RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 DCTN2Q13561 401 aaKnown RBP13.94□□□□□ -0.18
CHD3-214ENST00000572579 PLGLAQ15195 96 aa13.94□□□□□ -0.18
CHD3-214ENST00000572579 ACTBL2Q562R1 376 aa13.94□□□□□ -0.18
CHD3-214ENST00000572579 UNQ5815/PRO19632Q6UWF5 114 aa13.94□□□□□ -0.18
CHD3-214ENST00000572579 OR56B1Q8NGI3 324 aa13.94□□□□□ -0.18
CHD3-214ENST00000572579 SDHAF2Q9NX18 166 aa13.94□□□□□ -0.18
CHD3-214ENST00000572579 ELF5Q9UKW6 265 aaPredicted RBP13.94□□□□□ -0.18
CHD3-214ENST00000572579 MGAT4AQ9UM21 535 aa13.94□□□□□ -0.18
CHD3-214ENST00000572579 U3KQK5 164 aa13.94□□□□□ -0.18
CHD3-214ENST00000572579 DYNC2H1Q8NCM8 4307 aaKnown RBP13.93□□□□□ -0.18
CHD3-214ENST00000572579 SORL1Q92673 2214 aa13.93□□□□□ -0.18
CHD3-214ENST00000572579 IFITM5A6NNB3 132 aa13.93□□□□□ -0.18
CHD3-214ENST00000572579 LINC01619G3V211 115 aa13.93□□□□□ -0.18
CHD3-214ENST00000572579 M0R1X1 148 aa13.93□□□□□ -0.18
CHD3-214ENST00000572579 MFNGO00587 321 aa13.93□□□□□ -0.18
CHD3-214ENST00000572579 FABP7O15540 132 aa13.93□□□□□ -0.18
CHD3-214ENST00000572579 SLC25A17O43808 307 aa13.93□□□□□ -0.18
CHD3-214ENST00000572579 TFAP2AP05549 437 aa13.93□□□□□ -0.18
CHD3-214ENST00000572579 FCGR3AP08637 254 aa13.93□□□□□ -0.18
CHD3-214ENST00000572579 OR8U9P0C7N5 309 aa13.93□□□□□ -0.18
CHD3-214ENST00000572579 SPNP16150 400 aa13.93□□□□□ -0.18
CHD3-214ENST00000572579 INSL3P51460 131 aa13.93□□□□□ -0.18
CHD3-214ENST00000572579 TBCEQ15813 527 aaPredicted RBP13.93□□□□□ -0.18
CHD3-214ENST00000572579 ZNF429Q86V71 674 aa13.93□□□□□ -0.18
CHD3-214ENST00000572579 TCTEX1D1Q8N7M0 179 aa13.93□□□□□ -0.18
CHD3-214ENST00000572579 ABHD5Q8WTS1 349 aa13.93□□□□□ -0.18
CHD3-214ENST00000572579 ARPC1AQ92747 370 aa13.93□□□□□ -0.18
CHD3-214ENST00000572579 CABLES2Q9BTV7 478 aa13.93□□□□□ -0.18
CHD3-214ENST00000572579 ZNF221Q9UK13 617 aa13.93□□□□□ -0.18
CHD3-214ENST00000572579 TRBV6-7A0A0A0MS04 114 aa13.92□□□□□ -0.18
CHD3-214ENST00000572579 TRAV1-2A0A0B4J238 106 aa13.92□□□□□ -0.18
CHD3-214ENST00000572579 TMEM267Q0VDI3 215 aaPredicted RBP13.92□□□□□ -0.18
CHD3-214ENST00000572579 FXYD3Q14802 87 aa13.92□□□□□ -0.18
CHD3-214ENST00000572579 ACSM6Q6P461 480 aa13.92□□□□□ -0.18
CHD3-214ENST00000572579 IZUMO2Q6UXV1 221 aa13.92□□□□□ -0.18
CHD3-214ENST00000572579 PDPNQ86YL7 162 aa13.92□□□□□ -0.18
CHD3-214ENST00000572579 SBSPONQ8IVN8 264 aa13.92□□□□□ -0.18
CHD3-214ENST00000572579 OR4A4PQ8NGN8 299 aa13.92□□□□□ -0.18
CHD3-214ENST00000572579 OR10R2Q8NGX6 335 aa13.92□□□□□ -0.18
CHD3-214ENST00000572579 RAB3CQ96E17 227 aa13.92□□□□□ -0.18
CHD3-214ENST00000572579 CNBD2Q96M20 576 aa13.92□□□□□ -0.18
CHD3-214ENST00000572579 BET1O15155 118 aa13.91□□□□□ -0.18
CHD3-214ENST00000572579 SAP30O75446 220 aa13.91□□□□□ -0.18
CHD3-214ENST00000572579 RBMXL2O75526 392 aaKnown RBP13.91□□□□□ -0.18
CHD3-214ENST00000572579 HSPB1P04792 205 aaKnown RBP13.91□□□□□ -0.18
CHD3-214ENST00000572579 ZNF367Q7RTV3 350 aa13.91□□□□□ -0.18
CHD3-214ENST00000572579 HAPLN4Q86UW8 402 aa13.91□□□□□ -0.18
CHD3-214ENST00000572579 OR5T1Q8NG75 326 aa13.91□□□□□ -0.18
CHD3-214ENST00000572579 GRPEL2Q8TAA5 225 aa13.91□□□□□ -0.18
CHD3-214ENST00000572579 FLYWCH2Q96CP2 140 aaKnown RBP13.91□□□□□ -0.18
CHD3-214ENST00000572579 TSNAXQ99598 290 aaKnown RBP13.91□□□□□ -0.18
CHD3-214ENST00000572579 SLC35D1Q9NTN3 355 aa13.91□□□□□ -0.18
CHD3-214ENST00000572579 NDUFB11Q9NX14 153 aa13.91□□□□□ -0.18
CHD3-214ENST00000572579 SACSQ9NZJ4 4579 aa13.9□□□□□ -0.18
CHD3-214ENST00000572579 TRDV1A0A1B0GX56 115 aa13.9□□□□□ -0.18
CHD3-214ENST00000572579 SPDEFO95238 335 aa13.9□□□□□ -0.18
CHD3-214ENST00000572579 LY86O95711 162 aa13.9□□□□□ -0.18
CHD3-214ENST00000572579 HIST1H1DP16402 221 aaKnown RBP13.9□□□□□ -0.18
CHD3-214ENST00000572579 PSMD7P51665 324 aa13.9□□□□□ -0.18
CHD3-214ENST00000572579 TPPP2P59282 170 aa13.9□□□□□ -0.18
CHD3-214ENST00000572579 DEFA5Q01523 94 aa13.9□□□□□ -0.18
CHD3-214ENST00000572579 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.9□□□□□ -0.18
CHD3-214ENST00000572579 OR2D2Q9H210 308 aa13.9□□□□□ -0.18
CHD3-214ENST00000572579 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.9□□□□□ -0.18
CHD3-214ENST00000572579 RYR2Q92736 4967 aa13.9□□□□□ -0.18
CHD3-214ENST00000572579 A0A075B6Q4 140 aa13.89□□□□□ -0.19
CHD3-214ENST00000572579 SMIM30A4D0T7 59 aa13.89□□□□□ -0.19
CHD3-214ENST00000572579 TRIM64CA6NLI5 447 aa13.89□□□□□ -0.19
CHD3-214ENST00000572579 SERPINB10P48595 397 aa13.89□□□□□ -0.19
CHD3-214ENST00000572579 PYHIN1Q6K0P9 492 aa13.89□□□□□ -0.19
CHD3-214ENST00000572579 IL34Q6ZMJ4 242 aa13.89□□□□□ -0.19
CHD3-214ENST00000572579 OVCH2Q7RTZ1 564 aa13.89□□□□□ -0.19
CHD3-214ENST00000572579 DDB2Q92466 427 aa13.89□□□□□ -0.19
CHD3-214ENST00000572579 SMAD5-AS1Q9Y6J3 95 aa13.89□□□□□ -0.19
CHD3-214ENST00000572579 TRGV3P03979 118 aa13.88□□□□□ -0.19
CHD3-214ENST00000572579 GP9P14770 177 aa13.88□□□□□ -0.19
CHD3-214ENST00000572579 RAB6AP20340 208 aa13.88□□□□□ -0.19
CHD3-214ENST00000572579 C22orf42Q6IC83 251 aa13.88□□□□□ -0.19
CHD3-214ENST00000572579 H1FOOQ8IZA3 346 aaPredicted RBP13.88□□□□□ -0.19
CHD3-214ENST00000572579 BVESQ8NE79 360 aa13.88□□□□□ -0.19
CHD3-214ENST00000572579 OR10J5Q8NHC4 309 aa13.88□□□□□ -0.19
CHD3-214ENST00000572579 ADAM30Q9UKF2 790 aa13.88□□□□□ -0.19
CHD3-214ENST00000572579 LINC00473A8K010 186 aa13.87□□□□□ -0.19
CHD3-214ENST00000572579 PDCD5O14737 125 aa13.87□□□□□ -0.19
CHD3-214ENST00000572579 APOA2P02652 100 aa13.87□□□□□ -0.19
CHD3-214ENST00000572579 LGALS7P47929 136 aa13.87□□□□□ -0.19
CHD3-214ENST00000572579 TMEM177Q53S58 311 aa13.87□□□□□ -0.19
CHD3-214ENST00000572579 Q8N1Y9 231 aa13.87□□□□□ -0.19
CHD3-214ENST00000572579 POC5Q8NA72 575 aa13.87□□□□□ -0.19
CHD3-214ENST00000572579 SLA2Q9H6Q3 261 aa13.87□□□□□ -0.19
CHD3-214ENST00000572579 DIRAS3O95661 229 aa13.86□□□□□ -0.19
CHD3-214ENST00000572579 TRBV12-3P01733 135 aa13.86□□□□□ -0.19
CHD3-214ENST00000572579 FRMD6-AS1P0C7T7 363 aa13.86□□□□□ -0.19
CHD3-214ENST00000572579 RAB3BP20337 219 aa13.86□□□□□ -0.19
CHD3-214ENST00000572579 DUTP33316 252 aaKnown RBP13.86□□□□□ -0.19
CHD3-214ENST00000572579 SRSF7Q16629 238 aaKnown RBP eCLIP13.86□□□□□ -0.19
CHD3-214ENST00000572579 Q6ZS49 121 aa13.86□□□□□ -0.19
CHD3-214ENST00000572579 ANKRD34BA5PLL1 514 aa13.85□□□□□ -0.19
CHD3-214ENST00000572579 CNIH1O95406 144 aa13.85□□□□□ -0.19
CHD3-214ENST00000572579 IGLV2-14P01704 120 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms