RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 SLC10A1Q14973 349 aa13.11□□□□□ -0.31
NUP88-207ENST00000573584 LPAL2Q16609 132 aa13.11□□□□□ -0.31
NUP88-207ENST00000573584 SPINK9Q5DT21 86 aa13.11□□□□□ -0.31
NUP88-207ENST00000573584 COA6Q5JTJ3 125 aaKnown RBP13.11□□□□□ -0.31
NUP88-207ENST00000573584 FIP1L1Q6UN15 594 aaKnown RBP13.11□□□□□ -0.31
NUP88-207ENST00000573584 OR2T10Q8NGZ9 312 aa13.11□□□□□ -0.31
NUP88-207ENST00000573584 TMEM37Q8WXS4 190 aa13.11□□□□□ -0.31
NUP88-207ENST00000573584 NINJ1Q92982 152 aa13.11□□□□□ -0.31
NUP88-207ENST00000573584 NEIL1Q96FI4 390 aaPredicted RBP13.11□□□□□ -0.31
NUP88-207ENST00000573584 MRPL37Q9BZE1 423 aaKnown RBP13.11□□□□□ -0.31
NUP88-207ENST00000573584 HBZP02008 142 aa13.11□□□□□ -0.31
NUP88-207ENST00000573584 H2BFWTQ7Z2G1 175 aa13.11□□□□□ -0.31
NUP88-207ENST00000573584 OR5T1Q8NG75 326 aa13.11□□□□□ -0.31
NUP88-207ENST00000573584 CIB3Q96Q77 187 aaPredicted RBP13.11□□□□□ -0.31
NUP88-207ENST00000573584 DEFB127Q9H1M4 99 aa13.11□□□□□ -0.31
NUP88-207ENST00000573584 A0A1B0GV90 55 aa13.1□□□□□ -0.31
NUP88-207ENST00000573584 J3QW42 95 aa13.1□□□□□ -0.31
NUP88-207ENST00000573584 SP1P08047 785 aa13.1□□□□□ -0.31
NUP88-207ENST00000573584 ZNF766Q5HY98 468 aa13.1□□□□□ -0.31
NUP88-207ENST00000573584 CXorf67Q86X51 503 aaPredicted RBP13.1□□□□□ -0.31
NUP88-207ENST00000573584 SLC25A40Q8TBP6 338 aa13.1□□□□□ -0.31
NUP88-207ENST00000573584 TMEM170AQ8WVE7 144 aa13.1□□□□□ -0.31
NUP88-207ENST00000573584 ACY3Q96HD9 319 aa13.1□□□□□ -0.31
NUP88-207ENST00000573584 DDA1Q9BW61 102 aa13.1□□□□□ -0.31
NUP88-207ENST00000573584 FUT9Q9Y231 359 aa13.1□□□□□ -0.31
NUP88-207ENST00000573584 ARHGAP21Q5T5U3 1957 aa13.1□□□□□ -0.31
NUP88-207ENST00000573584 MUC3AQ02505 3323 aa13.1□□□□□ -0.31
NUP88-207ENST00000573584 OOEPA6NGQ2 149 aa13.1□□□□□ -0.31
NUP88-207ENST00000573584 CLDN14O95500 239 aa13.1□□□□□ -0.31
NUP88-207ENST00000573584 NUBP1P53384 320 aa13.1□□□□□ -0.31
NUP88-207ENST00000573584 PSG7Q13046 419 aa13.1□□□□□ -0.31
NUP88-207ENST00000573584 C11orf94C9JXX5 98 aa13.09□□□□□ -0.31
NUP88-207ENST00000573584 WNT9BO14905 357 aa13.09□□□□□ -0.31
NUP88-207ENST00000573584 HOXA4Q00056 320 aaPredicted RBP13.09□□□□□ -0.31
NUP88-207ENST00000573584 MRGPRDQ8TDS7 321 aa13.09□□□□□ -0.31
NUP88-207ENST00000573584 OBP2BQ9NPH6 170 aa13.09□□□□□ -0.31
NUP88-207ENST00000573584 USF3Q68DE3 2245 aa13.09□□□□□ -0.31
NUP88-207ENST00000573584 TRIOBPQ9H2D6 2365 aa13.09□□□□□ -0.31
NUP88-207ENST00000573584 C1QTNF9BB2RNN3 333 aa13.09□□□□□ -0.31
NUP88-207ENST00000573584 C17orf112F2Z3M2 114 aa13.09□□□□□ -0.31
NUP88-207ENST00000573584 KLRC4-KLRK1H3BQV0 150 aa13.09□□□□□ -0.31
NUP88-207ENST00000573584 RAB29O14966 203 aa13.09□□□□□ -0.31
NUP88-207ENST00000573584 VENTXO95231 258 aa13.09□□□□□ -0.31
NUP88-207ENST00000573584 GABRA2P47869 451 aa13.09□□□□□ -0.31
NUP88-207ENST00000573584 LINC00205P59089 165 aa13.09□□□□□ -0.31
NUP88-207ENST00000573584 ZNF826PQ6ZT77 177 aa13.09□□□□□ -0.31
NUP88-207ENST00000573584 KLF13Q9Y2Y9 288 aaPredicted RBP13.09□□□□□ -0.31
NUP88-207ENST00000573584 GGCTO75223 188 aaKnown RBP13.09□□□□□ -0.31
NUP88-207ENST00000573584 NPPCP23582 126 aa13.09□□□□□ -0.31
NUP88-207ENST00000573584 UBE2NP61088 152 aaKnown RBP13.09□□□□□ -0.31
NUP88-207ENST00000573584 VWC2Q2TAL6 325 aa13.09□□□□□ -0.31
NUP88-207ENST00000573584 SLC35E4Q6ICL7 350 aa13.09□□□□□ -0.31
NUP88-207ENST00000573584 CACNA1DQ01668 2161 aa13.09□□□□□ -0.31
NUP88-207ENST00000573584 DOCK11Q5JSL3 2073 aa13.08□□□□□ -0.31
NUP88-207ENST00000573584 TMEM265A0A087WTH1 108 aa13.08□□□□□ -0.32
NUP88-207ENST00000573584 ZNF705GA8MUZ8 300 aaPredicted RBP13.08□□□□□ -0.32
NUP88-207ENST00000573584 SRP14P37108 136 aaKnown RBP13.08□□□□□ -0.32
NUP88-207ENST00000573584 CDC34P49427 236 aaPredicted RBP13.08□□□□□ -0.32
NUP88-207ENST00000573584 PDLIM4P50479 330 aa13.08□□□□□ -0.32
NUP88-207ENST00000573584 GABRA6Q16445 453 aa13.08□□□□□ -0.32
NUP88-207ENST00000573584 ACTL10Q5JWF8 245 aa13.08□□□□□ -0.32
NUP88-207ENST00000573584 HES4Q9HCC6 221 aa13.08□□□□□ -0.32
NUP88-207ENST00000573584 TMEM210A6NLX4 147 aa13.08□□□□□ -0.32
NUP88-207ENST00000573584 IQCF6A8MYZ5 107 aa13.08□□□□□ -0.32
NUP88-207ENST00000573584 MKRN2OSH3BPM6 223 aa13.08□□□□□ -0.32
NUP88-207ENST00000573584 TFF1P04155 84 aa13.08□□□□□ -0.32
NUP88-207ENST00000573584 PAX1P15863 534 aa13.08□□□□□ -0.32
NUP88-207ENST00000573584 CHRNA7P36544 502 aa13.08□□□□□ -0.32
NUP88-207ENST00000573584 GNB2P62879 340 aa13.08□□□□□ -0.32
NUP88-207ENST00000573584 ACOT6Q3I5F7 207 aaPredicted RBP13.08□□□□□ -0.32
NUP88-207ENST00000573584 ZNF664Q8N3J9 261 aa13.08□□□□□ -0.32
NUP88-207ENST00000573584 OR6C3Q9NZP0 311 aa13.08□□□□□ -0.32
NUP88-207ENST00000573584 SSTP61278 116 aa13.07□□□□□ -0.32
NUP88-207ENST00000573584 KCNIP4Q6PIL6 250 aa13.07□□□□□ -0.32
NUP88-207ENST00000573584 CISD2Q8N5K1 135 aaKnown RBP13.07□□□□□ -0.32
NUP88-207ENST00000573584 COQ2Q96H96 371 aa13.07□□□□□ -0.32
NUP88-207ENST00000573584 GTF3C1Q12789 2109 aa13.07□□□□□ -0.32
NUP88-207ENST00000573584 LINC00473A8K010 186 aa13.07□□□□□ -0.32
NUP88-207ENST00000573584 CRYAAP02489 173 aa13.07□□□□□ -0.32
NUP88-207ENST00000573584 Q6ZR03 302 aa13.07□□□□□ -0.32
NUP88-207ENST00000573584 TAAR6Q96RI8 345 aa13.07□□□□□ -0.32
NUP88-207ENST00000573584 AURKAIP1Q9NWT8 199 aaPredicted RBP13.07□□□□□ -0.32
NUP88-207ENST00000573584 IGHV3-43A0A0B4J1X8 118 aa13.06□□□□□ -0.32
NUP88-207ENST00000573584 A8MWP6 167 aa13.06□□□□□ -0.32
NUP88-207ENST00000573584 C21orf140B9A014 251 aa13.06□□□□□ -0.32
NUP88-207ENST00000573584 GCGP01275 180 aa13.06□□□□□ -0.32
NUP88-207ENST00000573584 TYMSP04818 313 aa13.06□□□□□ -0.32
NUP88-207ENST00000573584 RNF224P0DH78 156 aa13.06□□□□□ -0.32
NUP88-207ENST00000573584 IGHV3-43DP0DP04 118 aa13.06□□□□□ -0.32
NUP88-207ENST00000573584 EGR1P18146 543 aa13.06□□□□□ -0.32
NUP88-207ENST00000573584 BMP5P22003 454 aa13.06□□□□□ -0.32
NUP88-207ENST00000573584 SSTR5P35346 364 aa13.06□□□□□ -0.32
NUP88-207ENST00000573584 MPV17P39210 176 aa13.06□□□□□ -0.32
NUP88-207ENST00000573584 MPLP40238 635 aa13.06□□□□□ -0.32
NUP88-207ENST00000573584 UBE2G2P60604 165 aa13.06□□□□□ -0.32
NUP88-207ENST00000573584 PRSS8Q16651 343 aa13.06□□□□□ -0.32
NUP88-207ENST00000573584 TCTEX1D1Q8N7M0 179 aa13.06□□□□□ -0.32
NUP88-207ENST00000573584 TPRX1Q8N7U7 411 aa13.06□□□□□ -0.32
NUP88-207ENST00000573584 RFESDQ8TAC1 157 aa13.06□□□□□ -0.32
NUP88-207ENST00000573584 KLF14Q8TD94 323 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms