ -0.52
TGFB1-202ENST00000597453 WSB1Q9Y6I7 421 aa11.81□□□□□ -0.52
TGFB1-202ENST00000597453 IGHV7-81A0A0B4J1V7 117 aa11.8□□□□□ -0.52
TGFB1-202ENST00000597453 A0A1B0GVG6 124 aa11.8□□□□□ -0.52
TGFB1-202ENST00000597453 BET1O15155 118 aa11.8□□□□□ -0.52
TGFB1-202ENST00000597453 ATP6V0E1O15342 81 aa11.8□□□□□ -0.52
TGFB1-202ENST00000597453 XRCC3O43542 346 aa11.8□□□□□ -0.52
TGFB1-202ENST00000597453 RAMP3O60896 148 aa11.8□□□□□ -0.52
TGFB1-202ENST00000597453 OR5H8P0DN80 308 aa11.8□□□□□ -0.52
TGFB1-202ENST00000597453 RORCP51449 518 aa11.8□□□□□ -0.52
TGFB1-202ENST00000597453 KIAA0141Q14154 515 aaPredicted RBP11.8□□□□□ -0.52
TGFB1-202ENST00000597453 C9orf66Q5T8R8 295 aa11.8□□□□□ -0.52
TGFB1-202ENST00000597453 OR11H1Q8NG94 326 aa11.8□□□□□ -0.52
TGFB1-202ENST00000597453 OR10J5Q8NHC4 309 aa11.8□□□□□ -0.52
TGFB1-202ENST00000597453 CMTM3Q96MX0 182 aa11.8□□□□□ -0.52
TGFB1-202ENST00000597453 ZNF251Q9BRH9 671 aa11.8□□□□□ -0.52
TGFB1-202ENST00000597453 DCUN1D5Q9BTE7 237 aa11.8□□□□□ -0.52
TGFB1-202ENST00000597453 ST6GALNAC5Q9BVH7 336 aa11.8□□□□□ -0.52
TGFB1-202ENST00000597453 OR51J1Q9H342 316 aa11.8□□□□□ -0.52
TGFB1-202ENST00000597453 GNB4Q9HAV0 340 aa11.8□□□□□ -0.52
TGFB1-202ENST00000597453 PARP11Q9NR21 331 aa11.8□□□□□ -0.52
TGFB1-202ENST00000597453 ZMAT5Q9UDW3 170 aaKnown RBP11.8□□□□□ -0.52
TGFB1-202ENST00000597453 STAB2Q8WWQ8 2551 aa11.8□□□□□ -0.52
TGFB1-202ENST00000597453 IGKV1D-8A0A087WSZ0 117 aa11.79□□□□□ -0.52
TGFB1-202ENST00000597453 SEC14L6B5MCN3 397 aa11.79□□□□□ -0.52
TGFB1-202ENST00000597453 NBR2O15453 112 aa11.79□□□□□ -0.52
TGFB1-202ENST00000597453 HLA-DRB1P01911 266 aa11.79□□□□□ -0.52
TGFB1-202ENST00000597453 RPL39P5Q59GN2 51 aa11.79□□□□□ -0.52
TGFB1-202ENST00000597453 TMEM69Q5SWH9 247 aa11.79□□□□□ -0.52
TGFB1-202ENST00000597453 ASPHD1Q5U4P2 390 aa11.79□□□□□ -0.52
TGFB1-202ENST00000597453 AP3S1Q92572 193 aa11.79□□□□□ -0.52
TGFB1-202ENST00000597453 ABHD14BQ96IU4 210 aa11.79□□□□□ -0.52
TGFB1-202ENST00000597453 GINS4Q9BRT9 223 aa11.79□□□□□ -0.52
TGFB1-202ENST00000597453 COMMD3Q9UBI1 195 aa11.79□□□□□ -0.52
TGFB1-202ENST00000597453 LSM4Q9Y4Z0 139 aaKnown RBP11.79□□□□□ -0.52
TGFB1-202ENST00000597453 SORL1Q92673 2214 aa11.79□□□□□ -0.52
TGFB1-202ENST00000597453 IGLV1-40P01703 118 aa11.78□□□□□ -0.52
TGFB1-202ENST00000597453 APOA1P02647 267 aa11.78□□□□□ -0.52
TGFB1-202ENST00000597453 EIF4EP06730 217 aaKnown RBP11.78□□□□□ -0.52
TGFB1-202ENST00000597453 CTXN2P0C2S0 81 aa11.78□□□□□ -0.52
TGFB1-202ENST00000597453 ZNF182P17025 639 aaPredicted RBP11.78□□□□□ -0.52
TGFB1-202ENST00000597453 ECI1P42126 302 aa11.78□□□□□ -0.52
TGFB1-202ENST00000597453 TAS2R20P59543 309 aa11.78□□□□□ -0.52
TGFB1-202ENST00000597453 NDPQ00604 133 aa11.78□□□□□ -0.52
TGFB1-202ENST00000597453 C5orf64Q2M2E5 130 aa11.78□□□□□ -0.52
TGFB1-202ENST00000597453 Q6ZNX1 250 aa11.78□□□□□ -0.52
TGFB1-202ENST00000597453 H1FOOQ8IZA3 346 aaPredicted RBP11.78□□□□□ -0.52
TGFB1-202ENST00000597453 ZNF491Q8N8L2 437 aa11.78□□□□□ -0.52
TGFB1-202ENST00000597453 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.78□□□□□ -0.52
TGFB1-202ENST00000597453 NPBQ8NG41 125 aa11.78□□□□□ -0.52
TGFB1-202ENST00000597453 S100ZQ8WXG8 99 aa11.78□□□□□ -0.52
TGFB1-202ENST00000597453 UBE2E2Q96LR5 201 aa11.78□□□□□ -0.52
TGFB1-202ENST00000597453 OR5B12Q96R08 314 aa11.78□□□□□ -0.52
TGFB1-202ENST00000597453 ANXA10Q9UJ72 324 aa11.78□□□□□ -0.52
TGFB1-202ENST00000597453 ZNF221Q9UK13 617 aa11.78□□□□□ -0.52
TGFB1-202ENST00000597453 FBXO7Q9Y3I1 522 aa11.78□□□□□ -0.52
TGFB1-202ENST00000597453 DNAH7Q8WXX0 4024 aa11.77□□□□□ -0.52
TGFB1-202ENST00000597453 TRAV41A0A0B4J266 112 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms