RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 CBX3Q13185 183 aa20.77■□□□□ 0.92
NME3-209ENST00000566600 MMDQ15546 238 aa20.77■□□□□ 0.92
NME3-209ENST00000566600 MSMO1Q15800 293 aa20.77■□□□□ 0.92
NME3-209ENST00000566600 ACTBL2Q562R1 376 aa20.77■□□□□ 0.92
NME3-209ENST00000566600 Q6ZS46 218 aa20.77■□□□□ 0.92
NME3-209ENST00000566600 PDPNQ86YL7 162 aa20.77■□□□□ 0.92
NME3-209ENST00000566600 Q8N9W7 124 aa20.77■□□□□ 0.92
NME3-209ENST00000566600 MTFP1Q9UDX5 166 aa20.77■□□□□ 0.92
NME3-209ENST00000566600 CTDSPLO15194 276 aa20.76■□□□□ 0.91
NME3-209ENST00000566600 F2RL1P55085 397 aa20.76■□□□□ 0.91
NME3-209ENST00000566600 RNASE12Q5GAN4 147 aaKnown RBP20.76■□□□□ 0.91
NME3-209ENST00000566600 BORCS5Q969J3 196 aa20.76■□□□□ 0.91
NME3-209ENST00000566600 C5orf30Q96GV9 206 aa20.76■□□□□ 0.91
NME3-209ENST00000566600 SLC35D1Q9NTN3 355 aa20.76■□□□□ 0.91
NME3-209ENST00000566600 KIAA1456Q9P272 454 aa20.76■□□□□ 0.91
NME3-209ENST00000566600 RBMX2Q9Y388 322 aaKnown RBP20.76■□□□□ 0.91
NME3-209ENST00000566600 NBR2O15453 112 aa20.75■□□□□ 0.91
NME3-209ENST00000566600 RRASP10301 218 aa20.75■□□□□ 0.91
NME3-209ENST00000566600 TBPP20226 339 aa20.75■□□□□ 0.91
NME3-209ENST00000566600 DUTP33316 252 aaKnown RBP20.75■□□□□ 0.91
NME3-209ENST00000566600 RTL8BQ17RB0 113 aa20.75■□□□□ 0.91
NME3-209ENST00000566600 FAM71E2Q8N5Q1 922 aa20.75■□□□□ 0.91
NME3-209ENST00000566600 NPBQ8NG41 125 aa20.75■□□□□ 0.91
NME3-209ENST00000566600 OR6F1Q8NGZ6 308 aa20.75■□□□□ 0.91
NME3-209ENST00000566600 SECTM1Q8WVN6 248 aa20.75■□□□□ 0.91
NME3-209ENST00000566600 KLK11Q9UBX7 282 aa20.75■□□□□ 0.91
NME3-209ENST00000566600 FABP12A6NFH5 140 aa20.74■□□□□ 0.91
NME3-209ENST00000566600 SH2D7A6NKC9 451 aaPredicted RBP20.74■□□□□ 0.91
NME3-209ENST00000566600 TSPAN5P62079 268 aa20.74■□□□□ 0.91
NME3-209ENST00000566600 KLHDC1Q8N7A1 406 aa20.74■□□□□ 0.91
NME3-209ENST00000566600 ZBTB34Q8NCN2 500 aa20.74■□□□□ 0.91
NME3-209ENST00000566600 SMIM4Q8WVI0 70 aa20.74■□□□□ 0.91
NME3-209ENST00000566600 FLYWCH2Q96CP2 140 aaKnown RBP20.74■□□□□ 0.91
NME3-209ENST00000566600 RITA1Q96K30 269 aa20.74■□□□□ 0.91
NME3-209ENST00000566600 HSD17B10Q99714 261 aaKnown RBP20.74■□□□□ 0.91
NME3-209ENST00000566600 ZNF2Q9BSG1 426 aaPredicted RBP20.74■□□□□ 0.91
NME3-209ENST00000566600 SLC5A7Q9GZV3 580 aa20.74■□□□□ 0.91
NME3-209ENST00000566600 ZNF107Q9UII5 783 aaPredicted RBP20.74■□□□□ 0.91
NME3-209ENST00000566600 VSIG10L2P0DP72 767 aa20.73■□□□□ 0.91
NME3-209ENST00000566600 LINC00205P59089 165 aa20.73■□□□□ 0.91
NME3-209ENST00000566600 FXYD4P59646 89 aa20.73■□□□□ 0.91
NME3-209ENST00000566600 DGCR2P98153 550 aa20.73■□□□□ 0.91
NME3-209ENST00000566600 ZNF660Q6AZW8 331 aaPredicted RBP20.73■□□□□ 0.91
NME3-209ENST00000566600 TSNAXQ99598 290 aaKnown RBP20.73■□□□□ 0.91
NME3-209ENST00000566600 PRELID3BQ9Y3B1 194 aa20.73■□□□□ 0.91
NME3-209ENST00000566600 KCNAB3O43448 404 aa20.72■□□□□ 0.91
NME3-209ENST00000566600 IGLV2-14P01704 120 aa20.72■□□□□ 0.91
NME3-209ENST00000566600 IGHG2P01859 326 aa20.72■□□□□ 0.91
NME3-209ENST00000566600 RPS16P62249 146 aaKnown RBP20.72■□□□□ 0.91
NME3-209ENST00000566600 VAX1Q5SQQ9 334 aa20.72■□□□□ 0.91
NME3-209ENST00000566600 SLC35E3Q7Z769 313 aa20.72■□□□□ 0.91
NME3-209ENST00000566600 MOB3AQ96BX8 217 aa20.72■□□□□ 0.91
NME3-209ENST00000566600 RBMXL1Q96E39 390 aaKnown RBP20.72■□□□□ 0.91
NME3-209ENST00000566600 SOSTQ9BQB4 213 aa20.72■□□□□ 0.91
NME3-209ENST00000566600 WNT10AQ9GZT5 417 aa20.72■□□□□ 0.91
NME3-209ENST00000566600 ANK2Q01484 3957 aa20.71■□□□□ 0.91
NME3-209ENST00000566600 NDUFA3O95167 84 aa20.71■□□□□ 0.91
NME3-209ENST00000566600 IGKV1-16P04430 117 aa20.71■□□□□ 0.91
NME3-209ENST00000566600 TMEM95Q3KNT9 176 aa20.71■□□□□ 0.91
NME3-209ENST00000566600 RNASE10Q5GAN6 216 aaKnown RBP20.71■□□□□ 0.91
NME3-209ENST00000566600 ZNF66Q6ZN08 573 aa20.71■□□□□ 0.91
NME3-209ENST00000566600 KCTD9Q7L273 389 aa20.71■□□□□ 0.91
NME3-209ENST00000566600 TMEM17Q86X19 198 aa20.71■□□□□ 0.91
NME3-209ENST00000566600 FOXRED2Q8IWF2 684 aa20.71■□□□□ 0.91
NME3-209ENST00000566600 TMEM229BQ8NBD8 167 aa20.71■□□□□ 0.91
NME3-209ENST00000566600 BVESQ8NE79 360 aa20.71■□□□□ 0.91
NME3-209ENST00000566600 DDB2Q92466 427 aa20.71■□□□□ 0.91
NME3-209ENST00000566600 CITED1Q99966 193 aa20.71■□□□□ 0.91
NME3-209ENST00000566600 CCL28Q9NRJ3 127 aa20.71■□□□□ 0.91
NME3-209ENST00000566600 LINC00473A8K010 186 aa20.7■□□□□ 0.9
NME3-209ENST00000566600 RRHO14718 337 aa20.7■□□□□ 0.9
NME3-209ENST00000566600 GSTZ1O43708 216 aaPredicted RBP20.7■□□□□ 0.9
NME3-209ENST00000566600 SPDEFO95238 335 aa20.7■□□□□ 0.9
NME3-209ENST00000566600 IFNA6P05013 189 aa20.7■□□□□ 0.9
NME3-209ENST00000566600 CNTFRP26992 372 aa20.7■□□□□ 0.9
NME3-209ENST00000566600 LGALS7P47929 136 aa20.7■□□□□ 0.9
NME3-209ENST00000566600 TAS2R19P59542 299 aa20.7■□□□□ 0.9
NME3-209ENST00000566600 C5orf64Q2M2E5 130 aa20.7■□□□□ 0.9
NME3-209ENST00000566600 FOXB2Q5VYV0 432 aa20.7■□□□□ 0.9
NME3-209ENST00000566600 TAS2R8Q9NYW2 309 aa20.7■□□□□ 0.9
NME3-209ENST00000566600 HLA-DRB1P01911 266 aa20.69■□□□□ 0.9
NME3-209ENST00000566600 CSF1P09603 554 aa20.69■□□□□ 0.9
NME3-209ENST00000566600 KRTAP10-3P60369 221 aa20.69■□□□□ 0.9
NME3-209ENST00000566600 TMEM177Q53S58 311 aa20.69■□□□□ 0.9
NME3-209ENST00000566600 LIN54Q6MZP7 749 aa20.69■□□□□ 0.9
NME3-209ENST00000566600 CENPVQ7Z7K6 275 aaPredicted RBP20.69■□□□□ 0.9
NME3-209ENST00000566600 M0QYG6 137 aa20.68■□□□□ 0.9
NME3-209ENST00000566600 CD3DP04234 171 aa20.68■□□□□ 0.9
NME3-209ENST00000566600 PTBP1P26599 531 aaKnown RBP eCLIP20.68■□□□□ 0.9
NME3-209ENST00000566600 EIF4EBP1Q13541 118 aaPredicted RBP20.68■□□□□ 0.9
NME3-209ENST00000566600 PLGLAQ15195 96 aa20.68■□□□□ 0.9
NME3-209ENST00000566600 LPCAT3Q6P1A2 487 aa20.68■□□□□ 0.9
NME3-209ENST00000566600 MFSD4AQ8N468 514 aa20.68■□□□□ 0.9
NME3-209ENST00000566600 ARRDC1Q8N5I2 433 aa20.68■□□□□ 0.9
NME3-209ENST00000566600 TCTEX1D2Q8WW35 142 aa20.68■□□□□ 0.9
NME3-209ENST00000566600 AP4M1O00189 453 aa20.67■□□□□ 0.9
NME3-209ENST00000566600 SHOXO15266 292 aa20.67■□□□□ 0.9
NME3-209ENST00000566600 CD74P04233 296 aa20.67■□□□□ 0.9
NME3-209ENST00000566600 SRSF4Q08170 494 aaKnown RBP20.67■□□□□ 0.9
NME3-209ENST00000566600 PSG5Q15238 335 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms