RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 SLC37A2Q8TED4 501 aa6.14□□□□□ -1.43
CNOT1-216ENST00000569240 SARAFQ96BY9 339 aa6.14□□□□□ -1.43
CNOT1-216ENST00000569240 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.14□□□□□ -1.43
CNOT1-216ENST00000569240 MSGN1A6NI15 193 aa6.14□□□□□ -1.43
CNOT1-216ENST00000569240 MDKP21741 143 aaPredicted RBP6.14□□□□□ -1.43
CNOT1-216ENST00000569240 CENPWQ5EE01 88 aa6.14□□□□□ -1.43
CNOT1-216ENST00000569240 SNHG12Q9BXW3 62 aa6.14□□□□□ -1.43
CNOT1-216ENST00000569240 TRBV20-1A0A075B6N2 111 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 GRIFINA4D1Z8 144 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 ZNF146Q15072 292 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 TPTE2P1Q5T6R2 138 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 LINC01590Q5TEZ4 76 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 TSPO2Q5TGU0 170 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 MRPL43Q8N983 215 aaKnown RBP6.13□□□□□ -1.43
CNOT1-216ENST00000569240 ZNF296Q8WUU4 475 aaPredicted RBP6.13□□□□□ -1.43
CNOT1-216ENST00000569240 MED19A0JLT2 244 aaPredicted RBP6.13□□□□□ -1.43
CNOT1-216ENST00000569240 CFIP05156 583 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 CEACAM5P06731 702 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 RPL31P62899 125 aaKnown RBP6.13□□□□□ -1.43
CNOT1-216ENST00000569240 MMDQ15546 238 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 MOGAT3Q86VF5 341 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 SFTPA2Q8IWL1 248 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 SFTPA1Q8IWL2 248 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 STPG3Q8N7X2 389 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 RAB1BQ9H0U4 201 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 LHX9Q9NQ69 397 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 TUBGCP6Q96RT7 1819 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 SRFP11831 508 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 ID3Q02535 119 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 OR5P3Q8WZ94 311 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 TBC1D29Q9UFV1 150 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 TRAV8-4A0A0B4J246 113 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 TMEM8BA6NDV4 472 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 HBDP02042 147 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 SNRPCP09234 159 aaKnown RBP6.13□□□□□ -1.43
CNOT1-216ENST00000569240 CD27P26842 260 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 DEFB115Q30KQ5 88 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 SLC23A3Q6PIS1 610 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 SPRED2Q7Z698 418 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 DLX4Q92988 240 aaPredicted RBP6.13□□□□□ -1.43
CNOT1-216ENST00000569240 RASL11BQ9BPW5 248 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 DLEC1Q9Y238 1755 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 NHSQ6T4R5 1651 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 WNK3Q9BYP7 1800 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 CEACAM18A8MTB9 384 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 GDF9O60383 454 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 PSG6Q00889 435 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 CD300EQ496F6 205 aaPredicted RBP6.13□□□□□ -1.43
CNOT1-216ENST00000569240 TMEM177Q53S58 311 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 FBXO46Q6PJ61 603 aaPredicted RBP6.13□□□□□ -1.43
CNOT1-216ENST00000569240 ASCL5Q7RTU5 278 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 ZNF525Q8N782 197 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 SEPSECSQ9HD40 501 aaKnown RBP6.13□□□□□ -1.43
CNOT1-216ENST00000569240 DNAL4O96015 105 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 ZNF32P17041 273 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 IGFBP3P17936 291 aaPredicted RBP6.13□□□□□ -1.43
CNOT1-216ENST00000569240 ORMDL3Q8N138 153 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 NPCDR1Q9BY65 106 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 C11orf68Q9H3H3 251 aaKnown RBP6.13□□□□□ -1.43
CNOT1-216ENST00000569240 ATAD5Q96QE3 1844 aa6.13□□□□□ -1.43
CNOT1-216ENST00000569240 TRAV8-2A0A0B4J237 113 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 RIPPLY3P57055 190 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 VN1R4Q7Z5H5 301 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 C18orf12Q96KH6 178 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 NEU1Q99519 415 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 SH3BGRL3Q9H299 93 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 RPP21Q9H633 154 aaKnown RBP6.12□□□□□ -1.43
CNOT1-216ENST00000569240 C1RLQ9NZP8 487 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 SIVA1O15304 175 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 TAL2Q16559 108 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 CEACAM21Q3KPI0 293 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 CXorf66Q5JRM2 361 aaPredicted RBP6.12□□□□□ -1.43
CNOT1-216ENST00000569240 TEX38Q6PEX7 206 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 ARL14EPLP0DKL9 152 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 NUP98P52948 1817 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 B4GALT1P15291 398 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 APOBEC4Q8WW27 367 aaKnown RBP6.12□□□□□ -1.43
CNOT1-216ENST00000569240 SSMEM1Q8WWF3 244 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 WNT2BQ93097 391 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 CITED2Q99967 270 aaPredicted RBP6.12□□□□□ -1.43
CNOT1-216ENST00000569240 J3QRE1 110 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 IFNL4K9M1U5 179 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 HOXA3O43365 443 aaPredicted RBP6.12□□□□□ -1.43
CNOT1-216ENST00000569240 NDUFB3O43676 98 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 FGFRL1Q8N441 504 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 GEMIN7Q9H840 131 aaKnown RBP6.12□□□□□ -1.43
CNOT1-216ENST00000569240 SEMA5BQ9P283 1151 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 SHISA3A0PJX4 238 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 K7ESF4 209 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 TMPRSS2O15393 492 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 LHX2P50458 406 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 ZXDCQ2QGD7 858 aaPredicted RBP6.12□□□□□ -1.43
CNOT1-216ENST00000569240 RTBDNQ9BSG5 229 aaPredicted RBP6.12□□□□□ -1.43
CNOT1-216ENST00000569240 EREGO14944 169 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 DPM2O94777 84 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 EIF4EBP2Q13542 120 aaPredicted RBP6.12□□□□□ -1.43
CNOT1-216ENST00000569240 NRN1LQ496H8 165 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 OR1K1Q8NGR3 316 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 WFDC5Q8TCV5 224 aa6.12□□□□□ -1.43
CNOT1-216ENST00000569240 GPR82Q96P67 336 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms