RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 SLC33A1O00400 549 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-214ENST00000554604 SH2D1BO14796 132 aa10.12□□□□□ -0.79
SHMT2-214ENST00000554604 GPR137BO60478 399 aa10.12□□□□□ -0.79
SHMT2-214ENST00000554604 TUSC2O75896 110 aa10.12□□□□□ -0.79
SHMT2-214ENST00000554604 OR2H2O95918 312 aa10.12□□□□□ -0.79
SHMT2-214ENST00000554604 TK1P04183 234 aa10.12□□□□□ -0.79
SHMT2-214ENST00000554604 LYL1P12980 280 aa10.12□□□□□ -0.79
SHMT2-214ENST00000554604 SAA4P35542 130 aa10.12□□□□□ -0.79
SHMT2-214ENST00000554604 FXYD4P59646 89 aa10.12□□□□□ -0.79
SHMT2-214ENST00000554604 RPL15P61313 204 aaKnown RBP10.12□□□□□ -0.79
SHMT2-214ENST00000554604 RND3P61587 244 aa10.12□□□□□ -0.79
SHMT2-214ENST00000554604 HLA-DRB3P79483 266 aa10.12□□□□□ -0.79
SHMT2-214ENST00000554604 IL15RAQ13261 267 aa10.12□□□□□ -0.79
SHMT2-214ENST00000554604 IGSF11Q5DX21 431 aa10.12□□□□□ -0.79
SHMT2-214ENST00000554604 ACOT7LQ6ZUV0 252 aa10.12□□□□□ -0.79
SHMT2-214ENST00000554604 PNKDQ8N490 385 aa10.12□□□□□ -0.79
SHMT2-214ENST00000554604 LRTM2Q8N967 370 aa10.12□□□□□ -0.79
SHMT2-214ENST00000554604 TNFRSF14Q92956 283 aa10.12□□□□□ -0.79
SHMT2-214ENST00000554604 CABLES2Q9BTV7 478 aa10.12□□□□□ -0.79
SHMT2-214ENST00000554604 ARL6Q9H0F7 186 aa10.12□□□□□ -0.79
SHMT2-214ENST00000554604 FAM234AQ9H0X4 552 aa10.12□□□□□ -0.79
SHMT2-214ENST00000554604 RDH8Q9NYR8 311 aa10.12□□□□□ -0.79
SHMT2-214ENST00000554604 GLS2Q9UI32 602 aa10.12□□□□□ -0.79
SHMT2-214ENST00000554604 WNK1Q9H4A3 2382 aa10.11□□□□□ -0.79
SHMT2-214ENST00000554604 LINC00862A6NCI5 91 aa10.11□□□□□ -0.79
SHMT2-214ENST00000554604 NPIPB11E5RHQ5 1161 aa10.11□□□□□ -0.79
SHMT2-214ENST00000554604 K7N7A8 449 aa10.11□□□□□ -0.79
SHMT2-214ENST00000554604 ADAP1O75689 374 aa10.11□□□□□ -0.79
SHMT2-214ENST00000554604 B3GALNT1O75752 331 aa10.11□□□□□ -0.79
SHMT2-214ENST00000554604 CFDP00746 253 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-214ENST00000554604 SCTP09683 121 aa10.11□□□□□ -0.79
SHMT2-214ENST00000554604 LMO1P25800 156 aa10.11□□□□□ -0.79
SHMT2-214ENST00000554604 KCNJ3P48549 501 aa10.11□□□□□ -0.79
SHMT2-214ENST00000554604 EDDM3BP56851 147 aa10.11□□□□□ -0.79
SHMT2-214ENST00000554604 COL10A1Q03692 680 aa10.11□□□□□ -0.79
SHMT2-214ENST00000554604 TMEM187Q14656 261 aa10.11□□□□□ -0.79
SHMT2-214ENST00000554604 HERPUD1Q15011 391 aa10.11□□□□□ -0.79
SHMT2-214ENST00000554604 PAN3Q58A45 887 aaKnown RBP10.11□□□□□ -0.79
SHMT2-214ENST00000554604 CLLU1Q5K131 121 aa10.11□□□□□ -0.79
SHMT2-214ENST00000554604 TMEM200BQ69YZ2 307 aa10.11□□□□□ -0.79
SHMT2-214ENST00000554604 ZNF497Q6ZNH5 498 aa10.11□□□□□ -0.79
SHMT2-214ENST00000554604 RTN4IP1Q8WWV3 396 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-214ENST00000554604 SLC2A9Q9NRM0 540 aa10.11□□□□□ -0.79
SHMT2-214ENST00000554604 C1RLQ9NZP8 487 aa10.11□□□□□ -0.79
SHMT2-214ENST00000554604 ZNRD1Q9P1U0 126 aa10.11□□□□□ -0.79
SHMT2-214ENST00000554604 MMP24Q9Y5R2 645 aa10.11□□□□□ -0.79
SHMT2-214ENST00000554604 RPS10-NUDT3A0A1W2PQS6 291 aa10.1□□□□□ -0.79
SHMT2-214ENST00000554604 HSPB6O14558 160 aa10.1□□□□□ -0.79
SHMT2-214ENST00000554604 NDUFA7O95182 113 aa10.1□□□□□ -0.79
SHMT2-214ENST00000554604 IFNA21P01568 189 aa10.1□□□□□ -0.79
SHMT2-214ENST00000554604 SRPXP78539 464 aa10.1□□□□□ -0.79
SHMT2-214ENST00000554604 LRRC37A5PQ49AS3 106 aa10.1□□□□□ -0.79
SHMT2-214ENST00000554604 MIDNQ504T8 468 aa10.1□□□□□ -0.79
SHMT2-214ENST00000554604 PRSS54Q6PEW0 395 aa10.1□□□□□ -0.79
SHMT2-214ENST00000554604 LIAT1Q6ZQX7 453 aa10.1□□□□□ -0.79
SHMT2-214ENST00000554604 SLC51BQ86UW2 128 aa10.1□□□□□ -0.79
SHMT2-214ENST00000554604 OR10C1Q96KK4 312 aa10.1□□□□□ -0.79
SHMT2-214ENST00000554604 SEBOXQ9HB31 216 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-214ENST00000554604 PRR13Q9NZ81 148 aa10.1□□□□□ -0.79
SHMT2-214ENST00000554604 MBD2Q9UBB5 411 aa10.1□□□□□ -0.79
SHMT2-214ENST00000554604 VPREB3Q9UKI3 123 aa10.1□□□□□ -0.79
SHMT2-214ENST00000554604 IGKV1-6A0A0C4DH72 117 aa10.09□□□□□ -0.79
SHMT2-214ENST00000554604 KANTRA0A1W2PQU2 76 aa10.09□□□□□ -0.79
SHMT2-214ENST00000554604 RNF222A6NCQ9 220 aa10.09□□□□□ -0.79
SHMT2-214ENST00000554604 SIRPB1O00241 398 aa10.09□□□□□ -0.79
SHMT2-214ENST00000554604 GPR31O00270 319 aa10.09□□□□□ -0.79
SHMT2-214ENST00000554604 BCL2L11O43521 198 aa10.09□□□□□ -0.79
SHMT2-214ENST00000554604 HAND1O96004 215 aa10.09□□□□□ -0.79
SHMT2-214ENST00000554604 HOXB5P09067 269 aa10.09□□□□□ -0.79
SHMT2-214ENST00000554604 OR5AC1P0C628 307 aa10.09□□□□□ -0.79
SHMT2-214ENST00000554604 PET100P0DJ07 73 aa10.09□□□□□ -0.79
SHMT2-214ENST00000554604 CCL3L1P16619 93 aa10.09□□□□□ -0.79
SHMT2-214ENST00000554604 LGALS4P56470 323 aa10.09□□□□□ -0.79
SHMT2-214ENST00000554604 ERVFRD-1P60508 538 aa10.09□□□□□ -0.79
SHMT2-214ENST00000554604 RELBQ01201 579 aa10.09□□□□□ -0.79
SHMT2-214ENST00000554604 EDDM3AQ14507 147 aa10.09□□□□□ -0.79
SHMT2-214ENST00000554604 PHLDA2Q53GA4 152 aa10.09□□□□□ -0.79
SHMT2-214ENST00000554604 DHRS7BQ6IAN0 325 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-214ENST00000554604 H1FOOQ8IZA3 346 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-214ENST00000554604 LGI3Q8N145 548 aa10.09□□□□□ -0.79
SHMT2-214ENST00000554604 OR8H3Q8N146 312 aa10.09□□□□□ -0.79
SHMT2-214ENST00000554604 ZNF565Q8N9K5 539 aa10.09□□□□□ -0.79
SHMT2-214ENST00000554604 INO80EQ8NBZ0 244 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-214ENST00000554604 OR5R1Q8NH85 324 aa10.09□□□□□ -0.79
SHMT2-214ENST00000554604 PLPPR1Q8TBJ4 325 aa10.09□□□□□ -0.79
SHMT2-214ENST00000554604 SNX22Q96L94 193 aa10.09□□□□□ -0.79
SHMT2-214ENST00000554604 RNF126Q9BV68 326 aa10.09□□□□□ -0.79
SHMT2-214ENST00000554604 MBNL3Q9NUK0 354 aaKnown RBP10.09□□□□□ -0.79
SHMT2-214ENST00000554604 MEX3AA1L020 520 aaKnown RBP10.08□□□□□ -0.8
SHMT2-214ENST00000554604 CLPSL1A2RUU4 121 aa10.08□□□□□ -0.8
SHMT2-214ENST00000554604 BET1O15155 118 aa10.08□□□□□ -0.8
SHMT2-214ENST00000554604 MPPED1O15442 326 aa10.08□□□□□ -0.8
SHMT2-214ENST00000554604 ZNF737O75373 536 aa10.08□□□□□ -0.8
SHMT2-214ENST00000554604 COX7A1P24310 79 aa10.08□□□□□ -0.8
SHMT2-214ENST00000554604 GNRHRP30968 328 aa10.08□□□□□ -0.8
SHMT2-214ENST00000554604 RAB14P61106 215 aa10.08□□□□□ -0.8
SHMT2-214ENST00000554604 ZNF273Q14593 569 aa10.08□□□□□ -0.8
SHMT2-214ENST00000554604 HMGN3Q15651 99 aa10.08□□□□□ -0.8
SHMT2-214ENST00000554604 GGNBP1Q5YKI7 109 aa10.08□□□□□ -0.8
SHMT2-214ENST00000554604 SLC35E4Q6ICL7 350 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms