RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 IGKV1-16P04430 117 aa9.93□□□□□ -0.82
SNORD55-201ENST00000581525 CRYGBP07316 175 aa9.93□□□□□ -0.82
SNORD55-201ENST00000581525 CSF1P09603 554 aa9.93□□□□□ -0.82
SNORD55-201ENST00000581525 OPN1MW2P0DN77 364 aa9.93□□□□□ -0.82
SNORD55-201ENST00000581525 OPN1MW3P0DN78 364 aa9.93□□□□□ -0.82
SNORD55-201ENST00000581525 IGKV1-13P0DP09 117 aa9.93□□□□□ -0.82
SNORD55-201ENST00000581525 RRASP10301 218 aa9.93□□□□□ -0.82
SNORD55-201ENST00000581525 NFYAP23511 347 aaPredicted RBP9.93□□□□□ -0.82
SNORD55-201ENST00000581525 PRSS3P35030 304 aa9.93□□□□□ -0.82
SNORD55-201ENST00000581525 LUMP51884 338 aaPredicted RBP9.93□□□□□ -0.82
SNORD55-201ENST00000581525 SPCS2Q15005 226 aa9.93□□□□□ -0.82
SNORD55-201ENST00000581525 PSG5Q15238 335 aa9.93□□□□□ -0.82
SNORD55-201ENST00000581525 C19orf54Q5BKX5 351 aa9.93□□□□□ -0.82
SNORD55-201ENST00000581525 TMEM69Q5SWH9 247 aa9.93□□□□□ -0.82
SNORD55-201ENST00000581525 ZNF660Q6AZW8 331 aaPredicted RBP9.93□□□□□ -0.82
SNORD55-201ENST00000581525 LIN54Q6MZP7 749 aa9.93□□□□□ -0.82
SNORD55-201ENST00000581525 OVCH2Q7RTZ1 564 aa9.93□□□□□ -0.82
SNORD55-201ENST00000581525 LYSMD2Q8IV50 215 aa9.93□□□□□ -0.82
SNORD55-201ENST00000581525 C11orf44Q8N8P7 122 aa9.93□□□□□ -0.82
SNORD55-201ENST00000581525 DRAXINQ8NBI3 349 aaPredicted RBP9.93□□□□□ -0.82
SNORD55-201ENST00000581525 DYNC2LI1Q8TCX1 351 aa9.93□□□□□ -0.82
SNORD55-201ENST00000581525 AP3S1Q92572 193 aa9.93□□□□□ -0.82
SNORD55-201ENST00000581525 OR51J1Q9H342 316 aa9.93□□□□□ -0.82
SNORD55-201ENST00000581525 SCPEP1Q9HB40 452 aa9.93□□□□□ -0.82
SNORD55-201ENST00000581525 ZFP57Q9NU63 452 aa9.93□□□□□ -0.82
SNORD55-201ENST00000581525 NECAP2Q9NVZ3 263 aa9.93□□□□□ -0.82
SNORD55-201ENST00000581525 TSSC4Q9Y5U2 329 aaPredicted RBP9.93□□□□□ -0.82
SNORD55-201ENST00000581525 SMIM31A0A1B0GVY4 71 aa9.92□□□□□ -0.82
SNORD55-201ENST00000581525 PSMB11A5LHX3 300 aa9.92□□□□□ -0.82
SNORD55-201ENST00000581525 LINC00473A8K010 186 aa9.92□□□□□ -0.82
SNORD55-201ENST00000581525 FCN1O00602 326 aa9.92□□□□□ -0.82
SNORD55-201ENST00000581525 HPGDSO60760 199 aa9.92□□□□□ -0.82
SNORD55-201ENST00000581525 IGHG4P01861 327 aa9.92□□□□□ -0.82
SNORD55-201ENST00000581525 APOA2P02652 100 aa9.92□□□□□ -0.82
SNORD55-201ENST00000581525 EGR2P11161 476 aaPredicted RBP9.92□□□□□ -0.82
SNORD55-201ENST00000581525 ZNF562Q6V9R5 426 aa9.92□□□□□ -0.82
SNORD55-201ENST00000581525 CLVS1Q8IUQ0 354 aaPredicted RBP9.92□□□□□ -0.82
SNORD55-201ENST00000581525 MINDY2Q8NBR6 621 aa9.92□□□□□ -0.82
SNORD55-201ENST00000581525 WFDC9Q8NEX5 89 aa9.92□□□□□ -0.82
SNORD55-201ENST00000581525 OR4X2Q8NGF9 303 aa9.92□□□□□ -0.82
SNORD55-201ENST00000581525 MYOZ3Q8TDC0 251 aa9.92□□□□□ -0.82
SNORD55-201ENST00000581525 FLYWCH2Q96CP2 140 aaKnown RBP9.92□□□□□ -0.82
SNORD55-201ENST00000581525 TSNAXQ99598 290 aaKnown RBP9.92□□□□□ -0.82
SNORD55-201ENST00000581525 SLC35D1Q9NTN3 355 aa9.92□□□□□ -0.82
SNORD55-201ENST00000581525 RBMX2Q9Y388 322 aaKnown RBP9.92□□□□□ -0.82
SNORD55-201ENST00000581525 NUBP2Q9Y5Y2 271 aa9.92□□□□□ -0.82
SNORD55-201ENST00000581525 TET2Q6N021 2002 aaPredicted RBP9.92□□□□□ -0.82
SNORD55-201ENST00000581525 SRRM4A7MD48 611 aaKnown RBP9.91□□□□□ -0.82
SNORD55-201ENST00000581525 H7C2Y5 167 aa9.91□□□□□ -0.82
SNORD55-201ENST00000581525 ELANEP08246 267 aa9.91□□□□□ -0.82
SNORD55-201ENST00000581525 OR5H8P0DN80 308 aa9.91□□□□□ -0.82
SNORD55-201ENST00000581525 SLC6A1P30531 599 aa9.91□□□□□ -0.82
SNORD55-201ENST00000581525 BRWD1-AS2P59051 145 aa9.91□□□□□ -0.82
SNORD55-201ENST00000581525 SLC35B1P78383 322 aa9.91□□□□□ -0.82
SNORD55-201ENST00000581525 FOXE3Q13461 319 aa9.91□□□□□ -0.82
SNORD55-201ENST00000581525 DYRK1AQ13627 763 aa9.91□□□□□ -0.82
SNORD55-201ENST00000581525 CDK10Q15131 360 aa9.91□□□□□ -0.82
SNORD55-201ENST00000581525 MRGPRG-AS1Q2M3A8 158 aa9.91□□□□□ -0.82
SNORD55-201ENST00000581525 HIST2H2BDQ6DRA6 164 aa9.91□□□□□ -0.82
SNORD55-201ENST00000581525 TEX38Q6PEX7 206 aa9.91□□□□□ -0.82
SNORD55-201ENST00000581525 ZNF329Q86UD4 541 aa9.91□□□□□ -0.82
SNORD55-201ENST00000581525 ZBTB34Q8NCN2 500 aa9.91□□□□□ -0.82
SNORD55-201ENST00000581525 MIXL1Q9H2W2 232 aa9.91□□□□□ -0.82
SNORD55-201ENST00000581525 FBXL15Q9H469 300 aa9.91□□□□□ -0.82
SNORD55-201ENST00000581525 KIAA1456Q9P272 454 aa9.91□□□□□ -0.82
SNORD55-201ENST00000581525 CEPT1Q9Y6K0 416 aa9.91□□□□□ -0.82
SNORD55-201ENST00000581525 TCRBV4S1A1TA0A5B7 111 aa9.9□□□□□ -0.82
SNORD55-201ENST00000581525 PPYP01298 95 aa9.9□□□□□ -0.82
SNORD55-201ENST00000581525 IGLV1-40P01703 118 aa9.9□□□□□ -0.82
SNORD55-201ENST00000581525 PSMB8P28062 276 aa9.9□□□□□ -0.82
SNORD55-201ENST00000581525 FCGR2CP31995 323 aa9.9□□□□□ -0.82
SNORD55-201ENST00000581525 ARPC4P59998 168 aa9.9□□□□□ -0.82
SNORD55-201ENST00000581525 RPS16P62249 146 aaKnown RBP9.9□□□□□ -0.82
SNORD55-201ENST00000581525 CX3CL1P78423 397 aa9.9□□□□□ -0.82
SNORD55-201ENST00000581525 KIAA0141Q14154 515 aaPredicted RBP9.9□□□□□ -0.82
SNORD55-201ENST00000581525 ZNF66Q6ZN08 573 aa9.9□□□□□ -0.82
SNORD55-201ENST00000581525 OR4F17Q8NGA8 305 aa9.9□□□□□ -0.82
SNORD55-201ENST00000581525 OSR1Q8TAX0 266 aaPredicted RBP9.9□□□□□ -0.82
SNORD55-201ENST00000581525 OR4F4Q96R69 305 aa9.9□□□□□ -0.82
SNORD55-201ENST00000581525 HSD17B10Q99714 261 aaKnown RBP9.9□□□□□ -0.82
SNORD55-201ENST00000581525 NXF2Q9GZY0 626 aaKnown RBP9.9□□□□□ -0.82
SNORD55-201ENST00000581525 CCDC59Q9P031 241 aaKnown RBP9.9□□□□□ -0.82
SNORD55-201ENST00000581525 LINC00527Q9UJ94 153 aa9.9□□□□□ -0.82
SNORD55-201ENST00000581525 RBM7Q9Y580 266 aaKnown RBP9.9□□□□□ -0.82
SNORD55-201ENST00000581525 DNAH3Q8TD57 4116 aa9.89□□□□□ -0.83
SNORD55-201ENST00000581525 H3BMQ9 156 aa9.89□□□□□ -0.83
SNORD55-201ENST00000581525 CTDSP2O14595 271 aa9.89□□□□□ -0.83
SNORD55-201ENST00000581525 AADACP22760 399 aa9.89□□□□□ -0.83
SNORD55-201ENST00000581525 CDX1P47902 265 aaPredicted RBP9.89□□□□□ -0.83
SNORD55-201ENST00000581525 RPL23AP62750 156 aaKnown RBP9.89□□□□□ -0.83
SNORD55-201ENST00000581525 RPL30P62888 115 aaKnown RBP9.89□□□□□ -0.83
SNORD55-201ENST00000581525 SSBP2P81877 361 aaPredicted RBP9.89□□□□□ -0.83
SNORD55-201ENST00000581525 NDPQ00604 133 aa9.89□□□□□ -0.83
SNORD55-201ENST00000581525 NSUN5P1Q3KNT7 163 aa9.89□□□□□ -0.83
SNORD55-201ENST00000581525 AKIRIN2Q53H80 203 aa9.89□□□□□ -0.83
SNORD55-201ENST00000581525 PPP1R27Q86WC6 154 aa9.89□□□□□ -0.83
SNORD55-201ENST00000581525 MFSD4AQ8N468 514 aa9.89□□□□□ -0.83
SNORD55-201ENST00000581525 TEX45Q8NA69 505 aa9.89□□□□□ -0.83
SNORD55-201ENST00000581525 BVESQ8NE79 360 aa9.89□□□□□ -0.83
SNORD55-201ENST00000581525 C15orf40Q8WUR7 153 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms