RNA–Protein interactions for RNA: ENST00000595235.5

SSX4B-201, Transcript of SSX family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4B, Length 1,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-201ENST00000595235 CA2P00918 260 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 IGLV2-23P01705 113 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 TFAP2AP05549 437 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 OR8U9P0C7N5 309 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 OR5H8P0DN80 308 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 MC5RP33032 325 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 SDC2P34741 201 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 TGFBR1P36897 503 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 RANBP1P43487 201 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 SERPINB10P48595 397 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 LUMP51884 338 aaPredicted RBP4.55□□□□□ -1.68
SSX4B-201ENST00000595235 GNB1P62873 340 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 CX3CL1P78423 397 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 SSBP2P81877 361 aaPredicted RBP4.55□□□□□ -1.68
SSX4B-201ENST00000595235 MRPS15P82914 257 aaKnown RBP4.55□□□□□ -1.68
SSX4B-201ENST00000595235 MXD1Q05195 221 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 FHL3Q13643 280 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 ARFRP1Q13795 201 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 PLGLAQ15195 96 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 NEDD8Q15843 81 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 ZNF260Q3ZCT1 412 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 KCTD21Q4G0X4 260 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 SFXN4Q6P4A7 337 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 Q6ZS49 121 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 TPRA1Q86W33 373 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 H1FOOQ8IZA3 346 aaPredicted RBP4.55□□□□□ -1.68
SSX4B-201ENST00000595235 ZNF491Q8N8L2 437 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 MINDY2Q8NBR6 621 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 OR5H6Q8NGV6 325 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 OR8U1Q8NH10 309 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 OR10J5Q8NHC4 309 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 NUDCD2Q8WVJ2 157 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 SLC25A38Q96DW6 304 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 OR5B12Q96R08 314 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 CENPOQ9BU64 300 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 ALX4Q9H161 411 aaPredicted RBP4.55□□□□□ -1.68
SSX4B-201ENST00000595235 GHITMQ9H3K2 345 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.55□□□□□ -1.68
SSX4B-201ENST00000595235 SLC35D1Q9NTN3 355 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 SDHAF2Q9NX18 166 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 METTL1Q9UBP6 276 aaKnown RBP4.55□□□□□ -1.68
SSX4B-201ENST00000595235 RRP15Q9Y3B9 282 aaKnown RBP4.55□□□□□ -1.68
SSX4B-201ENST00000595235 A3GALT2U3KPV4 340 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 DNAH3Q8TD57 4116 aa4.55□□□□□ -1.68
SSX4B-201ENST00000595235 LOC100506127A0A0U1RQW1 187 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 METTL21EPA6NDL7 271 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 TMEM235A6NFC5 223 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 LINC00473A8K010 186 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 J3QRK9 145 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 SLC25A17O43808 307 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 SSX5O60225 188 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 SPDEFO95238 335 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 DIRAS3O95661 229 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 APOA2P02652 100 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 CD36P16671 472 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 DTYMKP23919 212 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 TALDO1P37837 337 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 RAB9AP51151 201 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 RPS16P62249 146 aaKnown RBP4.54□□□□□ -1.68
SSX4B-201ENST00000595235 PJVKQ0ZLH3 352 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 SRSF7Q16629 238 aaKnown RBP eCLIP4.54□□□□□ -1.68
SSX4B-201ENST00000595235 MRGPRG-AS1Q2M3A8 158 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 CDNFQ49AH0 187 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 HACD4Q5VWC8 232 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 ZNF660Q6AZW8 331 aaPredicted RBP4.54□□□□□ -1.68
SSX4B-201ENST00000595235 TMEM65Q6PI78 240 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 UNQ5815/PRO19632Q6UWF5 114 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.54□□□□□ -1.68
SSX4B-201ENST00000595235 BVESQ8NE79 360 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 OR11H1Q8NG94 326 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 OR5M8Q8NGP6 311 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 ABHD5Q8WTS1 349 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 DDB2Q92466 427 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 DPF1Q92782 380 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 FLYWCH2Q96CP2 140 aaKnown RBP4.54□□□□□ -1.68
SSX4B-201ENST00000595235 UBE2E2Q96LR5 201 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 HARBI1Q96MB7 349 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 RNF5Q99942 180 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 GINS4Q9BRT9 223 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 MCRIP2Q9BUT9 160 aaKnown RBP4.54□□□□□ -1.68
SSX4B-201ENST00000595235 ST6GALNAC5Q9BVH7 336 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 GPR61Q9BZJ8 451 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 RHBDL2Q9NX52 303 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 FOXA2Q9Y261 457 aaPredicted RBP4.54□□□□□ -1.68
SSX4B-201ENST00000595235 VSIG4Q9Y279 399 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 NUBP2Q9Y5Y2 271 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 NOTCH3Q9UM47 2321 aa4.54□□□□□ -1.68
SSX4B-201ENST00000595235 IGHV4OR15-8A0A075B7B6 117 aa4.53□□□□□ -1.68
SSX4B-201ENST00000595235 A0A087WW49 117 aa4.53□□□□□ -1.68
SSX4B-201ENST00000595235 IGKV1D-13A0A0B4J2D9 117 aa4.53□□□□□ -1.68
SSX4B-201ENST00000595235 SRRM4A7MD48 611 aaKnown RBP4.53□□□□□ -1.68
SSX4B-201ENST00000595235 SEC14L6B5MCN3 397 aa4.53□□□□□ -1.68
SSX4B-201ENST00000595235 IGLV2-14P01704 120 aa4.53□□□□□ -1.68
SSX4B-201ENST00000595235 CRYGBP07316 175 aa4.53□□□□□ -1.68
SSX4B-201ENST00000595235 IGKV1-13P0DP09 117 aa4.53□□□□□ -1.68
SSX4B-201ENST00000595235 PTHLHP12272 177 aa4.53□□□□□ -1.68
SSX4B-201ENST00000595235 NFYAP23511 347 aaPredicted RBP4.53□□□□□ -1.68
SSX4B-201ENST00000595235 DUTP33316 252 aaKnown RBP4.53□□□□□ -1.68
SSX4B-201ENST00000595235 SLURP1P55000 103 aa4.53□□□□□ -1.68
SSX4B-201ENST00000595235 GNG2P59768 71 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms