RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 RIMS4Q9H426 269 aaPredicted RBP10.5□□□□□ -0.73
SHKBP1-208ENST00000595726 C12orf4Q9NQ89 552 aa10.5□□□□□ -0.73
SHKBP1-208ENST00000595726 ABRACLQ9P1F3 81 aa10.5□□□□□ -0.73
SHKBP1-208ENST00000595726 RAB22AQ9UL26 194 aa10.5□□□□□ -0.73
SHKBP1-208ENST00000595726 STUB1Q9UNE7 303 aa10.5□□□□□ -0.73
SHKBP1-208ENST00000595726 A0A0B4J203 849 aa10.49□□□□□ -0.73
SHKBP1-208ENST00000595726 SMIM30A4D0T7 59 aa10.49□□□□□ -0.73
SHKBP1-208ENST00000595726 LANCL1O43813 399 aa10.49□□□□□ -0.73
SHKBP1-208ENST00000595726 DEDDO75618 318 aa10.49□□□□□ -0.73
SHKBP1-208ENST00000595726 RGS11O94810 467 aa10.49□□□□□ -0.73
SHKBP1-208ENST00000595726 HLA-DRB3P79483 266 aa10.49□□□□□ -0.73
SHKBP1-208ENST00000595726 MOGAT2Q3SYC2 334 aa10.49□□□□□ -0.73
SHKBP1-208ENST00000595726 CMSS1Q9BQ75 279 aaKnown RBP10.49□□□□□ -0.73
SHKBP1-208ENST00000595726 PARP11Q9NR21 331 aa10.49□□□□□ -0.73
SHKBP1-208ENST00000595726 ZNF580Q9UK33 172 aa10.49□□□□□ -0.73
SHKBP1-208ENST00000595726 PKHD1P08F94 4074 aa10.48□□□□□ -0.73
SHKBP1-208ENST00000595726 TRAV41A0A0B4J266 112 aa10.48□□□□□ -0.73
SHKBP1-208ENST00000595726 SOX15O60248 233 aa10.48□□□□□ -0.73
SHKBP1-208ENST00000595726 IGHV3-11P01762 117 aa10.48□□□□□ -0.73
SHKBP1-208ENST00000595726 LGALS1P09382 135 aaKnown RBP10.48□□□□□ -0.73
SHKBP1-208ENST00000595726 RAB6AP20340 208 aa10.48□□□□□ -0.73
SHKBP1-208ENST00000595726 LSAMPQ13449 338 aa10.48□□□□□ -0.73
SHKBP1-208ENST00000595726 OR2AK2Q8NG84 335 aa10.48□□□□□ -0.73
SHKBP1-208ENST00000595726 OR8H1Q8NGG4 311 aa10.48□□□□□ -0.73
SHKBP1-208ENST00000595726 CHCHD6Q9BRQ6 235 aa10.48□□□□□ -0.73
SHKBP1-208ENST00000595726 OR51E2Q9H255 320 aa10.48□□□□□ -0.73
SHKBP1-208ENST00000595726 IFI27L2Q9H2X8 130 aa10.48□□□□□ -0.73
SHKBP1-208ENST00000595726 Q9N2K0 584 aa10.48□□□□□ -0.73
SHKBP1-208ENST00000595726 MGAT4AQ9UM21 535 aa10.48□□□□□ -0.73
SHKBP1-208ENST00000595726 SSR3Q9UNL2 185 aa10.48□□□□□ -0.73
SHKBP1-208ENST00000595726 KCNK7Q9Y2U2 307 aa10.48□□□□□ -0.73
SHKBP1-208ENST00000595726 CEPT1Q9Y6K0 416 aa10.48□□□□□ -0.73
SHKBP1-208ENST00000595726 SAA2-SAA4A0A096LPE2 208 aa10.47□□□□□ -0.73
SHKBP1-208ENST00000595726 NOTOA8MTQ0 251 aa10.47□□□□□ -0.73
SHKBP1-208ENST00000595726 RAB27BO00194 218 aa10.47□□□□□ -0.73
SHKBP1-208ENST00000595726 ST8SIA5O15466 376 aa10.47□□□□□ -0.73
SHKBP1-208ENST00000595726 SAA2P0DJI9 122 aaPredicted RBP10.47□□□□□ -0.73
SHKBP1-208ENST00000595726 OR3A3P47888 321 aa10.47□□□□□ -0.73
SHKBP1-208ENST00000595726 PMS2P11Q13670 270 aa10.47□□□□□ -0.73
SHKBP1-208ENST00000595726 NEDD8Q15843 81 aa10.47□□□□□ -0.73
SHKBP1-208ENST00000595726 LINC00322Q6ZN03 302 aaPredicted RBP10.47□□□□□ -0.73
SHKBP1-208ENST00000595726 ZNF833PQ6ZTB9 187 aa10.47□□□□□ -0.73
SHKBP1-208ENST00000595726 MINDY2Q8NBR6 621 aa10.47□□□□□ -0.73
SHKBP1-208ENST00000595726 OR10R2Q8NGX6 335 aa10.47□□□□□ -0.73
SHKBP1-208ENST00000595726 PTX4Q96A99 478 aa10.47□□□□□ -0.73
SHKBP1-208ENST00000595726 RAB3CQ96E17 227 aa10.47□□□□□ -0.73
SHKBP1-208ENST00000595726 RITA1Q96K30 269 aa10.47□□□□□ -0.73
SHKBP1-208ENST00000595726 ELOVL1Q9BW60 279 aa10.47□□□□□ -0.73
SHKBP1-208ENST00000595726 MRPL20Q9BYC9 149 aaKnown RBP10.47□□□□□ -0.73
SHKBP1-208ENST00000595726 PARP12Q9H0J9 701 aaKnown RBP10.47□□□□□ -0.73
SHKBP1-208ENST00000595726 OR1A1Q9P1Q5 309 aa10.47□□□□□ -0.73
SHKBP1-208ENST00000595726 SLC23A1Q9UHI7 598 aa10.47□□□□□ -0.73
SHKBP1-208ENST00000595726 IGHV7-81A0A0B4J1V7 117 aa10.46□□□□□ -0.73
SHKBP1-208ENST00000595726 MFNGO00587 321 aa10.46□□□□□ -0.73
SHKBP1-208ENST00000595726 HSPB1P04792 205 aaKnown RBP10.46□□□□□ -0.73
SHKBP1-208ENST00000595726 SCTP09683 121 aa10.46□□□□□ -0.73
SHKBP1-208ENST00000595726 HIST1H1DP16402 221 aaKnown RBP10.46□□□□□ -0.73
SHKBP1-208ENST00000595726 FAM71F2Q6NXP2 309 aa10.46□□□□□ -0.73
SHKBP1-208ENST00000595726 TPRA1Q86W33 373 aa10.46□□□□□ -0.73
SHKBP1-208ENST00000595726 ZNF251Q9BRH9 671 aa10.46□□□□□ -0.73
SHKBP1-208ENST00000595726 THAP7Q9BT49 309 aaPredicted RBP10.46□□□□□ -0.73
SHKBP1-208ENST00000595726 FBXO7Q9Y3I1 522 aa10.46□□□□□ -0.73
SHKBP1-208ENST00000595726 IGKV1-6A0A0C4DH72 117 aa10.45□□□□□ -0.74
SHKBP1-208ENST00000595726 A0A1W2PN81 502 aa10.45□□□□□ -0.74
SHKBP1-208ENST00000595726 IZUMO1RA6ND01 250 aa10.45□□□□□ -0.74
SHKBP1-208ENST00000595726 CXorf65A6NEN9 183 aa10.45□□□□□ -0.74
SHKBP1-208ENST00000595726 ITGB1BP1O14713 200 aa10.45□□□□□ -0.74
SHKBP1-208ENST00000595726 FCGR3AP08637 254 aa10.45□□□□□ -0.74
SHKBP1-208ENST00000595726 CD3GP09693 182 aa10.45□□□□□ -0.74
SHKBP1-208ENST00000595726 GNB3P16520 340 aa10.45□□□□□ -0.74
SHKBP1-208ENST00000595726 CD36P16671 472 aa10.45□□□□□ -0.74
SHKBP1-208ENST00000595726 ZBTB25P24278 435 aa10.45□□□□□ -0.74
SHKBP1-208ENST00000595726 GADD45AP24522 165 aa10.45□□□□□ -0.74
SHKBP1-208ENST00000595726 CHRNA7P36544 502 aa10.45□□□□□ -0.74
SHKBP1-208ENST00000595726 MMDQ15546 238 aa10.45□□□□□ -0.74
SHKBP1-208ENST00000595726 SFXN4Q6P4A7 337 aa10.45□□□□□ -0.74
SHKBP1-208ENST00000595726 AGMATQ9BSE5 352 aa10.45□□□□□ -0.74
SHKBP1-208ENST00000595726 RNF167Q9H6Y7 350 aa10.45□□□□□ -0.74
SHKBP1-208ENST00000595726 PLEKHA3Q9HB20 300 aa10.45□□□□□ -0.74
SHKBP1-208ENST00000595726 PIPOXQ9P0Z9 390 aa10.45□□□□□ -0.74
SHKBP1-208ENST00000595726 DAPK2Q9UIK4 370 aa10.45□□□□□ -0.74
SHKBP1-208ENST00000595726 DYNC1H1Q14204 4646 aaKnown RBP10.44□□□□□ -0.74
SHKBP1-208ENST00000595726 A0A075B6Q4 140 aa10.44□□□□□ -0.74
SHKBP1-208ENST00000595726 LOC100506127A0A0U1RQW1 187 aa10.44□□□□□ -0.74
SHKBP1-208ENST00000595726 METTL21EPA6NDL7 271 aa10.44□□□□□ -0.74
SHKBP1-208ENST00000595726 TRDCB7Z8K6 153 aa10.44□□□□□ -0.74
SHKBP1-208ENST00000595726 RAB29O14966 203 aa10.44□□□□□ -0.74
SHKBP1-208ENST00000595726 SDC2P34741 201 aa10.44□□□□□ -0.74
SHKBP1-208ENST00000595726 CEACAM6P40199 344 aa10.44□□□□□ -0.74
SHKBP1-208ENST00000595726 MRPS15P82914 257 aaKnown RBP10.44□□□□□ -0.74
SHKBP1-208ENST00000595726 ECSCRQ19T08 205 aa10.44□□□□□ -0.74
SHKBP1-208ENST00000595726 RPL39P5Q59GN2 51 aa10.44□□□□□ -0.74
SHKBP1-208ENST00000595726 IL34Q6ZMJ4 242 aa10.44□□□□□ -0.74
SHKBP1-208ENST00000595726 GTSCR1Q86UQ5 136 aa10.44□□□□□ -0.74
SHKBP1-208ENST00000595726 EDARADDQ8WWZ3 215 aa10.44□□□□□ -0.74
SHKBP1-208ENST00000595726 FLYWCH2Q96CP2 140 aaKnown RBP10.44□□□□□ -0.74
SHKBP1-208ENST00000595726 ABHD14BQ96IU4 210 aa10.44□□□□□ -0.74
SHKBP1-208ENST00000595726 MS4A10Q96PG2 267 aa10.44□□□□□ -0.74
SHKBP1-208ENST00000595726 CABLES2Q9BTV7 478 aa10.44□□□□□ -0.74
SHKBP1-208ENST00000595726 CENPOQ9BU64 300 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms