RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 SIX6O95475 246 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 MSMBP08118 114 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 CT45A6P0DMU7 189 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 CT45A5P0DMU8 189 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 CT45A7P0DMV0 189 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 ZNF16P17020 682 aaPredicted RBP5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 HOXB4P17483 251 aaPredicted RBP5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 COX7A1P24310 79 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 THBS3P49746 956 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 CD83Q01151 205 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 CD300CQ08708 224 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 CATR1Q13166 79 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 KLRD1Q13241 179 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 HLA-DRB5Q30154 266 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 DCAF12L2Q5VW00 463 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 TMEM268Q5VZI3 342 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 FAM71F2Q6NXP2 309 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 LYZL2Q7Z4W2 148 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 SELENOHQ8IZQ5 122 aaKnown RBP5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 SPAG16Q8N0X2 631 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 LGI3Q8N145 548 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 TCTEX1D1Q8N7M0 179 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 ZNF383Q8NA42 475 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 DRAXINQ8NBI3 349 aaPredicted RBP5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 TCTEX1D2Q8WW35 142 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 DDB2Q92466 427 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 TMEM186Q96B77 213 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 OR2A7Q96R45 310 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 S1PR3Q99500 378 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 FOXC2Q99958 501 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 RANGRFQ9HD47 186 aaPredicted RBP5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 RAB18Q9NP72 206 aa5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 FAM212BQ9NTI7 297 aaPredicted RBP5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 LIN7CQ9NUP9 197 aaKnown RBP5.88□□□□□ -1.47
HMBOX1-214ENST00000560357 NBPF19A0A087WUL8 3843 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 PDZD2O15018 2839 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 TRAV20A0A0B4J274 112 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 MPTX1A8MV57 137 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 LY6LH3BQJ8 138 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 CCSO14618 274 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 RBFOX2O43251 390 aaKnown RBP eCLIP5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 RAMP3O60896 148 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 IGKV1-39P01597 117 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 IGKV1D-39P04432 117 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 ARG1P05089 322 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 SERPINE2P07093 398 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 HOXB5P09067 269 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 IGHV4-31P0DP07 118 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 IL3RAP26951 378 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 LPAR6P43657 344 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 H2BFSP57053 126 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 SRPXP78539 464 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 SRSF4Q08170 494 aaKnown RBP5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 DIAPH2-AS1Q14236 149 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 OR2B11Q5JQS5 317 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 LDLRAD2Q5SZI1 272 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 ZNF695Q8IW36 515 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 SLC35G3Q8N808 338 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 LINC01356Q8N9X3 169 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 MAPK1IP1LQ8NDC0 245 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 WFDC11Q8NEX6 87 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 OR4P4Q8NGL7 312 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 OR5M8Q8NGP6 311 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 RBPMSQ93062 196 aaKnown RBP5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 IL22RA2Q969J5 263 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 WDR89Q96FK6 387 aaPredicted RBP5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 ADTRPQ96IZ2 230 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 FYTTD1Q96QD9 318 aaKnown RBP5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 NABP2Q9BQ15 211 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 PCGF1Q9BSM1 259 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 MRPL20Q9BYC9 149 aaKnown RBP5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 ZNF436Q9C0F3 470 aaPredicted RBP5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 PRELID3BQ9Y3B1 194 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 AMMECR1Q9Y4X0 333 aaPredicted RBP5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 ITPR2Q14571 2701 aa5.87□□□□□ -1.47
HMBOX1-214ENST00000560357 C13orf42A0A1B0GVH6 325 aa5.86□□□□□ -1.47
HMBOX1-214ENST00000560357 DUXBA0A1W2PPF3 345 aa5.86□□□□□ -1.47
HMBOX1-214ENST00000560357 C5orf51A6NDU8 294 aa5.86□□□□□ -1.47
HMBOX1-214ENST00000560357 FCGR3BO75015 233 aa5.86□□□□□ -1.47
HMBOX1-214ENST00000560357 IFNA21P01568 189 aa5.86□□□□□ -1.47
HMBOX1-214ENST00000560357 GAPDHP04406 335 aaKnown RBP5.86□□□□□ -1.47
HMBOX1-214ENST00000560357 GIPP09681 153 aaPredicted RBP5.86□□□□□ -1.47
HMBOX1-214ENST00000560357 RPA2P15927 270 aa5.86□□□□□ -1.47
HMBOX1-214ENST00000560357 GATA3P23771 443 aa5.86□□□□□ -1.47
HMBOX1-214ENST00000560357 HTR1DP28221 377 aa5.86□□□□□ -1.47
HMBOX1-214ENST00000560357 KIR2DS2P43631 304 aa5.86□□□□□ -1.47
HMBOX1-214ENST00000560357 REG1BP48304 166 aa5.86□□□□□ -1.47
HMBOX1-214ENST00000560357 UBE2E1P51965 193 aa5.86□□□□□ -1.47
HMBOX1-214ENST00000560357 ZNF816Q0VGE8 651 aaPredicted RBP5.86□□□□□ -1.47
HMBOX1-214ENST00000560357 TMEM249Q2WGJ8 235 aa5.86□□□□□ -1.47
HMBOX1-214ENST00000560357 NMSQ5H8A3 153 aa5.86□□□□□ -1.47
HMBOX1-214ENST00000560357 TPTE2P1Q5T6R2 138 aa5.86□□□□□ -1.47
HMBOX1-214ENST00000560357 GGNBP1Q5YKI7 109 aa5.86□□□□□ -1.47
HMBOX1-214ENST00000560357 GSG1LQ6UXU4 331 aa5.86□□□□□ -1.47
HMBOX1-214ENST00000560357 LHFPL4Q7Z7J7 247 aa5.86□□□□□ -1.47
HMBOX1-214ENST00000560357 TGIF2LXQ8IUE1 241 aa5.86□□□□□ -1.47
HMBOX1-214ENST00000560357 PDZD9Q8IXQ8 264 aa5.86□□□□□ -1.47
HMBOX1-214ENST00000560357 TCTE3Q8IZS6 198 aa5.86□□□□□ -1.47
HMBOX1-214ENST00000560357 OR5AN1Q8NGI8 311 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms