RNA–Protein interactions for RNA: ENST00000578134.5

CDK5RAP3-207, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 831 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-207ENST00000578134 SEC22CQ9BRL7 303 aa13.75□□□□□ -0.21
CDK5RAP3-207ENST00000578134 TMEM56-RWDD3S4R434 201 aa13.75□□□□□ -0.21
CDK5RAP3-207ENST00000578134 CR1P17927 2039 aa13.74□□□□□ -0.21
CDK5RAP3-207ENST00000578134 ABCA2Q9BZC7 2435 aa13.74□□□□□ -0.21
CDK5RAP3-207ENST00000578134 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.74□□□□□ -0.214e-7■■□□□ 13.8
CDK5RAP3-207ENST00000578134 A0A0B4J293 547 aa13.74□□□□□ -0.21
CDK5RAP3-207ENST00000578134 DUXBA0A1W2PPF3 345 aa13.74□□□□□ -0.21
CDK5RAP3-207ENST00000578134 SMAD7O15105 426 aaKnown RBP13.74□□□□□ -0.21
CDK5RAP3-207ENST00000578134 NPFFO15130 113 aa13.74□□□□□ -0.21
CDK5RAP3-207ENST00000578134 CD5LO43866 347 aa13.74□□□□□ -0.21
CDK5RAP3-207ENST00000578134 CDS2O95674 445 aa13.74□□□□□ -0.21
CDK5RAP3-207ENST00000578134 APOA2P02652 100 aa13.74□□□□□ -0.21
CDK5RAP3-207ENST00000578134 OR5AC1P0C628 307 aa13.74□□□□□ -0.21
CDK5RAP3-207ENST00000578134 DLX1P56177 255 aa13.74□□□□□ -0.21
CDK5RAP3-207ENST00000578134 OR5AN1Q8NGI8 311 aa13.74□□□□□ -0.21
CDK5RAP3-207ENST00000578134 OR51H1Q8NH63 302 aa13.74□□□□□ -0.21
CDK5RAP3-207ENST00000578134 CASTOR1Q8WTX7 329 aa13.74□□□□□ -0.21
CDK5RAP3-207ENST00000578134 DDB2Q92466 427 aa13.74□□□□□ -0.21
CDK5RAP3-207ENST00000578134 C18orf12Q96KH6 178 aa13.74□□□□□ -0.21
CDK5RAP3-207ENST00000578134 TP53RKQ96S44 253 aa13.74□□□□□ -0.21
CDK5RAP3-207ENST00000578134 AIFM2Q9BRQ8 373 aa13.74□□□□□ -0.21
CDK5RAP3-207ENST00000578134 CREBBPQ92793 2442 aa13.74□□□□□ -0.21
CDK5RAP3-207ENST00000578134 WNK2Q9Y3S1 2297 aa13.74□□□□□ -0.21
CDK5RAP3-207ENST00000578134 LINC00473A8K010 186 aa13.73□□□□□ -0.21
CDK5RAP3-207ENST00000578134 SSNA1O43805 119 aa13.73□□□□□ -0.21
CDK5RAP3-207ENST00000578134 HPRT1P00492 218 aa13.73□□□□□ -0.21
CDK5RAP3-207ENST00000578134 FOSL1P15407 271 aa13.73□□□□□ -0.21
CDK5RAP3-207ENST00000578134 ZNF16P17020 682 aaPredicted RBP13.73□□□□□ -0.21
CDK5RAP3-207ENST00000578134 RAB13P51153 203 aa13.73□□□□□ -0.21
CDK5RAP3-207ENST00000578134 RPL30P62888 115 aaKnown RBP13.73□□□□□ -0.21
CDK5RAP3-207ENST00000578134 SLC9A3R2Q15599 337 aa13.73□□□□□ -0.21
CDK5RAP3-207ENST00000578134 RTL8BQ17RB0 113 aa13.73□□□□□ -0.21
CDK5RAP3-207ENST00000578134 C1orf229Q6ZS94 237 aaPredicted RBP13.73□□□□□ -0.21
CDK5RAP3-207ENST00000578134 SPAG16Q8N0X2 631 aa13.73□□□□□ -0.21
CDK5RAP3-207ENST00000578134 OR52B4Q8NGK2 314 aa13.73□□□□□ -0.21
CDK5RAP3-207ENST00000578134 NANPQ8TBE9 248 aa13.73□□□□□ -0.21
CDK5RAP3-207ENST00000578134 NABP2Q9BQ15 211 aa13.73□□□□□ -0.21
CDK5RAP3-207ENST00000578134 MED28Q9H204 178 aa13.73□□□□□ -0.21
CDK5RAP3-207ENST00000578134 ZNRD1Q9P1U0 126 aa13.73□□□□□ -0.21
CDK5RAP3-207ENST00000578134 BAHCC1Q9P281 2608 aa13.73□□□□□ -0.21
CDK5RAP3-207ENST00000578134 VPS13CQ709C8 3753 aa13.73□□□□□ -0.21
CDK5RAP3-207ENST00000578134 IGHV1-3A0A0C4DH29 117 aa13.72□□□□□ -0.21
CDK5RAP3-207ENST00000578134 TRAPPC2P0DI81 140 aa13.72□□□□□ -0.21
CDK5RAP3-207ENST00000578134 TRAPPC2BP0DI82 140 aa13.72□□□□□ -0.21
CDK5RAP3-207ENST00000578134 HLA-GP17693 338 aa13.72□□□□□ -0.21
CDK5RAP3-207ENST00000578134 SP6Q3SY56 376 aa13.72□□□□□ -0.21
CDK5RAP3-207ENST00000578134 PDPNQ86YL7 162 aa13.72□□□□□ -0.21
CDK5RAP3-207ENST00000578134 ZNF695Q8IW36 515 aa13.72□□□□□ -0.21
CDK5RAP3-207ENST00000578134 ZNF383Q8NA42 475 aa13.72□□□□□ -0.21
CDK5RAP3-207ENST00000578134 OR4S2Q8NH73 311 aa13.72□□□□□ -0.21
CDK5RAP3-207ENST00000578134 CHAC2Q8WUX2 184 aa13.72□□□□□ -0.21
CDK5RAP3-207ENST00000578134 RNF5Q99942 180 aa13.72□□□□□ -0.21
CDK5RAP3-207ENST00000578134 PLEKHA2Q9HB19 425 aa13.72□□□□□ -0.21
CDK5RAP3-207ENST00000578134 NOTCH2Q04721 2471 aa13.71□□□□□ -0.21
CDK5RAP3-207ENST00000578134 HMX3A6NHT5 357 aa13.71□□□□□ -0.21
CDK5RAP3-207ENST00000578134 DBX1A6NMT0 343 aa13.71□□□□□ -0.21
CDK5RAP3-207ENST00000578134 CD1BP29016 333 aa13.71□□□□□ -0.21
CDK5RAP3-207ENST00000578134 SAA4P35542 130 aa13.71□□□□□ -0.21
CDK5RAP3-207ENST00000578134 RRAS2P62070 204 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-207ENST00000578134 PRB3Q04118 309 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-207ENST00000578134 HABP2Q14520 560 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-207ENST00000578134 ANKRD55Q3KP44 614 aa13.71□□□□□ -0.21
CDK5RAP3-207ENST00000578134 LIN54Q6MZP7 749 aa13.71□□□□□ -0.21
CDK5RAP3-207ENST00000578134 PDZD9Q8IXQ8 264 aa13.71□□□□□ -0.21
CDK5RAP3-207ENST00000578134 CADM3Q8N126 398 aa13.71□□□□□ -0.21
CDK5RAP3-207ENST00000578134 DRAXINQ8NBI3 349 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-207ENST00000578134 RBPMSQ93062 196 aaKnown RBP13.71□□□□□ -0.21
CDK5RAP3-207ENST00000578134 GPHA2Q96T91 129 aa13.71□□□□□ -0.21
CDK5RAP3-207ENST00000578134 MRPL20Q9BYC9 149 aaKnown RBP13.71□□□□□ -0.21
CDK5RAP3-207ENST00000578134 RAB18Q9NP72 206 aa13.71□□□□□ -0.21
CDK5RAP3-207ENST00000578134 SLC35D1Q9NTN3 355 aa13.71□□□□□ -0.21
CDK5RAP3-207ENST00000578134 COMMD9Q9P000 198 aa13.71□□□□□ -0.21
CDK5RAP3-207ENST00000578134 NUP50Q9UKX7 468 aa13.71□□□□□ -0.21
CDK5RAP3-207ENST00000578134 WASHC3Q9Y3C0 194 aa13.71□□□□□ -0.21
CDK5RAP3-207ENST00000578134 TMED3Q9Y3Q3 217 aa13.71□□□□□ -0.21
CDK5RAP3-207ENST00000578134 ITPR3Q14573 2671 aa13.71□□□□□ -0.22
CDK5RAP3-207ENST00000578134 FLNBO75369 2602 aaKnown RBP13.71□□□□□ -0.22
CDK5RAP3-207ENST00000578134 TRAV40A0A0B4J280 105 aa13.7□□□□□ -0.22
CDK5RAP3-207ENST00000578134 H0YJW9 148 aa13.7□□□□□ -0.22
CDK5RAP3-207ENST00000578134 FCGR3BO75015 233 aa13.7□□□□□ -0.22
CDK5RAP3-207ENST00000578134 AVPP01185 164 aa13.7□□□□□ -0.22
CDK5RAP3-207ENST00000578134 IFNA21P01568 189 aa13.7□□□□□ -0.22
CDK5RAP3-207ENST00000578134 BRS3P32247 399 aa13.7□□□□□ -0.22
CDK5RAP3-207ENST00000578134 LPAR6P43657 344 aa13.7□□□□□ -0.22
CDK5RAP3-207ENST00000578134 BCAP31P51572 246 aa13.7□□□□□ -0.22
CDK5RAP3-207ENST00000578134 ZNF585BQ52M93 769 aa13.7□□□□□ -0.22
CDK5RAP3-207ENST00000578134 MOB3BQ86TA1 216 aa13.7□□□□□ -0.22
CDK5RAP3-207ENST00000578134 SELENOHQ8IZQ5 122 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-207ENST00000578134 UXS1Q8NBZ7 420 aa13.7□□□□□ -0.22
CDK5RAP3-207ENST00000578134 OSR1Q8TAX0 266 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-207ENST00000578134 ASB13Q8WXK3 278 aa13.7□□□□□ -0.22
CDK5RAP3-207ENST00000578134 MEGF9Q9H1U4 602 aa13.7□□□□□ -0.22
CDK5RAP3-207ENST00000578134 TMEM160Q9NX00 188 aa13.7□□□□□ -0.22
CDK5RAP3-207ENST00000578134 A0A1B0GVG6 124 aa13.69□□□□□ -0.22
CDK5RAP3-207ENST00000578134 A0A1W2PRD5 423 aa13.69□□□□□ -0.22
CDK5RAP3-207ENST00000578134 A0A1W2PRF3 423 aa13.69□□□□□ -0.22
CDK5RAP3-207ENST00000578134 A0A1W2PRM7 423 aa13.69□□□□□ -0.22
CDK5RAP3-207ENST00000578134 HRASP01112 189 aa13.69□□□□□ -0.22
CDK5RAP3-207ENST00000578134 FSHBP01225 129 aa13.69□□□□□ -0.22
CDK5RAP3-207ENST00000578134 VDAC1P21796 283 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms