RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 SPDEFO95238 335 aa9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 RAB3DO95716 219 aa9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 PMP2P02689 132 aa9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 FCER2P06734 321 aa9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 AADACP22760 399 aa9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 RFX2P48378 723 aa9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 RAG2P55895 527 aa9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 DGCR2P98153 550 aa9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 DIAPH2-AS1Q14236 149 aa9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 KRTAP24-1Q3LI83 254 aa9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 RPL39P5Q59GN2 51 aa9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 ZNF660Q6AZW8 331 aaPredicted RBP9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 FAM53AQ6NSI3 398 aaPredicted RBP9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 POC5Q8NA72 575 aa9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 FLYWCH2Q96CP2 140 aaKnown RBP9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 DUX5Q96PT3 197 aa9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 TSNAXQ99598 290 aaKnown RBP9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 PRRT1Q99946 306 aa9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 ZNF2Q9BSG1 426 aaPredicted RBP9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 MRPL20Q9BYC9 149 aaKnown RBP9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 SLC5A7Q9GZV3 580 aa9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 PARP12Q9H0J9 701 aaKnown RBP9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 TNFRSF19Q9NS68 423 aa9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 LIN7CQ9NUP9 197 aaKnown RBP9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 SCP2D1Q9UJQ7 156 aa9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 V9GYH0 126 aa9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 ANKRD20A5PA0PJZ0 165 aa9.64□□□□□ -0.87
RABGGTA-215ENST00000560207 H0YJW9 148 aa9.64□□□□□ -0.87
RABGGTA-215ENST00000560207 RBFOX2O43251 390 aaKnown RBP eCLIP9.64□□□□□ -0.87
RABGGTA-215ENST00000560207 KCNAB3O43448 404 aa9.64□□□□□ -0.87
RABGGTA-215ENST00000560207 CD3DP04234 171 aa9.64□□□□□ -0.87
RABGGTA-215ENST00000560207 DUTP33316 252 aaKnown RBP9.64□□□□□ -0.87
RABGGTA-215ENST00000560207 INPP1P49441 399 aa9.64□□□□□ -0.87
RABGGTA-215ENST00000560207 SURF2Q15527 256 aaPredicted RBP9.64□□□□□ -0.87
RABGGTA-215ENST00000560207 CNPY1Q3B7I2 92 aa9.64□□□□□ -0.87
RABGGTA-215ENST00000560207 CCBE1Q6UXH8 406 aaPredicted RBP9.64□□□□□ -0.87
RABGGTA-215ENST00000560207 SLC38A6Q8IZM9 456 aa9.64□□□□□ -0.87
RABGGTA-215ENST00000560207 Q8N2B8 174 aa9.64□□□□□ -0.87
RABGGTA-215ENST00000560207 Q8N6K4 173 aa9.64□□□□□ -0.87
RABGGTA-215ENST00000560207 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.64□□□□□ -0.87
RABGGTA-215ENST00000560207 BVESQ8NE79 360 aa9.64□□□□□ -0.87
RABGGTA-215ENST00000560207 TERB2Q8NHR7 220 aa9.64□□□□□ -0.87
RABGGTA-215ENST00000560207 OSR1Q8TAX0 266 aaPredicted RBP9.64□□□□□ -0.87
RABGGTA-215ENST00000560207 ZFAND1Q8TCF1 268 aa9.64□□□□□ -0.87
RABGGTA-215ENST00000560207 SECTM1Q8WVN6 248 aa9.64□□□□□ -0.87
RABGGTA-215ENST00000560207 RASL11BQ9BPW5 248 aa9.64□□□□□ -0.87
RABGGTA-215ENST00000560207 GON7Q9BXV9 100 aa9.64□□□□□ -0.87
RABGGTA-215ENST00000560207 FAM212BQ9NTI7 297 aaPredicted RBP9.64□□□□□ -0.87
RABGGTA-215ENST00000560207 SLC35D1Q9NTN3 355 aa9.64□□□□□ -0.87
RABGGTA-215ENST00000560207 PIGBOS1A0A0B4J2F0 54 aa9.63□□□□□ -0.87
RABGGTA-215ENST00000560207 CLPSL1A2RUU4 121 aa9.63□□□□□ -0.87
RABGGTA-215ENST00000560207 NCBP2LA6PVI3 153 aaKnown RBP9.63□□□□□ -0.87
RABGGTA-215ENST00000560207 GPR31O00270 319 aa9.63□□□□□ -0.87
RABGGTA-215ENST00000560207 NBR2O15453 112 aa9.63□□□□□ -0.87
RABGGTA-215ENST00000560207 CREBL2O60519 120 aaPredicted RBP9.63□□□□□ -0.87
RABGGTA-215ENST00000560207 PROP1O75360 226 aa9.63□□□□□ -0.87
RABGGTA-215ENST00000560207 B3GALNT1O75752 331 aa9.63□□□□□ -0.87
RABGGTA-215ENST00000560207 KCTD9Q7L273 389 aa9.63□□□□□ -0.87
RABGGTA-215ENST00000560207 TOMM5Q8N4H5 51 aa9.63□□□□□ -0.87
RABGGTA-215ENST00000560207 NPBQ8NG41 125 aa9.63□□□□□ -0.87
RABGGTA-215ENST00000560207 SPATA3Q8NHX4 192 aa9.63□□□□□ -0.87
RABGGTA-215ENST00000560207 SLC2A8Q9NY64 477 aa9.63□□□□□ -0.87
RABGGTA-215ENST00000560207 ZNF580Q9UK33 172 aa9.63□□□□□ -0.87
RABGGTA-215ENST00000560207 IGKV1D-13A0A0B4J2D9 117 aa9.62□□□□□ -0.87
RABGGTA-215ENST00000560207 NAP1L6A6NFF2 107 aa9.62□□□□□ -0.87
RABGGTA-215ENST00000560207 CENPXA8MT69 81 aa9.62□□□□□ -0.87
RABGGTA-215ENST00000560207 CHST1O43916 411 aa9.62□□□□□ -0.87
RABGGTA-215ENST00000560207 AMY2AP04746 511 aa9.62□□□□□ -0.87
RABGGTA-215ENST00000560207 IGKV1-13P0DP09 117 aa9.62□□□□□ -0.87
RABGGTA-215ENST00000560207 PAX6P26367 422 aa9.62□□□□□ -0.87
RABGGTA-215ENST00000560207 FXYD4P59646 89 aa9.62□□□□□ -0.87
RABGGTA-215ENST00000560207 MMDQ15546 238 aa9.62□□□□□ -0.87
RABGGTA-215ENST00000560207 TMEM177Q53S58 311 aa9.62□□□□□ -0.87
RABGGTA-215ENST00000560207 ARSJQ5FYB0 599 aaPredicted RBP9.62□□□□□ -0.87
RABGGTA-215ENST00000560207 TRIQKQ629K1 86 aa9.62□□□□□ -0.87
RABGGTA-215ENST00000560207 C12orf54Q6X4T0 127 aa9.62□□□□□ -0.87
RABGGTA-215ENST00000560207 Q6ZSV7 163 aa9.62□□□□□ -0.87
RABGGTA-215ENST00000560207 LHFPL1Q86WI0 220 aa9.62□□□□□ -0.87
RABGGTA-215ENST00000560207 TMEM219Q86XT9 240 aa9.62□□□□□ -0.87
RABGGTA-215ENST00000560207 MFSD4AQ8N468 514 aa9.62□□□□□ -0.87
RABGGTA-215ENST00000560207 ZNF383Q8NA42 475 aa9.62□□□□□ -0.87
RABGGTA-215ENST00000560207 OR4S2Q8NH73 311 aa9.62□□□□□ -0.87
RABGGTA-215ENST00000560207 VSTM2AQ8TAG5 236 aa9.62□□□□□ -0.87
RABGGTA-215ENST00000560207 DDB2Q92466 427 aa9.62□□□□□ -0.87
RABGGTA-215ENST00000560207 C7orf50Q9BRJ6 194 aaKnown RBP9.62□□□□□ -0.87
RABGGTA-215ENST00000560207 CCDC32Q9BV29 185 aa9.62□□□□□ -0.87
RABGGTA-215ENST00000560207 COL6A5A8TX70 2615 aa9.62□□□□□ -0.87
RABGGTA-215ENST00000560207 IGHV3-72A0A0B4J1Y9 119 aa9.61□□□□□ -0.87
RABGGTA-215ENST00000560207 PEX14O75381 377 aa9.61□□□□□ -0.87
RABGGTA-215ENST00000560207 NDUFA3O95167 84 aa9.61□□□□□ -0.87
RABGGTA-215ENST00000560207 HRASP01112 189 aa9.61□□□□□ -0.87
RABGGTA-215ENST00000560207 IGLV2-14P01704 120 aa9.61□□□□□ -0.87
RABGGTA-215ENST00000560207 CD24P25063 80 aa9.61□□□□□ -0.87
RABGGTA-215ENST00000560207 CD40LGP29965 261 aa9.61□□□□□ -0.87
RABGGTA-215ENST00000560207 GNRHRP30968 328 aa9.61□□□□□ -0.87
RABGGTA-215ENST00000560207 RPS16P62249 146 aaKnown RBP9.61□□□□□ -0.87
RABGGTA-215ENST00000560207 HNF4GQ14541 408 aa9.61□□□□□ -0.87
RABGGTA-215ENST00000560207 ZNF79Q15937 498 aa9.61□□□□□ -0.87
RABGGTA-215ENST00000560207 VMA21Q3ZAQ7 101 aa9.61□□□□□ -0.87
RABGGTA-215ENST00000560207 ABCA11PQ4W5N1 156 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms