RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 Q6ZSV7 163 aa3.71□□□□□ -1.82
ATXN3-231ENST00000554994 NR2C2APQ86WQ0 139 aa3.71□□□□□ -1.82
ATXN3-231ENST00000554994 TGIF2LXQ8IUE1 241 aa3.71□□□□□ -1.82
ATXN3-231ENST00000554994 CLVS1Q8IUQ0 354 aaPredicted RBP3.71□□□□□ -1.82
ATXN3-231ENST00000554994 FAM89BQ8N5H3 189 aa3.71□□□□□ -1.82
ATXN3-231ENST00000554994 SAMD12Q8N8I0 201 aa3.71□□□□□ -1.82
ATXN3-231ENST00000554994 OR2AK2Q8NG84 335 aa3.71□□□□□ -1.82
ATXN3-231ENST00000554994 OR52M1Q8NGK5 317 aa3.71□□□□□ -1.82
ATXN3-231ENST00000554994 OR4P4Q8NGL7 312 aa3.71□□□□□ -1.82
ATXN3-231ENST00000554994 OR10J5Q8NHC4 309 aa3.71□□□□□ -1.82
ATXN3-231ENST00000554994 CT45A3Q8NHU0 189 aa3.71□□□□□ -1.82
ATXN3-231ENST00000554994 LGALS14Q8TCE9 139 aa3.71□□□□□ -1.82
ATXN3-231ENST00000554994 SCARB1Q8WTV0 552 aa3.71□□□□□ -1.82
ATXN3-231ENST00000554994 ST8SIA2Q92186 375 aa3.71□□□□□ -1.82
ATXN3-231ENST00000554994 ABHD14BQ96IU4 210 aa3.71□□□□□ -1.82
ATXN3-231ENST00000554994 AKR1E2Q96JD6 320 aa3.71□□□□□ -1.82
ATXN3-231ENST00000554994 S1PR3Q99500 378 aa3.71□□□□□ -1.82
ATXN3-231ENST00000554994 RASL11BQ9BPW5 248 aa3.71□□□□□ -1.82
ATXN3-231ENST00000554994 SLC25A33Q9BSK2 321 aa3.71□□□□□ -1.82
ATXN3-231ENST00000554994 NAA50Q9GZZ1 169 aaKnown RBP3.71□□□□□ -1.82
ATXN3-231ENST00000554994 Q9N2K0 584 aa3.71□□□□□ -1.82
ATXN3-231ENST00000554994 RCC2Q9P258 522 aaKnown RBP3.71□□□□□ -1.82
ATXN3-231ENST00000554994 ZNF221Q9UK13 617 aa3.71□□□□□ -1.82
ATXN3-231ENST00000554994 ELF5Q9UKW6 265 aaPredicted RBP3.71□□□□□ -1.82
ATXN3-231ENST00000554994 HSF4Q9ULV5 492 aa3.71□□□□□ -1.82
ATXN3-231ENST00000554994 U3KQK5 164 aa3.71□□□□□ -1.82
ATXN3-231ENST00000554994 IGHV1-3A0A0C4DH29 117 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 A0A1B0GUS0 222 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 A6NDX4 124 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 TMEM235A6NFC5 223 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 ZNF736B4DX44 427 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-231ENST00000554994 LY6LH3BQJ8 138 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 RGS5O15539 181 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 CHST1O43916 411 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 YPEL1O60688 119 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 TUSC2O75896 110 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 IGLV1-47P01700 117 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 OR8U9P0C7N5 309 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 SMIM18P0DKX4 95 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 CD37P11049 281 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 PTHLHP12272 177 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 HIST1H1DP16402 221 aaKnown RBP3.7□□□□□ -1.82
ATXN3-231ENST00000554994 CD34P28906 385 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 SOX6P35712 828 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 VDAC2P45880 294 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-231ENST00000554994 GPR12P47775 334 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 RORCP51449 518 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 ARPC4P59998 168 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 HLA-DRB3P79483 266 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 HTD2P86397 168 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 DCTN2Q13561 401 aaKnown RBP3.7□□□□□ -1.82
ATXN3-231ENST00000554994 PLGLAQ15195 96 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 AANATQ16613 207 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 NSUN5P1Q3KNT7 163 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 RPL39P5Q59GN2 51 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 IGSF11Q5DX21 431 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 KHDC1LQ5JSQ8 128 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 MZT2AQ6P582 158 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 GLDNQ6ZMI3 551 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-231ENST00000554994 OR2T10Q8NGZ9 312 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 OR8U1Q8NH10 309 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 LINC01006Q8NI28 216 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 MUC7Q8TAX7 377 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 PIFOQ8TCI5 191 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 ABHD5Q8WTS1 349 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 NUDCD2Q8WVJ2 157 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 RBM14Q96PK6 669 aaKnown RBP3.7□□□□□ -1.82
ATXN3-231ENST00000554994 YPEL2Q96QA6 119 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 CLCC1Q96S66 551 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 ZNF251Q9BRH9 671 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 DCUN1D5Q9BTE7 237 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 ABHD14AQ9BUJ0 271 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 C11orf54Q9H0W9 315 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-231ENST00000554994 RBM38Q9H0Z9 239 aaKnown RBP3.7□□□□□ -1.82
ATXN3-231ENST00000554994 DCSTAMPQ9H295 470 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 PALMDQ9NP74 551 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 C12orf4Q9NQ89 552 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 IFT46Q9NQC8 304 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 RHBDL2Q9NX52 303 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 OR1A1Q9P1Q5 309 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 RSL24D1Q9UHA3 163 aaKnown RBP3.7□□□□□ -1.82
ATXN3-231ENST00000554994 LINC00527Q9UJ94 153 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 MGAT4AQ9UM21 535 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 TCF19Q9Y242 345 aa3.7□□□□□ -1.82
ATXN3-231ENST00000554994 TNCP24821 2201 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 A0A087X0M5 115 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 A0A1B0GX30 115 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 WI2-2373I1.2A0A1W2PRP0 233 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 TCRBV4S1A1TA0A5B7 111 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 SERPINE3A8MV23 424 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 OOSP1A8MZH6 123 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 M0R1X1 148 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 RAB27BO00194 218 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 RAB29O14966 203 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 LDLRAD4O15165 306 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 FABP7O15540 132 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 HPGDSO60760 199 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 SCGNO76038 276 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 NDUFA7O95182 113 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 NAPSAO96009 420 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms