RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 S100ZQ8WXG8 99 aa12.57□□□□□ -0.4
CCNE1-204ENST00000574121 C5orf30Q96GV9 206 aa12.57□□□□□ -0.4
CCNE1-204ENST00000574121 HSD17B10Q99714 261 aaKnown RBP12.57□□□□□ -0.4
CCNE1-204ENST00000574121 RNF5Q99942 180 aa12.57□□□□□ -0.4
CCNE1-204ENST00000574121 SLC25A33Q9BSK2 321 aa12.57□□□□□ -0.4
CCNE1-204ENST00000574121 AKIP1Q9NQ31 210 aa12.57□□□□□ -0.4
CCNE1-204ENST00000574121 MOB4Q9Y3A3 225 aa12.57□□□□□ -0.4
CCNE1-204ENST00000574121 DISC1C4P0D8 188 aa12.56□□□□□ -0.4
CCNE1-204ENST00000574121 FGF16O43320 207 aa12.56□□□□□ -0.4
CCNE1-204ENST00000574121 NDUFA7O95182 113 aa12.56□□□□□ -0.4
CCNE1-204ENST00000574121 HKR1P10072 659 aa12.56□□□□□ -0.4
CCNE1-204ENST00000574121 RRASP10301 218 aa12.56□□□□□ -0.4
CCNE1-204ENST00000574121 FAUP35544 74 aaKnown RBP12.56□□□□□ -0.4
CCNE1-204ENST00000574121 LHFPL1Q86WI0 220 aa12.56□□□□□ -0.4
CCNE1-204ENST00000574121 PDPNQ86YL7 162 aa12.56□□□□□ -0.4
CCNE1-204ENST00000574121 MFSD4AQ8N468 514 aa12.56□□□□□ -0.4
CCNE1-204ENST00000574121 TOMM5Q8N4H5 51 aa12.56□□□□□ -0.4
CCNE1-204ENST00000574121 DRAXINQ8NBI3 349 aaPredicted RBP12.56□□□□□ -0.4
CCNE1-204ENST00000574121 TERB2Q8NHR7 220 aa12.56□□□□□ -0.4
CCNE1-204ENST00000574121 CCL28Q9NRJ3 127 aa12.56□□□□□ -0.4
CCNE1-204ENST00000574121 C1RLQ9NZP8 487 aa12.56□□□□□ -0.4
CCNE1-204ENST00000574121 PRELID3BQ9Y3B1 194 aa12.56□□□□□ -0.4
CCNE1-204ENST00000574121 TSPAN9O75954 239 aa12.55□□□□□ -0.4
CCNE1-204ENST00000574121 AMY2AP04746 511 aa12.55□□□□□ -0.4
CCNE1-204ENST00000574121 GNRHRP30968 328 aa12.55□□□□□ -0.4
CCNE1-204ENST00000574121 ECI1P42126 302 aa12.55□□□□□ -0.4
CCNE1-204ENST00000574121 CBX3Q13185 183 aa12.55□□□□□ -0.4
CCNE1-204ENST00000574121 EIF4EBP1Q13541 118 aaPredicted RBP12.55□□□□□ -0.4
CCNE1-204ENST00000574121 KLF9Q13886 244 aaPredicted RBP12.55□□□□□ -0.4
CCNE1-204ENST00000574121 RTL8BQ17RB0 113 aa12.55□□□□□ -0.4
CCNE1-204ENST00000574121 AADACL3Q5VUY0 350 aa12.55□□□□□ -0.4
CCNE1-204ENST00000574121 TRIQKQ629K1 86 aa12.55□□□□□ -0.4
CCNE1-204ENST00000574121 KCTD9Q7L273 389 aa12.55□□□□□ -0.4
CCNE1-204ENST00000574121 CMTM1Q8IZ96 169 aa12.55□□□□□ -0.4
CCNE1-204ENST00000574121 SLC38A6Q8IZM9 456 aa12.55□□□□□ -0.4
CCNE1-204ENST00000574121 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.55□□□□□ -0.4
CCNE1-204ENST00000574121 BVESQ8NE79 360 aa12.55□□□□□ -0.4
CCNE1-204ENST00000574121 OR4D10Q8NGI6 311 aa12.55□□□□□ -0.4
CCNE1-204ENST00000574121 OR4C16Q8NGL9 310 aa12.55□□□□□ -0.4
CCNE1-204ENST00000574121 OR4C13Q8NGP0 309 aa12.55□□□□□ -0.4
CCNE1-204ENST00000574121 DDB2Q92466 427 aa12.55□□□□□ -0.4
CCNE1-204ENST00000574121 PRRT1Q99946 306 aa12.55□□□□□ -0.4
CCNE1-204ENST00000574121 FXYD6Q9H0Q3 95 aa12.55□□□□□ -0.4
CCNE1-204ENST00000574121 SLC35D1Q9NTN3 355 aa12.55□□□□□ -0.4
CCNE1-204ENST00000574121 SLC2A8Q9NY64 477 aa12.55□□□□□ -0.4
CCNE1-204ENST00000574121 A0A1B0GUS0 222 aa12.54□□□□□ -0.4
CCNE1-204ENST00000574121 H7C2Y5 167 aa12.54□□□□□ -0.4
CCNE1-204ENST00000574121 ZNF735P0CB33 412 aa12.54□□□□□ -0.4
CCNE1-204ENST00000574121 S100GP29377 79 aa12.54□□□□□ -0.4
CCNE1-204ENST00000574121 CATR1Q13166 79 aa12.54□□□□□ -0.4
CCNE1-204ENST00000574121 HNF4GQ14541 408 aa12.54□□□□□ -0.4
CCNE1-204ENST00000574121 FBLN7Q53RD9 439 aa12.54□□□□□ -0.4
CCNE1-204ENST00000574121 GLDNQ6ZMI3 551 aaPredicted RBP12.54□□□□□ -0.4
CCNE1-204ENST00000574121 ZNF818PQ6ZRF7 136 aa12.54□□□□□ -0.4
CCNE1-204ENST00000574121 OR4F5Q8NH21 305 aa12.54□□□□□ -0.4
CCNE1-204ENST00000574121 ZNF486Q96H40 463 aaPredicted RBP12.54□□□□□ -0.4
CCNE1-204ENST00000574121 SDHCQ99643 169 aaPredicted RBP12.54□□□□□ -0.4
CCNE1-204ENST00000574121 CCDC32Q9BV29 185 aa12.54□□□□□ -0.4
CCNE1-204ENST00000574121 C19orf24Q9BVV8 132 aa12.54□□□□□ -0.4
CCNE1-204ENST00000574121 TMEM89A2RUT3 159 aa12.53□□□□□ -0.4
CCNE1-204ENST00000574121 LINC00473A8K010 186 aa12.53□□□□□ -0.4
CCNE1-204ENST00000574121 RNF212BA8MTL3 300 aa12.53□□□□□ -0.4
CCNE1-204ENST00000574121 GPR31O00270 319 aa12.53□□□□□ -0.4
CCNE1-204ENST00000574121 CD40LGP29965 261 aa12.53□□□□□ -0.4
CCNE1-204ENST00000574121 KIR2DS2P43631 304 aa12.53□□□□□ -0.4
CCNE1-204ENST00000574121 INPP1P49441 399 aa12.53□□□□□ -0.4
CCNE1-204ENST00000574121 RAG2P55895 527 aa12.53□□□□□ -0.4
CCNE1-204ENST00000574121 FOXL1Q12952 345 aa12.53□□□□□ -0.4
CCNE1-204ENST00000574121 SURF2Q15527 256 aaPredicted RBP12.53□□□□□ -0.4
CCNE1-204ENST00000574121 MMDQ15546 238 aa12.53□□□□□ -0.4
CCNE1-204ENST00000574121 BAK1Q16611 211 aa12.53□□□□□ -0.4
CCNE1-204ENST00000574121 SCGB2B2Q4G0G5 96 aa12.53□□□□□ -0.4
CCNE1-204ENST00000574121 C11orf88Q6PI97 169 aa12.53□□□□□ -0.4
CCNE1-204ENST00000574121 Q8N2B8 174 aa12.53□□□□□ -0.4
CCNE1-204ENST00000574121 NPBQ8NG41 125 aa12.53□□□□□ -0.4
CCNE1-204ENST00000574121 FLYWCH2Q96CP2 140 aaKnown RBP12.53□□□□□ -0.4
CCNE1-204ENST00000574121 RSRP1Q9BUV0 290 aa12.53□□□□□ -0.4
CCNE1-204ENST00000574121 PRSS22Q9GZN4 317 aa12.53□□□□□ -0.4
CCNE1-204ENST00000574121 C16orf95Q9H693 158 aa12.53□□□□□ -0.4
CCNE1-204ENST00000574121 PLSCR3Q9NRY6 295 aa12.53□□□□□ -0.4
CCNE1-204ENST00000574121 SCP2D1Q9UJQ7 156 aa12.53□□□□□ -0.4
CCNE1-204ENST00000574121 CUBNO60494 3623 aa12.52□□□□□ -0.4
CCNE1-204ENST00000574121 RBFOX2O43251 390 aaKnown RBP eCLIP12.52□□□□□ -0.41
CCNE1-204ENST00000574121 SPDEFO95238 335 aa12.52□□□□□ -0.41
CCNE1-204ENST00000574121 IGKV1-16P04430 117 aa12.52□□□□□ -0.41
CCNE1-204ENST00000574121 LGALS7P47929 136 aa12.52□□□□□ -0.41
CCNE1-204ENST00000574121 PPP5CP53041 499 aa12.52□□□□□ -0.41
CCNE1-204ENST00000574121 LINC00205P59089 165 aa12.52□□□□□ -0.41
CCNE1-204ENST00000574121 RELBQ01201 579 aa12.52□□□□□ -0.41
CCNE1-204ENST00000574121 FAAP20Q6NZ36 180 aa12.52□□□□□ -0.41
CCNE1-204ENST00000574121 Q6ZSV7 163 aa12.52□□□□□ -0.41
CCNE1-204ENST00000574121 FAM71E2Q8N5Q1 922 aa12.52□□□□□ -0.41
CCNE1-204ENST00000574121 C5orf56Q8N8D9 126 aa12.52□□□□□ -0.41
CCNE1-204ENST00000574121 OR51S1Q8NGJ8 323 aa12.52□□□□□ -0.41
CCNE1-204ENST00000574121 ZFAND1Q8TCF1 268 aa12.52□□□□□ -0.41
CCNE1-204ENST00000574121 CD300LFQ8TDQ1 290 aa12.52□□□□□ -0.41
CCNE1-204ENST00000574121 TCTEX1D2Q8WW35 142 aa12.52□□□□□ -0.41
CCNE1-204ENST00000574121 TSNAXQ99598 290 aaKnown RBP12.52□□□□□ -0.41
CCNE1-204ENST00000574121 WDR12Q9GZL7 423 aaKnown RBP12.52□□□□□ -0.41
CCNE1-204ENST00000574121 LIN7CQ9NUP9 197 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms