RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 LINC00473A8K010 186 aa10.89□□□□□ -0.67
SHKBP1-207ENST00000595631 PPYP01298 95 aa10.89□□□□□ -0.67
SHKBP1-207ENST00000595631 IGHG2P01859 326 aa10.89□□□□□ -0.67
SHKBP1-207ENST00000595631 APOA2P02652 100 aa10.89□□□□□ -0.67
SHKBP1-207ENST00000595631 MC5RP33032 325 aa10.89□□□□□ -0.67
SHKBP1-207ENST00000595631 DUTP33316 252 aaKnown RBP10.89□□□□□ -0.67
SHKBP1-207ENST00000595631 RPL30P62888 115 aaKnown RBP10.89□□□□□ -0.67
SHKBP1-207ENST00000595631 BVESQ8NE79 360 aa10.89□□□□□ -0.67
SHKBP1-207ENST00000595631 OR5H2Q8NGV7 314 aa10.89□□□□□ -0.67
SHKBP1-207ENST00000595631 MCFD2Q8NI22 146 aa10.89□□□□□ -0.67
SHKBP1-207ENST00000595631 NXF2Q9GZY0 626 aaKnown RBP10.89□□□□□ -0.67
SHKBP1-207ENST00000595631 FBXL15Q9H469 300 aa10.89□□□□□ -0.67
SHKBP1-207ENST00000595631 CCL28Q9NRJ3 127 aa10.89□□□□□ -0.67
SHKBP1-207ENST00000595631 ZNF107Q9UII5 783 aaPredicted RBP10.89□□□□□ -0.67
SHKBP1-207ENST00000595631 RBMX2Q9Y388 322 aaKnown RBP10.89□□□□□ -0.67
SHKBP1-207ENST00000595631 FBXO24O75426 580 aa10.88□□□□□ -0.67
SHKBP1-207ENST00000595631 NDUFA3O95167 84 aa10.88□□□□□ -0.67
SHKBP1-207ENST00000595631 HRH1P35367 487 aa10.88□□□□□ -0.67
SHKBP1-207ENST00000595631 THBS3P49746 956 aa10.88□□□□□ -0.67
SHKBP1-207ENST00000595631 TAS2R46P59540 309 aa10.88□□□□□ -0.67
SHKBP1-207ENST00000595631 RPS16P62249 146 aaKnown RBP10.88□□□□□ -0.67
SHKBP1-207ENST00000595631 DGCR2P98153 550 aa10.88□□□□□ -0.67
SHKBP1-207ENST00000595631 C5orf64Q2M2E5 130 aa10.88□□□□□ -0.67
SHKBP1-207ENST00000595631 OR2B11Q5JQS5 317 aa10.88□□□□□ -0.67
SHKBP1-207ENST00000595631 ZNF660Q6AZW8 331 aaPredicted RBP10.88□□□□□ -0.67
SHKBP1-207ENST00000595631 OVCH2Q7RTZ1 564 aa10.88□□□□□ -0.67
SHKBP1-207ENST00000595631 CENPVQ7Z7K6 275 aaPredicted RBP10.88□□□□□ -0.67
SHKBP1-207ENST00000595631 ZNF329Q86UD4 541 aa10.88□□□□□ -0.67
SHKBP1-207ENST00000595631 PDPNQ86YL7 162 aa10.88□□□□□ -0.67
SHKBP1-207ENST00000595631 NPBQ8NG41 125 aa10.88□□□□□ -0.67
SHKBP1-207ENST00000595631 OR5AU1Q8NGC0 362 aa10.88□□□□□ -0.67
SHKBP1-207ENST00000595631 DDB2Q92466 427 aa10.88□□□□□ -0.67
SHKBP1-207ENST00000595631 DIRAS2Q96HU8 199 aa10.88□□□□□ -0.67
SHKBP1-207ENST00000595631 CITED2Q99967 270 aaPredicted RBP10.88□□□□□ -0.67
SHKBP1-207ENST00000595631 TPSG1Q9NRR2 321 aa10.88□□□□□ -0.67
SHKBP1-207ENST00000595631 TAS2R8Q9NYW2 309 aa10.88□□□□□ -0.67
SHKBP1-207ENST00000595631 KLK11Q9UBX7 282 aa10.88□□□□□ -0.67
SHKBP1-207ENST00000595631 M0QYG6 137 aa10.87□□□□□ -0.67
SHKBP1-207ENST00000595631 SULT1C2O00338 296 aa10.87□□□□□ -0.67
SHKBP1-207ENST00000595631 FCN1O00602 326 aa10.87□□□□□ -0.67
SHKBP1-207ENST00000595631 RRHO14718 337 aa10.87□□□□□ -0.67
SHKBP1-207ENST00000595631 TNFSF12O43508 249 aa10.87□□□□□ -0.67
SHKBP1-207ENST00000595631 TSPAN15O95858 294 aa10.87□□□□□ -0.67
SHKBP1-207ENST00000595631 TNFSF8P32971 234 aa10.87□□□□□ -0.67
SHKBP1-207ENST00000595631 RCVRNP35243 200 aa10.87□□□□□ -0.67
SHKBP1-207ENST00000595631 EIF4EBP1Q13541 118 aaPredicted RBP10.87□□□□□ -0.67
SHKBP1-207ENST00000595631 DYRK1AQ13627 763 aa10.87□□□□□ -0.67
SHKBP1-207ENST00000595631 PSG5Q15238 335 aa10.87□□□□□ -0.67
SHKBP1-207ENST00000595631 TCTEX1D4Q5JR98 221 aa10.87□□□□□ -0.67
SHKBP1-207ENST00000595631 FOXB2Q5VYV0 432 aa10.87□□□□□ -0.67
SHKBP1-207ENST00000595631 TMEM17Q86X19 198 aa10.87□□□□□ -0.67
SHKBP1-207ENST00000595631 GIMAP1Q8WWP7 306 aa10.87□□□□□ -0.67
SHKBP1-207ENST00000595631 CLCC1Q96S66 551 aa10.87□□□□□ -0.67
SHKBP1-207ENST00000595631 ZNF2Q9BSG1 426 aaPredicted RBP10.87□□□□□ -0.67
SHKBP1-207ENST00000595631 SLC5A7Q9GZV3 580 aa10.87□□□□□ -0.67
SHKBP1-207ENST00000595631 FXYD6Q9H0Q3 95 aa10.87□□□□□ -0.67
SHKBP1-207ENST00000595631 KIAA1456Q9P272 454 aa10.87□□□□□ -0.67
SHKBP1-207ENST00000595631 PSMB11A5LHX3 300 aa10.86□□□□□ -0.67
SHKBP1-207ENST00000595631 DPPA5A6NC42 116 aa10.86□□□□□ -0.67
SHKBP1-207ENST00000595631 RBBP9O75884 186 aa10.86□□□□□ -0.67
SHKBP1-207ENST00000595631 CRYZL1O95825 349 aa10.86□□□□□ -0.67
SHKBP1-207ENST00000595631 IGLV2-23P01705 113 aa10.86□□□□□ -0.67
SHKBP1-207ENST00000595631 HLA-DRB1P01911 266 aa10.86□□□□□ -0.67
SHKBP1-207ENST00000595631 HERV-K104P61576 105 aa10.86□□□□□ -0.67
SHKBP1-207ENST00000595631 NDPQ00604 133 aa10.86□□□□□ -0.67
SHKBP1-207ENST00000595631 IL18Q14116 193 aa10.86□□□□□ -0.67
SHKBP1-207ENST00000595631 NSUN5P1Q3KNT7 163 aa10.86□□□□□ -0.67
SHKBP1-207ENST00000595631 KCTD9Q7L273 389 aa10.86□□□□□ -0.67
SHKBP1-207ENST00000595631 FOXRED2Q8IWF2 684 aa10.86□□□□□ -0.67
SHKBP1-207ENST00000595631 STPG2Q8N412 459 aa10.86□□□□□ -0.67
SHKBP1-207ENST00000595631 FLYWCH2Q96CP2 140 aaKnown RBP10.86□□□□□ -0.67
SHKBP1-207ENST00000595631 ADTRPQ96IZ2 230 aa10.86□□□□□ -0.67
SHKBP1-207ENST00000595631 METTL1Q9UBP6 276 aaKnown RBP10.86□□□□□ -0.67
SHKBP1-207ENST00000595631 IGHV7-81A0A0B4J1V7 117 aa10.85□□□□□ -0.67
SHKBP1-207ENST00000595631 A0A1W2PRX2 142 aa10.85□□□□□ -0.67
SHKBP1-207ENST00000595631 SRRM4A7MD48 611 aaKnown RBP10.85□□□□□ -0.67
SHKBP1-207ENST00000595631 ADARB2-AS1A8MUL3 147 aa10.85□□□□□ -0.67
SHKBP1-207ENST00000595631 ZNF701M0R085 212 aaPredicted RBP10.85□□□□□ -0.67
SHKBP1-207ENST00000595631 SHOXO15266 292 aa10.85□□□□□ -0.67
SHKBP1-207ENST00000595631 SLC25A17O43808 307 aa10.85□□□□□ -0.67
SHKBP1-207ENST00000595631 FCGR3BO75015 233 aa10.85□□□□□ -0.67
SHKBP1-207ENST00000595631 PLGLAQ15195 96 aa10.85□□□□□ -0.67
SHKBP1-207ENST00000595631 RTL8BQ17RB0 113 aa10.85□□□□□ -0.67
SHKBP1-207ENST00000595631 LIN54Q6MZP7 749 aa10.85□□□□□ -0.67
SHKBP1-207ENST00000595631 DHRS11Q6UWP2 260 aa10.85□□□□□ -0.67
SHKBP1-207ENST00000595631 ZNF818PQ6ZRF7 136 aa10.85□□□□□ -0.67
SHKBP1-207ENST00000595631 SGMS2Q8NHU3 365 aa10.85□□□□□ -0.67
SHKBP1-207ENST00000595631 TCTEX1D2Q8WW35 142 aa10.85□□□□□ -0.67
SHKBP1-207ENST00000595631 FCAMRQ8WWV6 532 aa10.85□□□□□ -0.67
SHKBP1-207ENST00000595631 MOB3AQ96BX8 217 aa10.85□□□□□ -0.67
SHKBP1-207ENST00000595631 HARBI1Q96MB7 349 aa10.85□□□□□ -0.67
SHKBP1-207ENST00000595631 TSNAXQ99598 290 aaKnown RBP10.85□□□□□ -0.67
SHKBP1-207ENST00000595631 TINAGL1Q9GZM7 467 aaPredicted RBP10.85□□□□□ -0.67
SHKBP1-207ENST00000595631 PARP11Q9NR21 331 aa10.85□□□□□ -0.67
SHKBP1-207ENST00000595631 MTFP1Q9UDX5 166 aa10.85□□□□□ -0.67
SHKBP1-207ENST00000595631 FBXO7Q9Y3I1 522 aa10.85□□□□□ -0.67
SHKBP1-207ENST00000595631 GABARAPH6UMI1 98 aa10.84□□□□□ -0.67
SHKBP1-207ENST00000595631 AP4M1O00189 453 aa10.84□□□□□ -0.67
SHKBP1-207ENST00000595631 ATP6V0E1O15342 81 aa10.84□□□□□ -0.67
SHKBP1-207ENST00000595631 KCNAB3O43448 404 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms