RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 SMIM4Q8WVI0 70 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 FLYWCH2Q96CP2 140 aaKnown RBP7.62□□□□□ -1.19
CCDC40-214ENST00000575431 TSNAXQ99598 290 aaKnown RBP7.62□□□□□ -1.19
CCDC40-214ENST00000575431 RASL11BQ9BPW5 248 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 SOSTQ9BQB4 213 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 ZNF702PQ9H963 129 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 KIAA1456Q9P272 454 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 KLK11Q9UBX7 282 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 RBMX2Q9Y388 322 aaKnown RBP7.62□□□□□ -1.19
CCDC40-214ENST00000575431 PRELID3BQ9Y3B1 194 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 NBR2O15453 112 aa7.61□□□□□ -1.19
CCDC40-214ENST00000575431 KCNAB3O43448 404 aa7.61□□□□□ -1.19
CCDC40-214ENST00000575431 GSTZ1O43708 216 aaPredicted RBP7.61□□□□□ -1.19
CCDC40-214ENST00000575431 SPDEFO95238 335 aa7.61□□□□□ -1.19
CCDC40-214ENST00000575431 PMP2P02689 132 aa7.61□□□□□ -1.19
CCDC40-214ENST00000575431 AMY1AP04745 511 aa7.61□□□□□ -1.19
CCDC40-214ENST00000575431 AMY2AP04746 511 aa7.61□□□□□ -1.19
CCDC40-214ENST00000575431 FCER2P06734 321 aa7.61□□□□□ -1.19
CCDC40-214ENST00000575431 S100GP29377 79 aa7.61□□□□□ -1.19
CCDC40-214ENST00000575431 DUTP33316 252 aaKnown RBP7.61□□□□□ -1.19
CCDC40-214ENST00000575431 HRH1P35367 487 aa7.61□□□□□ -1.19
CCDC40-214ENST00000575431 ETV6P41212 452 aa7.61□□□□□ -1.19
CCDC40-214ENST00000575431 CATR1Q13166 79 aa7.61□□□□□ -1.19
CCDC40-214ENST00000575431 MMDQ15546 238 aa7.61□□□□□ -1.19
CCDC40-214ENST00000575431 SPANXN2Q5MJ10 180 aa7.61□□□□□ -1.19
CCDC40-214ENST00000575431 ZNF660Q6AZW8 331 aaPredicted RBP7.61□□□□□ -1.19
CCDC40-214ENST00000575431 GLDNQ6ZMI3 551 aaPredicted RBP7.61□□□□□ -1.19
CCDC40-214ENST00000575431 LINC00299Q6ZSB3 139 aa7.61□□□□□ -1.19
CCDC40-214ENST00000575431 FOXRED2Q8IWF2 684 aa7.61□□□□□ -1.19
CCDC40-214ENST00000575431 CMTM1Q8IZ96 169 aa7.61□□□□□ -1.19
CCDC40-214ENST00000575431 Q8N9W7 124 aa7.61□□□□□ -1.19
CCDC40-214ENST00000575431 ZNF383Q8NA42 475 aa7.61□□□□□ -1.19
CCDC40-214ENST00000575431 DRAXINQ8NBI3 349 aaPredicted RBP7.61□□□□□ -1.19
CCDC40-214ENST00000575431 NPBQ8NG41 125 aa7.61□□□□□ -1.19
CCDC40-214ENST00000575431 SECTM1Q8WVN6 248 aa7.61□□□□□ -1.19
CCDC40-214ENST00000575431 MOB3AQ96BX8 217 aa7.61□□□□□ -1.19
CCDC40-214ENST00000575431 ZNF2Q9BSG1 426 aaPredicted RBP7.61□□□□□ -1.19
CCDC40-214ENST00000575431 GON7Q9BXV9 100 aa7.61□□□□□ -1.19
CCDC40-214ENST00000575431 SLC5A7Q9GZV3 580 aa7.61□□□□□ -1.19
CCDC40-214ENST00000575431 PLSCR3Q9NRY6 295 aa7.61□□□□□ -1.19
CCDC40-214ENST00000575431 SLC35D1Q9NTN3 355 aa7.61□□□□□ -1.19
CCDC40-214ENST00000575431 SVEP1Q4LDE5 3571 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 IGKV1D-13A0A0B4J2D9 117 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 A6NHS1 94 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 J3QRK9 145 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 HAX1O00165 279 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 NDUFA3O95167 84 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 RAB3DO95716 219 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 IGHG2P01859 326 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 CD74P04233 296 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 IGKV1-13P0DP09 117 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 KIR2DS2P43631 304 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 VDAC2P45880 294 aaPredicted RBP7.6□□□□□ -1.19
CCDC40-214ENST00000575431 UCP3P55916 312 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 FXYD4P59646 89 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 RPS16P62249 146 aaKnown RBP7.6□□□□□ -1.19
CCDC40-214ENST00000575431 MEF2DQ14814 521 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 TMEM177Q53S58 311 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 C9orf152Q5JTZ5 239 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 LIN54Q6MZP7 749 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 KCTD9Q7L273 389 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 SLC35E3Q7Z769 313 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 CCDC190Q86UF4 302 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 FAM71E2Q8N5Q1 922 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 OR6Q1Q8NGQ2 317 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 OSR1Q8TAX0 266 aaPredicted RBP7.6□□□□□ -1.19
CCDC40-214ENST00000575431 WFDC12Q8WWY7 111 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 DEDD2Q8WXF8 326 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 DDB2Q92466 427 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 AIFM2Q9BRQ8 373 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 WNT10AQ9GZT5 417 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 CCL28Q9NRJ3 127 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 SERTAD4Q9NUC0 356 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 ZNF580Q9UK33 172 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 ZFHX3Q15911 3703 aa7.6□□□□□ -1.19
CCDC40-214ENST00000575431 AP4M1O00189 453 aa7.59□□□□□ -1.19
CCDC40-214ENST00000575431 RRHO14718 337 aa7.59□□□□□ -1.19
CCDC40-214ENST00000575431 RBFOX2O43251 390 aaKnown RBP eCLIP7.59□□□□□ -1.19
CCDC40-214ENST00000575431 IGLV2-14P01704 120 aa7.59□□□□□ -1.19
CCDC40-214ENST00000575431 HLA-DRB1P01911 266 aa7.59□□□□□ -1.19
CCDC40-214ENST00000575431 CD3DP04234 171 aa7.59□□□□□ -1.19
CCDC40-214ENST00000575431 AKAIN1P0CW23 69 aa7.59□□□□□ -1.19
CCDC40-214ENST00000575431 ECI1P42126 302 aa7.59□□□□□ -1.19
CCDC40-214ENST00000575431 F2RL1P55085 397 aa7.59□□□□□ -1.19
CCDC40-214ENST00000575431 AP3S2P59780 193 aa7.59□□□□□ -1.19
CCDC40-214ENST00000575431 DGCR2P98153 550 aa7.59□□□□□ -1.19
CCDC40-214ENST00000575431 ZNF45Q02386 682 aa7.59□□□□□ -1.19
CCDC40-214ENST00000575431 C5orf64Q2M2E5 130 aa7.59□□□□□ -1.19
CCDC40-214ENST00000575431 RNASE12Q5GAN4 147 aaKnown RBP7.59□□□□□ -1.19
CCDC40-214ENST00000575431 FOXB2Q5VYV0 432 aa7.59□□□□□ -1.19
CCDC40-214ENST00000575431 STEAP1BQ6NZ63 245 aa7.59□□□□□ -1.19
CCDC40-214ENST00000575431 MFSD4AQ8N468 514 aa7.59□□□□□ -1.19
CCDC40-214ENST00000575431 TCTEX1D1Q8N7M0 179 aa7.59□□□□□ -1.19
CCDC40-214ENST00000575431 POC5Q8NA72 575 aa7.59□□□□□ -1.19
CCDC40-214ENST00000575431 BVESQ8NE79 360 aa7.59□□□□□ -1.19
CCDC40-214ENST00000575431 CD300LFQ8TDQ1 290 aa7.59□□□□□ -1.19
CCDC40-214ENST00000575431 CHPT1Q8WUD6 406 aa7.59□□□□□ -1.19
CCDC40-214ENST00000575431 TAF15Q92804 592 aaKnown RBP eCLIP7.59□□□□□ -1.19
CCDC40-214ENST00000575431 ZNF486Q96H40 463 aaPredicted RBP7.59□□□□□ -1.19
CCDC40-214ENST00000575431 THAP7Q9BT49 309 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms