RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 GPR84Q9NQS5 396 aa4.63□□□□□ -1.67
VPS29-210ENST00000552130 ZNF706Q9Y5V0 76 aaPredicted RBP4.63□□□□□ -1.67
VPS29-210ENST00000552130 ITGB4P16144 1822 aa4.62□□□□□ -1.67
VPS29-210ENST00000552130 DENND4BO75064 1496 aaPredicted RBP4.62□□□□□ -1.67
VPS29-210ENST00000552130 A2MP01023 1474 aa4.62□□□□□ -1.67
VPS29-210ENST00000552130 CACNA1SQ13698 1873 aa4.62□□□□□ -1.67
VPS29-210ENST00000552130 NAV1Q8NEY1 1877 aa4.62□□□□□ -1.67
VPS29-210ENST00000552130 PVALEFA0A1B0GWK0 134 aa4.62□□□□□ -1.67
VPS29-210ENST00000552130 KRBOX1C9JBD0 128 aa4.62□□□□□ -1.67
VPS29-210ENST00000552130 KRTAP4-16G5E9R7 235 aaPredicted RBP4.62□□□□□ -1.67
VPS29-210ENST00000552130 ZNF354AO60765 605 aaPredicted RBP4.62□□□□□ -1.67
VPS29-210ENST00000552130 DEDDO75618 318 aa4.62□□□□□ -1.67
VPS29-210ENST00000552130 APOMO95445 188 aa4.62□□□□□ -1.67
VPS29-210ENST00000552130 HLA-DPB1P04440 258 aa4.62□□□□□ -1.67
VPS29-210ENST00000552130 PATE4P0C8F1 98 aa4.62□□□□□ -1.67
VPS29-210ENST00000552130 PSG2P11465 335 aa4.62□□□□□ -1.67
VPS29-210ENST00000552130 PPIBP23284 216 aaKnown RBP4.62□□□□□ -1.67
VPS29-210ENST00000552130 IMPA1P29218 277 aa4.62□□□□□ -1.67
VPS29-210ENST00000552130 CMPK1P30085 196 aa4.62□□□□□ -1.67
VPS29-210ENST00000552130 OR10J1P30954 320 aa4.62□□□□□ -1.67
VPS29-210ENST00000552130 PPP1CCP36873 323 aaKnown RBP4.62□□□□□ -1.67
VPS29-210ENST00000552130 ATP5G3P48201 142 aa4.62□□□□□ -1.67
VPS29-210ENST00000552130 NEDD8Q15843 81 aa4.62□□□□□ -1.67
VPS29-210ENST00000552130 RSPO1Q2MKA7 263 aaPredicted RBP4.62□□□□□ -1.67
VPS29-210ENST00000552130 MORN2Q502X0 79 aa4.62□□□□□ -1.67
VPS29-210ENST00000552130 HAGHLQ6PII5 290 aaPredicted RBP4.62□□□□□ -1.67
VPS29-210ENST00000552130 C12orf45Q8N5I9 185 aaPredicted RBP4.62□□□□□ -1.67
VPS29-210ENST00000552130 ADAT3Q96EY9 351 aaPredicted RBP4.62□□□□□ -1.67
VPS29-210ENST00000552130 C18orf15Q96N68 181 aa4.62□□□□□ -1.67
VPS29-210ENST00000552130 OR2M2Q96R28 347 aa4.62□□□□□ -1.67
VPS29-210ENST00000552130 C6orf106Q9H6K1 298 aaPredicted RBP4.62□□□□□ -1.67
VPS29-210ENST00000552130 CXorf21Q9HAI6 301 aa4.62□□□□□ -1.67
VPS29-210ENST00000552130 CACYBPQ9HB71 228 aaKnown RBP4.62□□□□□ -1.67
VPS29-210ENST00000552130 PDFQ9HBH1 243 aa4.62□□□□□ -1.67
VPS29-210ENST00000552130 CTSZQ9UBR2 303 aa4.62□□□□□ -1.67
VPS29-210ENST00000552130 KMT2EQ8IZD2 1858 aa4.62□□□□□ -1.67
VPS29-210ENST00000552130 YLPM1P49750 1951 aaKnown RBP4.62□□□□□ -1.67
VPS29-210ENST00000552130 TRIP12Q14669 1992 aaPredicted RBP4.62□□□□□ -1.67
VPS29-210ENST00000552130 ZCCHC11Q5TAX3 1644 aaKnown RBP4.61□□□□□ -1.67
VPS29-210ENST00000552130 IGHV1-69-2A0A0G2JMI3 117 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 B4DEV8 164 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 M0R381 172 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 CD5LO43866 347 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 GABARAPO95166 117 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 IFNA7P01567 189 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 SMIM17P0DL12 118 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 RPS4Y1P22090 263 aaKnown RBP4.61□□□□□ -1.67
VPS29-210ENST00000552130 INPP1P49441 399 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 GABARAPL2P60520 117 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 PPP1CAP62136 330 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 RAP1AP62834 184 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 PSG9Q00887 426 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 HIST1H1AQ02539 215 aaPredicted RBP4.61□□□□□ -1.67
VPS29-210ENST00000552130 CAV1Q03135 178 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 PLCXD2Q0VAA5 305 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 ZNF497Q6ZNH5 498 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 KRTCAP2Q8N6L1 136 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 TMEM229BQ8NBD8 167 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 NUP35Q8NFH5 326 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 OR13C8Q8NGS7 320 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 SLC25A40Q8TBP6 338 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 IGF2BP2-AS1Q96M15 143 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 SOSTQ9BQB4 213 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 MED28Q9H204 178 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 OR2D2Q9H210 308 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 LINC00597Q9H2U6 94 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 KCNIP2Q9NS61 270 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 RPS6KB2Q9UBS0 482 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 COQ4Q9Y3A0 265 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 MED23Q9ULK4 1368 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 THSD7BQ9C0I4 1608 aa4.61□□□□□ -1.67
VPS29-210ENST00000552130 SETD1AO15047 1707 aaKnown RBP4.6□□□□□ -1.67
VPS29-210ENST00000552130 TRBV19A0A075B6N1 114 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 IGHV3-74A0A0B4J1X5 117 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 TRAV4A0A0B4J268 109 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 A0A0J9YXY3 114 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 DUXBA0A1W2PPF3 345 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 CLDN25C9JDP6 229 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 GSTZ1O43708 216 aaPredicted RBP4.6□□□□□ -1.67
VPS29-210ENST00000552130 IGLV2-8P01709 118 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 HLA-DQB2P05538 268 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 SRIP30626 198 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 EVX1P49640 407 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 VEGFCP49767 419 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 GNB1P62873 340 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 SELENOWP63302 87 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 GNA12Q03113 381 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 LOXL1Q08397 574 aaPredicted RBP4.6□□□□□ -1.67
VPS29-210ENST00000552130 MMDQ15546 238 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 CST6Q15828 149 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 TIMM50Q3ZCQ8 353 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 TNFAIP8L3Q5GJ75 292 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 UNQ9165/PRO28630Q6UXU0 137 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 MARCH3Q86UD3 253 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 ZNF429Q86V71 674 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 ZNF433Q8N7K0 673 aaPredicted RBP4.6□□□□□ -1.67
VPS29-210ENST00000552130 FAM104AQ969W3 186 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 PHYHIPLQ96FC7 376 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 NARS2Q96I59 477 aaKnown RBP4.6□□□□□ -1.67
VPS29-210ENST00000552130 ABHD14BQ96IU4 210 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms