RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 SLC22A7Q9Y694 548 aa2.57□□□□□ -2
CHD8-207ENST00000554384 TENM2Q9NT68 2774 aa2.56□□□□□ -2
CHD8-207ENST00000554384 NYNRINQ9P2P1 1898 aaKnown RBP2.56□□□□□ -2
CHD8-207ENST00000554384 LOC389332A0A1B0GUA5 103 aa2.56□□□□□ -2
CHD8-207ENST00000554384 A0A1W2PNN7 141 aa2.56□□□□□ -2
CHD8-207ENST00000554384 RAB19A4D1S5 217 aa2.56□□□□□ -2
CHD8-207ENST00000554384 E7EQ34 232 aa2.56□□□□□ -2
CHD8-207ENST00000554384 CD8AP01732 235 aa2.56□□□□□ -2
CHD8-207ENST00000554384 ZNF35P13682 527 aa2.56□□□□□ -2
CHD8-207ENST00000554384 LCN1P31025 176 aa2.56□□□□□ -2
CHD8-207ENST00000554384 GTF2A1P52655 376 aaPredicted RBP2.56□□□□□ -2
CHD8-207ENST00000554384 TPM4P67936 248 aa2.56□□□□□ -2
CHD8-207ENST00000554384 DCDP81605 110 aaKnown RBP2.56□□□□□ -2
CHD8-207ENST00000554384 FMODQ06828 376 aa2.56□□□□□ -2
CHD8-207ENST00000554384 STX4Q12846 297 aa2.56□□□□□ -2
CHD8-207ENST00000554384 BAMBIQ13145 260 aa2.56□□□□□ -2
CHD8-207ENST00000554384 TOMM34Q15785 309 aaPredicted RBP2.56□□□□□ -2
CHD8-207ENST00000554384 TMEM241Q24JQ0 296 aa2.56□□□□□ -2
CHD8-207ENST00000554384 TMEM249Q2WGJ8 235 aa2.56□□□□□ -2
CHD8-207ENST00000554384 ACTBL2Q562R1 376 aa2.56□□□□□ -2
CHD8-207ENST00000554384 HSP90B2PQ58FF3 399 aa2.56□□□□□ -2
CHD8-207ENST00000554384 FAM104BQ5XKR9 115 aa2.56□□□□□ -2
CHD8-207ENST00000554384 FA2HQ7L5A8 372 aa2.56□□□□□ -2
CHD8-207ENST00000554384 ADM2Q7Z4H4 148 aa2.56□□□□□ -2
CHD8-207ENST00000554384 SLC13A5Q86YT5 568 aaPredicted RBP2.56□□□□□ -2
CHD8-207ENST00000554384 ZNF555Q8NEP9 628 aa2.56□□□□□ -2
CHD8-207ENST00000554384 RNASE6Q93091 150 aaKnown RBP2.56□□□□□ -2
CHD8-207ENST00000554384 COPS4Q9BT78 406 aa2.56□□□□□ -2
CHD8-207ENST00000554384 ABCB9Q9NP78 766 aa2.56□□□□□ -2
CHD8-207ENST00000554384 ZNF492Q9P255 531 aa2.56□□□□□ -2
CHD8-207ENST00000554384 TENM3Q9P273 2699 aa2.55□□□□□ -2
CHD8-207ENST00000554384 MGAT4DA6NG13 374 aa2.55□□□□□ -2
CHD8-207ENST00000554384 OR6C70A6NIJ9 312 aa2.55□□□□□ -2
CHD8-207ENST00000554384 ISLRO14498 428 aa2.55□□□□□ -2
CHD8-207ENST00000554384 FSTL3O95633 263 aa2.55□□□□□ -2
CHD8-207ENST00000554384 CDK1P06493 297 aa2.55□□□□□ -2
CHD8-207ENST00000554384 BGNP21810 368 aa2.55□□□□□ -2
CHD8-207ENST00000554384 HLA-DMAP28067 261 aa2.55□□□□□ -2
CHD8-207ENST00000554384 CASQ1P31415 396 aa2.55□□□□□ -2
CHD8-207ENST00000554384 RHOAP61586 193 aa2.55□□□□□ -2
CHD8-207ENST00000554384 SSX1Q16384 188 aa2.55□□□□□ -2
CHD8-207ENST00000554384 CEACAM16Q2WEN9 425 aa2.55□□□□□ -2
CHD8-207ENST00000554384 DEFB110Q30KQ9 67 aa2.55□□□□□ -2
CHD8-207ENST00000554384 TRMT10CQ7L0Y3 403 aaKnown RBP2.55□□□□□ -2
CHD8-207ENST00000554384 OR4C13Q8NGP0 309 aa2.55□□□□□ -2
CHD8-207ENST00000554384 OR8K3Q8NH51 312 aa2.55□□□□□ -2
CHD8-207ENST00000554384 LGALS14Q8TCE9 139 aa2.55□□□□□ -2
CHD8-207ENST00000554384 ITFG2Q969R8 447 aa2.55□□□□□ -2
CHD8-207ENST00000554384 FMC1Q96HJ9 113 aa2.55□□□□□ -2
CHD8-207ENST00000554384 ZNF75AQ96N20 296 aa2.55□□□□□ -2
CHD8-207ENST00000554384 RILPQ96NA2 401 aa2.55□□□□□ -2
CHD8-207ENST00000554384 PEBP4Q96S96 227 aa2.55□□□□□ -2
CHD8-207ENST00000554384 VAT1Q99536 393 aa2.55□□□□□ -2
CHD8-207ENST00000554384 ZNF436Q9C0F3 470 aaPredicted RBP2.55□□□□□ -2
CHD8-207ENST00000554384 SRRQ9GZT4 340 aa2.55□□□□□ -2
CHD8-207ENST00000554384 UCK1Q9HA47 277 aa2.55□□□□□ -2
CHD8-207ENST00000554384 RMND1Q9NWS8 449 aa2.55□□□□□ -2
CHD8-207ENST00000554384 VAPAQ9P0L0 249 aa2.55□□□□□ -2
CHD8-207ENST00000554384 FAM215AQ9Y5M1 114 aa2.55□□□□□ -2
CHD8-207ENST00000554384 A0A1B0GW15 77 aa2.54□□□□□ -2
CHD8-207ENST00000554384 RBFOX3A6NFN3 312 aa2.54□□□□□ -2
CHD8-207ENST00000554384 OR5K4A6NMS3 321 aa2.54□□□□□ -2
CHD8-207ENST00000554384 OR2AT4A6NND4 320 aa2.54□□□□□ -2
CHD8-207ENST00000554384 EEF1E1-BLOC1S5C9J1V9 151 aa2.54□□□□□ -2
CHD8-207ENST00000554384 ZNF593O00488 134 aaPredicted RBP2.54□□□□□ -2
CHD8-207ENST00000554384 EEF1E1O43324 174 aaKnown RBP2.54□□□□□ -2
CHD8-207ENST00000554384 OR2B3O76000 313 aa2.54□□□□□ -2
CHD8-207ENST00000554384 KCNK2O95069 426 aa2.54□□□□□ -2
CHD8-207ENST00000554384 KLHL2O95198 593 aa2.54□□□□□ -2
CHD8-207ENST00000554384 HLA-DRAP01903 254 aa2.54□□□□□ -2
CHD8-207ENST00000554384 SERPINA7P05543 415 aa2.54□□□□□ -2
CHD8-207ENST00000554384 CCNOP22674 350 aa2.54□□□□□ -2
CHD8-207ENST00000554384 COL8A2P25067 703 aa2.54□□□□□ -2
CHD8-207ENST00000554384 SLC6A1P30531 599 aa2.54□□□□□ -2
CHD8-207ENST00000554384 SRP14P37108 136 aaKnown RBP2.54□□□□□ -2
CHD8-207ENST00000554384 RANBP1P43487 201 aa2.54□□□□□ -2
CHD8-207ENST00000554384 FLI1Q01543 452 aaPredicted RBP2.54□□□□□ -2
CHD8-207ENST00000554384 GNA12Q03113 381 aa2.54□□□□□ -2
CHD8-207ENST00000554384 TMED1Q13445 227 aa2.54□□□□□ -2
CHD8-207ENST00000554384 ZNF404Q494X3 552 aa2.54□□□□□ -2
CHD8-207ENST00000554384 LDLRAD2Q5SZI1 272 aa2.54□□□□□ -2
CHD8-207ENST00000554384 RESP18Q5W5W9 173 aa2.54□□□□□ -2
CHD8-207ENST00000554384 BRD3OSQ6XYD6 125 aa2.54□□□□□ -2
CHD8-207ENST00000554384 TMEM144Q7Z5S9 345 aa2.54□□□□□ -2
CHD8-207ENST00000554384 LINC00596Q86U02 117 aa2.54□□□□□ -2
CHD8-207ENST00000554384 CALHM3Q86XJ0 350 aa2.54□□□□□ -2
CHD8-207ENST00000554384 OR5H2Q8NGV7 314 aa2.54□□□□□ -2
CHD8-207ENST00000554384 LRRC20Q8TCA0 184 aa2.54□□□□□ -2
CHD8-207ENST00000554384 CIDECQ96AQ7 238 aaPredicted RBP2.54□□□□□ -2
CHD8-207ENST00000554384 CAPZA3Q96KX2 299 aa2.54□□□□□ -2
CHD8-207ENST00000554384 PPP1R36Q96LQ0 422 aa2.54□□□□□ -2
CHD8-207ENST00000554384 THTPAQ9BU02 230 aa2.54□□□□□ -2
CHD8-207ENST00000554384 AGPAT3Q9NRZ7 376 aa2.54□□□□□ -2
CHD8-207ENST00000554384 SLC23A2Q9UGH3 650 aa2.54□□□□□ -2
CHD8-207ENST00000554384 NXT1Q9UKK6 140 aaKnown RBP2.54□□□□□ -2
CHD8-207ENST00000554384 CHD5Q8TDI0 1954 aa2.53□□□□□ -2
CHD8-207ENST00000554384 IGKV1OR2-108A0A075B7D4 117 aa2.53□□□□□ -2
CHD8-207ENST00000554384 DEFB108AA8MXU0 73 aa2.53□□□□□ -2
CHD8-207ENST00000554384 hCG_2039718K7EN88 272 aa2.53□□□□□ -2
CHD8-207ENST00000554384 PSMD11O00231 422 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms