RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 LINC01548A6NM66 108 aa7.78□□□□□ -1.16
CLK3-208ENST00000562626 TXNL1O43396 289 aa7.78□□□□□ -1.16
CLK3-208ENST00000562626 OR2F2O95006 317 aa7.78□□□□□ -1.16
CLK3-208ENST00000562626 GNRHRP30968 328 aa7.78□□□□□ -1.16
CLK3-208ENST00000562626 TAS2R19P59542 299 aa7.78□□□□□ -1.16
CLK3-208ENST00000562626 KRTAP10-3P60369 221 aa7.78□□□□□ -1.16
CLK3-208ENST00000562626 ACTBP60709 375 aa7.78□□□□□ -1.16
CLK3-208ENST00000562626 ACTG1P63261 375 aa7.78□□□□□ -1.16
CLK3-208ENST00000562626 MRPS10P82664 201 aaKnown RBP7.78□□□□□ -1.16
CLK3-208ENST00000562626 KLF9Q13886 244 aaPredicted RBP7.78□□□□□ -1.16
CLK3-208ENST00000562626 OR2B11Q5JQS5 317 aa7.78□□□□□ -1.16
CLK3-208ENST00000562626 STEAP1BQ6NZ63 245 aa7.78□□□□□ -1.16
CLK3-208ENST00000562626 Q8N402 240 aa7.78□□□□□ -1.16
CLK3-208ENST00000562626 C5orf56Q8N8D9 126 aa7.78□□□□□ -1.16
CLK3-208ENST00000562626 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.78□□□□□ -1.16
CLK3-208ENST00000562626 OR5AN1Q8NGI8 311 aa7.78□□□□□ -1.16
CLK3-208ENST00000562626 C15orf40Q8WUR7 153 aa7.78□□□□□ -1.16
CLK3-208ENST00000562626 THAP7Q9BT49 309 aaPredicted RBP7.78□□□□□ -1.16
CLK3-208ENST00000562626 TAS2R8Q9NYW2 309 aa7.78□□□□□ -1.16
CLK3-208ENST00000562626 PTTG2Q9NZH5 202 aa7.78□□□□□ -1.16
CLK3-208ENST00000562626 RBM7Q9Y580 266 aaKnown RBP7.78□□□□□ -1.16
CLK3-208ENST00000562626 PEX14O75381 377 aa7.77□□□□□ -1.17
CLK3-208ENST00000562626 RAB3DO95716 219 aa7.77□□□□□ -1.17
CLK3-208ENST00000562626 MOSP00540 346 aa7.77□□□□□ -1.17
CLK3-208ENST00000562626 PI3P19957 117 aa7.77□□□□□ -1.17
CLK3-208ENST00000562626 PPP5CP53041 499 aa7.77□□□□□ -1.17
CLK3-208ENST00000562626 RAG2P55895 527 aa7.77□□□□□ -1.17
CLK3-208ENST00000562626 HERV-K104P61576 105 aa7.77□□□□□ -1.17
CLK3-208ENST00000562626 SSBP1Q04837 148 aaKnown RBP7.77□□□□□ -1.17
CLK3-208ENST00000562626 ABCA11PQ4W5N1 156 aa7.77□□□□□ -1.17
CLK3-208ENST00000562626 RNASE10Q5GAN6 216 aaKnown RBP7.77□□□□□ -1.17
CLK3-208ENST00000562626 SPANXN2Q5MJ10 180 aa7.77□□□□□ -1.17
CLK3-208ENST00000562626 C11orf88Q6PI97 169 aa7.77□□□□□ -1.17
CLK3-208ENST00000562626 FAM71E2Q8N5Q1 922 aa7.77□□□□□ -1.17
CLK3-208ENST00000562626 Q8N9W7 124 aa7.77□□□□□ -1.17
CLK3-208ENST00000562626 BVESQ8NE79 360 aa7.77□□□□□ -1.17
CLK3-208ENST00000562626 OR13C8Q8NGS7 320 aa7.77□□□□□ -1.17
CLK3-208ENST00000562626 OR2T10Q8NGZ9 312 aa7.77□□□□□ -1.17
CLK3-208ENST00000562626 LINC01006Q8NI28 216 aa7.77□□□□□ -1.17
CLK3-208ENST00000562626 TPSG1Q9NRR2 321 aa7.77□□□□□ -1.17
CLK3-208ENST00000562626 RABL2AQ9UBK7 228 aaPredicted RBP7.77□□□□□ -1.17
CLK3-208ENST00000562626 RABL2BQ9UNT1 228 aa7.77□□□□□ -1.17
CLK3-208ENST00000562626 MOB4Q9Y3A3 225 aa7.77□□□□□ -1.17
CLK3-208ENST00000562626 SRRM4A7MD48 611 aaKnown RBP7.76□□□□□ -1.17
CLK3-208ENST00000562626 H7C2Y5 167 aa7.76□□□□□ -1.17
CLK3-208ENST00000562626 RAMP3O60896 148 aa7.76□□□□□ -1.17
CLK3-208ENST00000562626 TSPAN9O75954 239 aa7.76□□□□□ -1.17
CLK3-208ENST00000562626 NDUFA7O95182 113 aa7.76□□□□□ -1.17
CLK3-208ENST00000562626 IGLV2-23P01705 113 aa7.76□□□□□ -1.17
CLK3-208ENST00000562626 FAM106CPP0CH98 169 aa7.76□□□□□ -1.17
CLK3-208ENST00000562626 VSIG10L2P0DP72 767 aa7.76□□□□□ -1.17
CLK3-208ENST00000562626 PTBP1P26599 531 aaKnown RBP eCLIP7.76□□□□□ -1.17
CLK3-208ENST00000562626 ARHGDIBP52566 201 aa7.76□□□□□ -1.17
CLK3-208ENST00000562626 TSPAN5P62079 268 aa7.76□□□□□ -1.17
CLK3-208ENST00000562626 SRSF4Q08170 494 aaKnown RBP7.76□□□□□ -1.17
CLK3-208ENST00000562626 MRGPRG-AS1Q2M3A8 158 aa7.76□□□□□ -1.17
CLK3-208ENST00000562626 PHLDA2Q53GA4 152 aa7.76□□□□□ -1.17
CLK3-208ENST00000562626 ACTBL2Q562R1 376 aa7.76□□□□□ -1.17
CLK3-208ENST00000562626 AWAT1Q58HT5 328 aa7.76□□□□□ -1.17
CLK3-208ENST00000562626 LIAT1Q6ZQX7 453 aa7.76□□□□□ -1.17
CLK3-208ENST00000562626 OR6F1Q8NGZ6 308 aa7.76□□□□□ -1.17
CLK3-208ENST00000562626 TMEM158Q8WZ71 300 aa7.76□□□□□ -1.17
CLK3-208ENST00000562626 HSPB9Q9BQS6 159 aa7.76□□□□□ -1.17
CLK3-208ENST00000562626 GHITMQ9H3K2 345 aa7.76□□□□□ -1.17
CLK3-208ENST00000562626 SLC35D1Q9NTN3 355 aa7.76□□□□□ -1.17
CLK3-208ENST00000562626 SERTAD4Q9NUC0 356 aa7.76□□□□□ -1.17
CLK3-208ENST00000562626 ZNF107Q9UII5 783 aaPredicted RBP7.76□□□□□ -1.17
CLK3-208ENST00000562626 PITPNC1Q9UKF7 332 aa7.76□□□□□ -1.17
CLK3-208ENST00000562626 WASHC3Q9Y3C0 194 aa7.76□□□□□ -1.17
CLK3-208ENST00000562626 ANK2Q01484 3957 aa7.76□□□□□ -1.17
CLK3-208ENST00000562626 FCN1O00602 326 aa7.75□□□□□ -1.17
CLK3-208ENST00000562626 CSF1P09603 554 aa7.75□□□□□ -1.17
CLK3-208ENST00000562626 AKAIN1P0CW23 69 aa7.75□□□□□ -1.17
CLK3-208ENST00000562626 IL7P13232 177 aa7.75□□□□□ -1.17
CLK3-208ENST00000562626 TBPP20226 339 aa7.75□□□□□ -1.17
CLK3-208ENST00000562626 THBS3P49746 956 aa7.75□□□□□ -1.17
CLK3-208ENST00000562626 RPL15P61313 204 aaKnown RBP7.75□□□□□ -1.17
CLK3-208ENST00000562626 SSBP2P81877 361 aaPredicted RBP7.75□□□□□ -1.17
CLK3-208ENST00000562626 SCGB2B2Q4G0G5 96 aa7.75□□□□□ -1.17
CLK3-208ENST00000562626 C10orf99Q6UWK7 81 aa7.75□□□□□ -1.17
CLK3-208ENST00000562626 KCTD9Q7L273 389 aa7.75□□□□□ -1.17
CLK3-208ENST00000562626 Q8N2B8 174 aa7.75□□□□□ -1.17
CLK3-208ENST00000562626 ARRDC1Q8N5I2 433 aa7.75□□□□□ -1.17
CLK3-208ENST00000562626 OR51S1Q8NGJ8 323 aa7.75□□□□□ -1.17
CLK3-208ENST00000562626 MARCH1Q8TCQ1 289 aa7.75□□□□□ -1.17
CLK3-208ENST00000562626 RSRP1Q9BUV0 290 aa7.75□□□□□ -1.17
CLK3-208ENST00000562626 NPFFR1Q9GZQ6 430 aa7.75□□□□□ -1.17
CLK3-208ENST00000562626 FBXL15Q9H469 300 aa7.75□□□□□ -1.17
CLK3-208ENST00000562626 C16orf95Q9H693 158 aa7.75□□□□□ -1.17
CLK3-208ENST00000562626 HRASLSQ9HDD0 168 aa7.75□□□□□ -1.17
CLK3-208ENST00000562626 LINC00527Q9UJ94 153 aa7.75□□□□□ -1.17
CLK3-208ENST00000562626 LINC00854A0A1B0GVQ3 168 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 NCBP2LA6PVI3 153 aaKnown RBP7.74□□□□□ -1.17
CLK3-208ENST00000562626 NBR2O15453 112 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 FCGR3BO75015 233 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 PGLYRP1O75594 196 aaPredicted RBP7.74□□□□□ -1.17
CLK3-208ENST00000562626 NDUFA3O95167 84 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 CRYZL1O95825 349 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 RLN1P04808 185 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 CRYBA1P05813 215 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms