RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 IGKV1D-33P01593 117 aa11.8□□□□□ -0.52
CALCOCO1-218ENST00000550804 IGKV1-33P01594 117 aa11.8□□□□□ -0.52
CALCOCO1-218ENST00000550804 CRYABP02511 175 aaKnown RBP11.8□□□□□ -0.52
CALCOCO1-218ENST00000550804 P0C879 139 aa11.8□□□□□ -0.52
CALCOCO1-218ENST00000550804 SELLP14151 372 aa11.8□□□□□ -0.52
CALCOCO1-218ENST00000550804 ZNF134P52741 427 aa11.8□□□□□ -0.52
CALCOCO1-218ENST00000550804 P2RY6Q15077 328 aa11.8□□□□□ -0.52
CALCOCO1-218ENST00000550804 NCR3LG1Q68D85 454 aa11.8□□□□□ -0.52
CALCOCO1-218ENST00000550804 ZNF429Q86V71 674 aa11.8□□□□□ -0.52
CALCOCO1-218ENST00000550804 WDR61Q9GZS3 305 aaKnown RBP11.8□□□□□ -0.52
CALCOCO1-218ENST00000550804 FAM234AQ9H0X4 552 aa11.8□□□□□ -0.52
CALCOCO1-218ENST00000550804 RAB5AP20339 215 aa11.8□□□□□ -0.52
CALCOCO1-218ENST00000550804 ZNF506Q5JVG8 444 aa11.8□□□□□ -0.52
CALCOCO1-218ENST00000550804 ZNF343Q6P1L6 599 aa11.8□□□□□ -0.52
CALCOCO1-218ENST00000550804 VKORC1L1Q8N0U8 176 aa11.8□□□□□ -0.52
CALCOCO1-218ENST00000550804 GCSAMQ8N6F7 178 aa11.8□□□□□ -0.52
CALCOCO1-218ENST00000550804 LEAP2Q969E1 77 aa11.8□□□□□ -0.52
CALCOCO1-218ENST00000550804 RCC1LQ96I51 464 aaKnown RBP11.8□□□□□ -0.52
CALCOCO1-218ENST00000550804 OR2V2Q96R30 315 aa11.8□□□□□ -0.52
CALCOCO1-218ENST00000550804 HSPB7Q9UBY9 170 aa11.8□□□□□ -0.52
CALCOCO1-218ENST00000550804 TP53TG5Q9Y2B4 290 aa11.8□□□□□ -0.52
CALCOCO1-218ENST00000550804 URGCP-MRPS24S4R325 110 aa11.8□□□□□ -0.52
CALCOCO1-218ENST00000550804 PLCE1Q9P212 2302 aa11.8□□□□□ -0.52
CALCOCO1-218ENST00000550804 BTBD17A6NE02 478 aa11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 RNF212BA8MTL3 300 aa11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 DEFA4P12838 97 aa11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 FOLR2P14207 255 aa11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 TAGLN2P37802 199 aaKnown RBP11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 HBG1P69891 147 aa11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 HBG2P69892 147 aa11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 DLK1P80370 383 aa11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 SLC38A11Q08AI6 406 aa11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 RHEBQ15382 184 aa11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 DUX4L9Q6RFH8 374 aaPredicted RBP11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 TMEM14EPQ6UXP3 125 aa11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 C1orf229Q6ZS94 237 aaPredicted RBP11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 SSX9Q7RTT3 188 aa11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 MOGAT3Q86VF5 341 aa11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 RPP25LQ8N5L8 163 aaKnown RBP11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 TUBA4BQ9H853 241 aa11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 LINC00587B1AMM8 73 aa11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 K7ENP7 123 aa11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 IFNL4K9M1U5 179 aa11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 OR2C1O95371 312 aa11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 PAX6P26367 422 aa11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 FAM27E3Q08E93 113 aa11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 TBR1Q16650 682 aa11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 TAF15Q92804 592 aaKnown RBP eCLIP11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 LURAP1Q96LR2 239 aa11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 COA4Q9NYJ1 87 aa11.79□□□□□ -0.52
CALCOCO1-218ENST00000550804 CHD3Q12873 2000 aaKnown RBP11.78□□□□□ -0.52
CALCOCO1-218ENST00000550804 TRAV20A0A0B4J274 112 aa11.78□□□□□ -0.52
CALCOCO1-218ENST00000550804 C1orf196B1AJZ1 125 aa11.78□□□□□ -0.52
CALCOCO1-218ENST00000550804 PPIHO43447 177 aaKnown RBP11.78□□□□□ -0.52
CALCOCO1-218ENST00000550804 HSPB1P04792 205 aaKnown RBP11.78□□□□□ -0.52
CALCOCO1-218ENST00000550804 AGAP20933 346 aa11.78□□□□□ -0.52
CALCOCO1-218ENST00000550804 EDDM3BP56851 147 aa11.78□□□□□ -0.52
CALCOCO1-218ENST00000550804 RAB2AP61019 212 aa11.78□□□□□ -0.52
CALCOCO1-218ENST00000550804 RAB5BP61020 215 aa11.78□□□□□ -0.52
CALCOCO1-218ENST00000550804 RAB11AP62491 216 aa11.78□□□□□ -0.52
CALCOCO1-218ENST00000550804 RPL39P5Q59GN2 51 aa11.78□□□□□ -0.52
CALCOCO1-218ENST00000550804 ZNF787Q6DD87 383 aa11.78□□□□□ -0.52
CALCOCO1-218ENST00000550804 TGIF2LYQ8IUE0 185 aa11.78□□□□□ -0.52
CALCOCO1-218ENST00000550804 ZBTB34Q8NCN2 500 aa11.78□□□□□ -0.52
CALCOCO1-218ENST00000550804 TMPRSS5Q9H3S3 457 aa11.78□□□□□ -0.52
CALCOCO1-218ENST00000550804 SMDT1Q9H4I9 107 aa11.78□□□□□ -0.52
CALCOCO1-218ENST00000550804 PTPRQQ9UMZ3 2332 aa11.78□□□□□ -0.52
CALCOCO1-218ENST00000550804 SRRM5B3KS81 715 aa11.77□□□□□ -0.52
CALCOCO1-218ENST00000550804 EIF2S3LQ2VIR3 472 aaKnown RBP11.77□□□□□ -0.52
CALCOCO1-218ENST00000550804 KRTCAP3Q53RY4 240 aa11.77□□□□□ -0.52
CALCOCO1-218ENST00000550804 H2BFWTQ7Z2G1 175 aa11.77□□□□□ -0.52
CALCOCO1-218ENST00000550804 KDF1Q8NAX2 398 aaPredicted RBP11.77□□□□□ -0.52
CALCOCO1-218ENST00000550804 GNG12Q9UBI6 72 aa11.77□□□□□ -0.52
CALCOCO1-218ENST00000550804 IGF2RP11717 2491 aa11.77□□□□□ -0.52
CALCOCO1-218ENST00000550804 PIGBOS1A0A0B4J2F0 54 aa11.77□□□□□ -0.53
CALCOCO1-218ENST00000550804 LOC102723971A0A1B0GUV8 181 aa11.77□□□□□ -0.53
CALCOCO1-218ENST00000550804 MARCH11A6NNE9 402 aa11.77□□□□□ -0.53
CALCOCO1-218ENST00000550804 PMS2P5A8MQ11 134 aa11.77□□□□□ -0.53
CALCOCO1-218ENST00000550804 SPINT2O43291 252 aa11.77□□□□□ -0.53
CALCOCO1-218ENST00000550804 FCGR3BO75015 233 aa11.77□□□□□ -0.53
CALCOCO1-218ENST00000550804 CATR1Q13166 79 aa11.77□□□□□ -0.53
CALCOCO1-218ENST00000550804 DTD1Q8TEA8 209 aa11.77□□□□□ -0.53
CALCOCO1-218ENST00000550804 YPEL4Q96NS1 127 aa11.77□□□□□ -0.53
CALCOCO1-218ENST00000550804 TOLLIPQ9H0E2 274 aa11.77□□□□□ -0.53
CALCOCO1-218ENST00000550804 TRAV1-1A0A0B4J248 108 aa11.76□□□□□ -0.53
CALCOCO1-218ENST00000550804 A0A1B0GWJ7 208 aa11.76□□□□□ -0.53
CALCOCO1-218ENST00000550804 CLDN14O95500 239 aa11.76□□□□□ -0.53
CALCOCO1-218ENST00000550804 OR9G9P0C7N8 305 aa11.76□□□□□ -0.53
CALCOCO1-218ENST00000550804 MSMO1Q15800 293 aa11.76□□□□□ -0.53
CALCOCO1-218ENST00000550804 RNF212Q495C1 297 aa11.76□□□□□ -0.53
CALCOCO1-218ENST00000550804 MORN2Q502X0 79 aa11.76□□□□□ -0.53
CALCOCO1-218ENST00000550804 KHDC3LQ587J8 217 aa11.76□□□□□ -0.53
CALCOCO1-218ENST00000550804 C1orf185Q5T7R7 199 aa11.76□□□□□ -0.53
CALCOCO1-218ENST00000550804 ACSM6Q6P461 480 aa11.76□□□□□ -0.53
CALCOCO1-218ENST00000550804 DPPA3Q6W0C5 159 aa11.76□□□□□ -0.53
CALCOCO1-218ENST00000550804 RBMS3Q6XE24 437 aaKnown RBP11.76□□□□□ -0.53
CALCOCO1-218ENST00000550804 ZNF561Q8N587 486 aa11.76□□□□□ -0.53
CALCOCO1-218ENST00000550804 Q8NA96 180 aa11.76□□□□□ -0.53
CALCOCO1-218ENST00000550804 DEFB108BQ8NET1 73 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms