RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 TMEM219Q86XT9 240 aa11.85□□□□□ -0.51
MTHFD1-204ENST00000553405 BVESQ8NE79 360 aa11.85□□□□□ -0.51
MTHFD1-204ENST00000553405 TERB2Q8NHR7 220 aa11.85□□□□□ -0.51
MTHFD1-204ENST00000553405 ZFAND2BQ8WV99 257 aa11.85□□□□□ -0.51
MTHFD1-204ENST00000553405 DEDD2Q8WXF8 326 aa11.85□□□□□ -0.51
MTHFD1-204ENST00000553405 RSRP1Q9BUV0 290 aa11.85□□□□□ -0.51
MTHFD1-204ENST00000553405 ABCB10Q9NRK6 738 aa11.85□□□□□ -0.51
MTHFD1-204ENST00000553405 TNFRSF19Q9NS68 423 aa11.85□□□□□ -0.51
MTHFD1-204ENST00000553405 PLA2G10O15496 165 aa11.84□□□□□ -0.51
MTHFD1-204ENST00000553405 OR2F2O95006 317 aa11.84□□□□□ -0.51
MTHFD1-204ENST00000553405 IGKV1-16P04430 117 aa11.84□□□□□ -0.51
MTHFD1-204ENST00000553405 BTCP35070 178 aa11.84□□□□□ -0.51
MTHFD1-204ENST00000553405 ARHGDIBP52566 201 aa11.84□□□□□ -0.51
MTHFD1-204ENST00000553405 RIPPLY3P57055 190 aa11.84□□□□□ -0.51
MTHFD1-204ENST00000553405 TSPAN5P62079 268 aa11.84□□□□□ -0.51
MTHFD1-204ENST00000553405 IFITM3Q01628 133 aa11.84□□□□□ -0.51
MTHFD1-204ENST00000553405 KRTAP24-1Q3LI83 254 aa11.84□□□□□ -0.51
MTHFD1-204ENST00000553405 LIAT1Q6ZQX7 453 aa11.84□□□□□ -0.51
MTHFD1-204ENST00000553405 TOMM5Q8N4H5 51 aa11.84□□□□□ -0.51
MTHFD1-204ENST00000553405 ZBTB34Q8NCN2 500 aa11.84□□□□□ -0.51
MTHFD1-204ENST00000553405 OR51S1Q8NGJ8 323 aa11.84□□□□□ -0.51
MTHFD1-204ENST00000553405 CAPSLQ8WWF8 208 aa11.84□□□□□ -0.51
MTHFD1-204ENST00000553405 TAF15Q92804 592 aaKnown RBP eCLIP11.84□□□□□ -0.51
MTHFD1-204ENST00000553405 RBM14Q96PK6 669 aaKnown RBP11.84□□□□□ -0.51
MTHFD1-204ENST00000553405 CCDC32Q9BV29 185 aa11.84□□□□□ -0.51
MTHFD1-204ENST00000553405 RBM7Q9Y580 266 aaKnown RBP11.84□□□□□ -0.51
MTHFD1-204ENST00000553405 FAM181BA6NEQ2 426 aa11.83□□□□□ -0.52
MTHFD1-204ENST00000553405 IFNA6P05013 189 aa11.83□□□□□ -0.52
MTHFD1-204ENST00000553405 FAM106CPP0CH98 169 aa11.83□□□□□ -0.52
MTHFD1-204ENST00000553405 THBS3P49746 956 aa11.83□□□□□ -0.52
MTHFD1-204ENST00000553405 AKR1E2Q96JD6 320 aa11.83□□□□□ -0.52
MTHFD1-204ENST00000553405 HSD17B10Q99714 261 aaKnown RBP11.83□□□□□ -0.52
MTHFD1-204ENST00000553405 BTBD17A6NE02 478 aa11.82□□□□□ -0.52
MTHFD1-204ENST00000553405 DISC1C4P0D8 188 aa11.82□□□□□ -0.52
MTHFD1-204ENST00000553405 TRIM77I1YAP6 450 aa11.82□□□□□ -0.52
MTHFD1-204ENST00000553405 PGLYRP1O75594 196 aaPredicted RBP11.82□□□□□ -0.52
MTHFD1-204ENST00000553405 MOSP00540 346 aa11.82□□□□□ -0.52
MTHFD1-204ENST00000553405 MC5RP33032 325 aa11.82□□□□□ -0.52
MTHFD1-204ENST00000553405 F2RL1P55085 397 aa11.82□□□□□ -0.52
MTHFD1-204ENST00000553405 AP3S2P59780 193 aa11.82□□□□□ -0.52
MTHFD1-204ENST00000553405 RPL15P61313 204 aaKnown RBP11.82□□□□□ -0.52
MTHFD1-204ENST00000553405 ZNF846Q147U1 533 aa11.82□□□□□ -0.52
MTHFD1-204ENST00000553405 ZNF66Q6ZN08 573 aa11.82□□□□□ -0.52
MTHFD1-204ENST00000553405 C16orf82Q7Z2V1 217 aa11.82□□□□□ -0.52
MTHFD1-204ENST00000553405 SLC38A6Q8IZM9 456 aa11.82□□□□□ -0.52
MTHFD1-204ENST00000553405 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.82□□□□□ -0.52
MTHFD1-204ENST00000553405 OR2T10Q8NGZ9 312 aa11.82□□□□□ -0.52
MTHFD1-204ENST00000553405 ADTRPQ96IZ2 230 aa11.82□□□□□ -0.52
MTHFD1-204ENST00000553405 PRRT1Q99946 306 aa11.82□□□□□ -0.52
MTHFD1-204ENST00000553405 SLC25A33Q9BSK2 321 aa11.82□□□□□ -0.52
MTHFD1-204ENST00000553405 WDR12Q9GZL7 423 aaKnown RBP11.82□□□□□ -0.52
MTHFD1-204ENST00000553405 C1RLQ9NZP8 487 aa11.82□□□□□ -0.52
MTHFD1-204ENST00000553405 PITPNC1Q9UKF7 332 aa11.82□□□□□ -0.52
MTHFD1-204ENST00000553405 WASHC3Q9Y3C0 194 aa11.82□□□□□ -0.52
MTHFD1-204ENST00000553405 GPR31O00270 319 aa11.81□□□□□ -0.52
MTHFD1-204ENST00000553405 TNFSF12O43508 249 aa11.81□□□□□ -0.52
MTHFD1-204ENST00000553405 IGLV2-23P01705 113 aa11.81□□□□□ -0.52
MTHFD1-204ENST00000553405 VSIG10L2P0DP72 767 aa11.81□□□□□ -0.52
MTHFD1-204ENST00000553405 TMEM11P17152 192 aa11.81□□□□□ -0.52
MTHFD1-204ENST00000553405 CNTFRP26992 372 aa11.81□□□□□ -0.52
MTHFD1-204ENST00000553405 RND3P61587 244 aa11.81□□□□□ -0.52
MTHFD1-204ENST00000553405 HNF4GQ14541 408 aa11.81□□□□□ -0.52
MTHFD1-204ENST00000553405 TMEM177Q53S58 311 aa11.81□□□□□ -0.52
MTHFD1-204ENST00000553405 TRIQKQ629K1 86 aa11.81□□□□□ -0.52
MTHFD1-204ENST00000553405 IDO2Q6ZQW0 420 aa11.81□□□□□ -0.52
MTHFD1-204ENST00000553405 Q6ZS46 218 aa11.81□□□□□ -0.52
MTHFD1-204ENST00000553405 PDPNQ86YL7 162 aa11.81□□□□□ -0.52
MTHFD1-204ENST00000553405 FAM71E2Q8N5Q1 922 aa11.81□□□□□ -0.52
MTHFD1-204ENST00000553405 Q8N9W7 124 aa11.81□□□□□ -0.52
MTHFD1-204ENST00000553405 NPBQ8NG41 125 aa11.81□□□□□ -0.52
MTHFD1-204ENST00000553405 MARCH1Q8TCQ1 289 aa11.81□□□□□ -0.52
MTHFD1-204ENST00000553405 RTBDNQ9BSG5 229 aaPredicted RBP11.81□□□□□ -0.52
MTHFD1-204ENST00000553405 C5orf66Q9H5L9 145 aa11.81□□□□□ -0.52
MTHFD1-204ENST00000553405 GPR132Q9UNW8 380 aa11.81□□□□□ -0.52
MTHFD1-204ENST00000553405 STAB1Q9NY15 2570 aa11.8□□□□□ -0.52
MTHFD1-204ENST00000553405 SRRM4A7MD48 611 aaKnown RBP11.8□□□□□ -0.52
MTHFD1-204ENST00000553405 FGF16O43320 207 aa11.8□□□□□ -0.52
MTHFD1-204ENST00000553405 TSPAN9O75954 239 aa11.8□□□□□ -0.52
MTHFD1-204ENST00000553405 NDUFA3O95167 84 aa11.8□□□□□ -0.52
MTHFD1-204ENST00000553405 PI3P19957 117 aa11.8□□□□□ -0.52
MTHFD1-204ENST00000553405 BLCAPP62952 87 aa11.8□□□□□ -0.52
MTHFD1-204ENST00000553405 TAGLNQ01995 201 aaKnown RBP11.8□□□□□ -0.52
MTHFD1-204ENST00000553405 SURF2Q15527 256 aaPredicted RBP11.8□□□□□ -0.52
MTHFD1-204ENST00000553405 SCGB2B2Q4G0G5 96 aa11.8□□□□□ -0.52
MTHFD1-204ENST00000553405 ZNF57Q68EA5 555 aaPredicted RBP11.8□□□□□ -0.52
MTHFD1-204ENST00000553405 C11orf88Q6PI97 169 aa11.8□□□□□ -0.52
MTHFD1-204ENST00000553405 Q6ZSV7 163 aa11.8□□□□□ -0.52
MTHFD1-204ENST00000553405 KCTD9Q7L273 389 aa11.8□□□□□ -0.52
MTHFD1-204ENST00000553405 Q8N2B8 174 aa11.8□□□□□ -0.52
MTHFD1-204ENST00000553405 C5orf56Q8N8D9 126 aa11.8□□□□□ -0.52
MTHFD1-204ENST00000553405 ZNF486Q96H40 463 aaPredicted RBP11.8□□□□□ -0.52
MTHFD1-204ENST00000553405 ZNF702PQ9H963 129 aa11.8□□□□□ -0.52
MTHFD1-204ENST00000553405 SLC2A9Q9NRM0 540 aa11.8□□□□□ -0.52
MTHFD1-204ENST00000553405 SLC35D1Q9NTN3 355 aa11.8□□□□□ -0.52
MTHFD1-204ENST00000553405 TBC1D24Q9ULP9 559 aa11.8□□□□□ -0.52
MTHFD1-204ENST00000553405 VSIG4Q9Y279 399 aa11.8□□□□□ -0.52
MTHFD1-204ENST00000553405 RBFOX2O43251 390 aaKnown RBP eCLIP11.79□□□□□ -0.52
MTHFD1-204ENST00000553405 RAMP3O60896 148 aa11.79□□□□□ -0.52
MTHFD1-204ENST00000553405 UPK1BO75841 260 aa11.79□□□□□ -0.52
MTHFD1-204ENST00000553405 NDUFA7O95182 113 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms