RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 IFT46Q9NQC8 304 aa13.65□□□□□ -0.22
USB1-209ENST00000564387 ZNF107Q9UII5 783 aaPredicted RBP13.65□□□□□ -0.22
USB1-209ENST00000564387 MRPS7Q9Y2R9 242 aaKnown RBP13.65□□□□□ -0.22
USB1-209ENST00000564387 RBM7Q9Y580 266 aaKnown RBP13.65□□□□□ -0.22
USB1-209ENST00000564387 LINC00473A8K010 186 aa13.64□□□□□ -0.23
USB1-209ENST00000564387 ADARB2-AS1A8MUL3 147 aa13.64□□□□□ -0.23
USB1-209ENST00000564387 H7C2Y5 167 aa13.64□□□□□ -0.23
USB1-209ENST00000564387 M0QZ24 198 aa13.64□□□□□ -0.23
USB1-209ENST00000564387 ZNF701M0R085 212 aaPredicted RBP13.64□□□□□ -0.23
USB1-209ENST00000564387 AP4M1O00189 453 aa13.64□□□□□ -0.23
USB1-209ENST00000564387 RRHO14718 337 aa13.64□□□□□ -0.23
USB1-209ENST00000564387 APOA2P02652 100 aa13.64□□□□□ -0.23
USB1-209ENST00000564387 FCGR2CP31995 323 aa13.64□□□□□ -0.23
USB1-209ENST00000564387 DYRK1AQ13627 763 aa13.64□□□□□ -0.23
USB1-209ENST00000564387 FOXRED2Q8IWF2 684 aa13.64□□□□□ -0.23
USB1-209ENST00000564387 STPG2Q8N412 459 aa13.64□□□□□ -0.23
USB1-209ENST00000564387 ABHD1Q96SE0 405 aa13.64□□□□□ -0.23
USB1-209ENST00000564387 HSPB9Q9BQS6 159 aa13.64□□□□□ -0.23
USB1-209ENST00000564387 EXTL2Q9UBQ6 330 aa13.64□□□□□ -0.23
USB1-209ENST00000564387 RBMX2Q9Y388 322 aaKnown RBP13.64□□□□□ -0.23
USB1-209ENST00000564387 MGAM2Q2M2H8 2515 aa13.64□□□□□ -0.23
USB1-209ENST00000564387 TET2Q6N021 2002 aaPredicted RBP13.63□□□□□ -0.23
USB1-209ENST00000564387 FAM25AB3EWG3 89 aa13.63□□□□□ -0.23
USB1-209ENST00000564387 FAM25CB3EWG5 89 aa13.63□□□□□ -0.23
USB1-209ENST00000564387 FAM25GB3EWG6 89 aa13.63□□□□□ -0.23
USB1-209ENST00000564387 NOL3O60936 208 aaKnown RBP13.63□□□□□ -0.23
USB1-209ENST00000564387 SPDEFO95238 335 aa13.63□□□□□ -0.23
USB1-209ENST00000564387 PPYP01298 95 aa13.63□□□□□ -0.23
USB1-209ENST00000564387 RRASP10301 218 aa13.63□□□□□ -0.23
USB1-209ENST00000564387 AADACP22760 399 aa13.63□□□□□ -0.23
USB1-209ENST00000564387 TAS2R46P59540 309 aa13.63□□□□□ -0.23
USB1-209ENST00000564387 TMEM177Q53S58 311 aa13.63□□□□□ -0.23
USB1-209ENST00000564387 LIN54Q6MZP7 749 aa13.63□□□□□ -0.23
USB1-209ENST00000564387 C10orf99Q6UWK7 81 aa13.63□□□□□ -0.23
USB1-209ENST00000564387 NDUFA11Q86Y39 141 aa13.63□□□□□ -0.23
USB1-209ENST00000564387 SNX29P2Q8IUI4 249 aa13.63□□□□□ -0.23
USB1-209ENST00000564387 LAX1Q8IWV1 398 aa13.63□□□□□ -0.23
USB1-209ENST00000564387 C15orf40Q8WUR7 153 aa13.63□□□□□ -0.23
USB1-209ENST00000564387 FLYWCH2Q96CP2 140 aaKnown RBP13.63□□□□□ -0.23
USB1-209ENST00000564387 NOL4LQ96MY1 436 aaPredicted RBP13.63□□□□□ -0.23
USB1-209ENST00000564387 CITED2Q99967 270 aaPredicted RBP13.63□□□□□ -0.23
USB1-209ENST00000564387 SLC35D1Q9NTN3 355 aa13.63□□□□□ -0.23
USB1-209ENST00000564387 NBEAL1Q6ZS30 2694 aa13.63□□□□□ -0.23
USB1-209ENST00000564387 IGHV7-81A0A0B4J1V7 117 aa13.62□□□□□ -0.23
USB1-209ENST00000564387 IGLV2-23P01705 113 aa13.62□□□□□ -0.23
USB1-209ENST00000564387 FCER2P06734 321 aa13.62□□□□□ -0.23
USB1-209ENST00000564387 CRYGBP07316 175 aa13.62□□□□□ -0.23
USB1-209ENST00000564387 LGALS7P47929 136 aa13.62□□□□□ -0.23
USB1-209ENST00000564387 RFX2P48378 723 aa13.62□□□□□ -0.23
USB1-209ENST00000564387 CFHR3Q02985 330 aa13.62□□□□□ -0.23
USB1-209ENST00000564387 PSG5Q15238 335 aa13.62□□□□□ -0.23
USB1-209ENST00000564387 C2orf68Q2NKX9 166 aa13.62□□□□□ -0.23
USB1-209ENST00000564387 C11orf44Q8N8P7 122 aa13.62□□□□□ -0.23
USB1-209ENST00000564387 TSNAXQ99598 290 aaKnown RBP13.62□□□□□ -0.23
USB1-209ENST00000564387 HSD17B10Q99714 261 aaKnown RBP13.62□□□□□ -0.23
USB1-209ENST00000564387 KIAA1456Q9P272 454 aa13.62□□□□□ -0.23
USB1-209ENST00000564387 PSMB11A5LHX3 300 aa13.61□□□□□ -0.23
USB1-209ENST00000564387 RCVRNP35243 200 aa13.61□□□□□ -0.23
USB1-209ENST00000564387 CRIP2P52943 208 aaPredicted RBP13.61□□□□□ -0.23
USB1-209ENST00000564387 COMMD1Q8N668 190 aa13.61□□□□□ -0.23
USB1-209ENST00000564387 RNF152Q8N8N0 203 aa13.61□□□□□ -0.23
USB1-209ENST00000564387 ZBTB34Q8NCN2 500 aa13.61□□□□□ -0.23
USB1-209ENST00000564387 BVESQ8NE79 360 aa13.61□□□□□ -0.23
USB1-209ENST00000564387 GON7Q9BXV9 100 aa13.61□□□□□ -0.23
USB1-209ENST00000564387 OR51J1Q9H342 316 aa13.61□□□□□ -0.23
USB1-209ENST00000564387 FBXL15Q9H469 300 aa13.61□□□□□ -0.23
USB1-209ENST00000564387 EHFQ9NZC4 300 aa13.61□□□□□ -0.23
USB1-209ENST00000564387 WNK1Q9H4A3 2382 aa13.61□□□□□ -0.23
USB1-209ENST00000564387 J3QRK9 145 aa13.6□□□□□ -0.23
USB1-209ENST00000564387 FCN1O00602 326 aa13.6□□□□□ -0.23
USB1-209ENST00000564387 RGS5O15539 181 aa13.6□□□□□ -0.23
USB1-209ENST00000564387 BRWD1-AS2P59051 145 aa13.6□□□□□ -0.23
USB1-209ENST00000564387 RPS16P62249 146 aaKnown RBP13.6□□□□□ -0.23
USB1-209ENST00000564387 RPL30P62888 115 aaKnown RBP13.6□□□□□ -0.23
USB1-209ENST00000564387 RTL8BQ17RB0 113 aa13.6□□□□□ -0.23
USB1-209ENST00000564387 HIST2H2BDQ6DRA6 164 aa13.6□□□□□ -0.23
USB1-209ENST00000564387 TREML4Q6UXN2 200 aa13.6□□□□□ -0.23
USB1-209ENST00000564387 ZNF66Q6ZN08 573 aa13.6□□□□□ -0.23
USB1-209ENST00000564387 ZNF329Q86UD4 541 aa13.6□□□□□ -0.23
USB1-209ENST00000564387 OR4X2Q8NGF9 303 aa13.6□□□□□ -0.23
USB1-209ENST00000564387 OR5H2Q8NGV7 314 aa13.6□□□□□ -0.23
USB1-209ENST00000564387 MOB3AQ96BX8 217 aa13.6□□□□□ -0.23
USB1-209ENST00000564387 SOSTQ9BQB4 213 aa13.6□□□□□ -0.23
USB1-209ENST00000564387 MMP27Q9H306 513 aa13.6□□□□□ -0.23
USB1-209ENST00000564387 RABL2AQ9UBK7 228 aaPredicted RBP13.6□□□□□ -0.23
USB1-209ENST00000564387 MTFP1Q9UDX5 166 aa13.6□□□□□ -0.23
USB1-209ENST00000564387 RSL24D1Q9UHA3 163 aaKnown RBP13.6□□□□□ -0.23
USB1-209ENST00000564387 LINC00527Q9UJ94 153 aa13.6□□□□□ -0.23
USB1-209ENST00000564387 RABL2BQ9UNT1 228 aa13.6□□□□□ -0.23
USB1-209ENST00000564387 SRRM4A7MD48 611 aaKnown RBP13.59□□□□□ -0.23
USB1-209ENST00000564387 CTDSPLO15194 276 aa13.59□□□□□ -0.23
USB1-209ENST00000564387 TSPAN15O95858 294 aa13.59□□□□□ -0.23
USB1-209ENST00000564387 PMP2P02689 132 aa13.59□□□□□ -0.23
USB1-209ENST00000564387 PPIFP30405 207 aaKnown RBP13.59□□□□□ -0.23
USB1-209ENST00000564387 HRH1P35367 487 aa13.59□□□□□ -0.23
USB1-209ENST00000564387 SLC35B1P78383 322 aa13.59□□□□□ -0.23
USB1-209ENST00000564387 MRPS10P82664 201 aaKnown RBP13.59□□□□□ -0.23
USB1-209ENST00000564387 C19orf54Q5BKX5 351 aa13.59□□□□□ -0.23
USB1-209ENST00000564387 VAX1Q5SQQ9 334 aa13.59□□□□□ -0.23
USB1-209ENST00000564387 ZNF562Q6V9R5 426 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 183.9 ms