RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 ZNF329Q86UD4 541 aa6.36□□□□□ -1.39
LRRC28-219ENST00000560483 GVQW1Q8N7I0 195 aa6.36□□□□□ -1.39
LRRC28-219ENST00000560483 C5orf56Q8N8D9 126 aa6.36□□□□□ -1.39
LRRC28-219ENST00000560483 RAB2BQ8WUD1 216 aa6.36□□□□□ -1.39
LRRC28-219ENST00000560483 ST6GALNAC6Q969X2 333 aa6.36□□□□□ -1.39
LRRC28-219ENST00000560483 FANCD2OSQ96PS1 177 aa6.36□□□□□ -1.39
LRRC28-219ENST00000560483 CLCC1Q96S66 551 aa6.36□□□□□ -1.39
LRRC28-219ENST00000560483 CITED1Q99966 193 aa6.36□□□□□ -1.39
LRRC28-219ENST00000560483 AUNIPQ9H7T9 357 aa6.36□□□□□ -1.39
LRRC28-219ENST00000560483 NECAP2Q9NVZ3 263 aa6.36□□□□□ -1.39
LRRC28-219ENST00000560483 ANXA10Q9UJ72 324 aa6.36□□□□□ -1.39
LRRC28-219ENST00000560483 ADAM30Q9UKF2 790 aa6.36□□□□□ -1.39
LRRC28-219ENST00000560483 WASHC3Q9Y3C0 194 aa6.36□□□□□ -1.39
LRRC28-219ENST00000560483 A3GALT2U3KPV4 340 aa6.36□□□□□ -1.39
LRRC28-219ENST00000560483 TENM1Q9UKZ4 2725 aa6.36□□□□□ -1.39
LRRC28-219ENST00000560483 IGKV1D-8A0A087WSZ0 117 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 NUDT19A8MXV4 375 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 ITGB1BP1O14713 200 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 KCNAB3O43448 404 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 TSPAN15O95858 294 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 EIF4EP06730 217 aaKnown RBP6.35□□□□□ -1.39
LRRC28-219ENST00000560483 CT45A6P0DMU7 189 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 CT45A5P0DMU8 189 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 CT45A7P0DMV0 189 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 ZNF182P17025 639 aaPredicted RBP6.35□□□□□ -1.39
LRRC28-219ENST00000560483 VDAC1P21796 283 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 CNTFRP26992 372 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 FCGR2CP31995 323 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 PRSS3P35030 304 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 ZNF137PP52743 207 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 KRTAP10-3P60369 221 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 HERV-K104P61576 105 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 GNB1P62873 340 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 CTF1Q16619 201 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 RTL8BQ17RB0 113 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 KRTAP19-4Q3LI73 84 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 LY6G6FQ5SQ64 297 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 KRTAP5-3Q6L8H2 238 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 FAM71F2Q6NXP2 309 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 ODF3L1Q8IXM7 274 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 OR8H1Q8NGG4 311 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 OR5H2Q8NGV7 314 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 CHPT1Q8WUD6 406 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 SECTM1Q8WVN6 248 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 FLYWCH2Q96CP2 140 aaKnown RBP6.35□□□□□ -1.39
LRRC28-219ENST00000560483 NOL4LQ96MY1 436 aaPredicted RBP6.35□□□□□ -1.39
LRRC28-219ENST00000560483 CABLES2Q9BTV7 478 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 C6orf62Q9GZU0 229 aaPredicted RBP6.35□□□□□ -1.39
LRRC28-219ENST00000560483 ABCG5Q9H222 651 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.35□□□□□ -1.39
LRRC28-219ENST00000560483 PARP11Q9NR21 331 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 SLC35D1Q9NTN3 355 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 SERTAD4Q9NUC0 356 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 LIN7CQ9NUP9 197 aaKnown RBP6.35□□□□□ -1.39
LRRC28-219ENST00000560483 EHFQ9NZC4 300 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 EXTL2Q9UBQ6 330 aa6.35□□□□□ -1.39
LRRC28-219ENST00000560483 ZNF107Q9UII5 783 aaPredicted RBP6.35□□□□□ -1.39
LRRC28-219ENST00000560483 AP4M1O00189 453 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 SHOXO15266 292 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 SSX5O60225 188 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 CNIH1O95406 144 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 APOA1P02647 267 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 PMP2P02689 132 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 PF4P02776 101 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 OPN1MWP04001 364 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 OPN1MW2P0DN77 364 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 OPN1MW3P0DN78 364 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 ELK1P19419 428 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 HLA-DMAP28067 261 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 ALDH3B2P48448 385 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 THBS3P49746 956 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 TSPAN5P62079 268 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 SPCS2Q15005 226 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 SRSF7Q16629 238 aaKnown RBP eCLIP6.34□□□□□ -1.39
LRRC28-219ENST00000560483 ECSCRQ19T08 205 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 OR2B11Q5JQS5 317 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 LIN54Q6MZP7 749 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 TMEM17Q86X19 198 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 HOGA1Q86XE5 327 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 H1FOOQ8IZA3 346 aaPredicted RBP6.34□□□□□ -1.39
LRRC28-219ENST00000560483 Q8N2B8 174 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 Q8N9W7 124 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.34□□□□□ -1.39
LRRC28-219ENST00000560483 TCTEX1D2Q8WW35 142 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 R3HDM4Q96D70 268 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 HARBI1Q96MB7 349 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 TSNAXQ99598 290 aaKnown RBP6.34□□□□□ -1.39
LRRC28-219ENST00000560483 CITED2Q99967 270 aaPredicted RBP6.34□□□□□ -1.39
LRRC28-219ENST00000560483 GON7Q9BXV9 100 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 FBXL15Q9H469 300 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 SDHAF2Q9NX18 166 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 TAS2R8Q9NYW2 309 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 METTL1Q9UBP6 276 aaKnown RBP6.34□□□□□ -1.39
LRRC28-219ENST00000560483 PRELID3BQ9Y3B1 194 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 OR2W1Q9Y3N9 320 aa6.34□□□□□ -1.39
LRRC28-219ENST00000560483 H0YJW9 148 aa6.33□□□□□ -1.4
LRRC28-219ENST00000560483 TNFSF12O43508 249 aa6.33□□□□□ -1.4
LRRC28-219ENST00000560483 FCGR3BO75015 233 aa6.33□□□□□ -1.4
LRRC28-219ENST00000560483 RBBP9O75884 186 aa6.33□□□□□ -1.4
LRRC28-219ENST00000560483 SLC22A5O76082 557 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms