RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 ARPC1BO15143 372 aaKnown RBP13.39□□□□□ -0.27
CHMP1A-205ENST00000548650 DENRO43583 198 aaKnown RBP13.39□□□□□ -0.27
CHMP1A-205ENST00000548650 SLC25A17O43808 307 aa13.39□□□□□ -0.27
CHMP1A-205ENST00000548650 OR8U9P0C7N5 309 aa13.39□□□□□ -0.27
CHMP1A-205ENST00000548650 RPS16P62249 146 aaKnown RBP13.39□□□□□ -0.27
CHMP1A-205ENST00000548650 C2orf76Q3KRA6 126 aa13.39□□□□□ -0.27
CHMP1A-205ENST00000548650 HES5Q5TA89 166 aa13.39□□□□□ -0.27
CHMP1A-205ENST00000548650 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.39□□□□□ -0.27
CHMP1A-205ENST00000548650 OR4A4PQ8NGN8 299 aa13.39□□□□□ -0.27
CHMP1A-205ENST00000548650 GRPEL2Q8TAA5 225 aa13.39□□□□□ -0.27
CHMP1A-205ENST00000548650 MS4A10Q96PG2 267 aa13.39□□□□□ -0.27
CHMP1A-205ENST00000548650 CCDC90BQ9GZT6 254 aa13.39□□□□□ -0.27
CHMP1A-205ENST00000548650 SLA2Q9H6Q3 261 aa13.39□□□□□ -0.27
CHMP1A-205ENST00000548650 V9GY05 133 aa13.39□□□□□ -0.27
CHMP1A-205ENST00000548650 FABP7O15540 132 aa13.38□□□□□ -0.27
CHMP1A-205ENST00000548650 IGLV2-23P01705 113 aa13.38□□□□□ -0.27
CHMP1A-205ENST00000548650 FCGR3AP08637 254 aa13.38□□□□□ -0.27
CHMP1A-205ENST00000548650 CD3GP09693 182 aa13.38□□□□□ -0.27
CHMP1A-205ENST00000548650 SERPINB10P48595 397 aa13.38□□□□□ -0.27
CHMP1A-205ENST00000548650 TBCEQ15813 527 aaPredicted RBP13.38□□□□□ -0.27
CHMP1A-205ENST00000548650 SSX1Q16384 188 aa13.38□□□□□ -0.27
CHMP1A-205ENST00000548650 MOGAT2Q3SYC2 334 aa13.38□□□□□ -0.27
CHMP1A-205ENST00000548650 OR6Q1Q8NGQ2 317 aa13.38□□□□□ -0.27
CHMP1A-205ENST00000548650 C5orf30Q96GV9 206 aa13.38□□□□□ -0.27
CHMP1A-205ENST00000548650 RHOVQ96L33 236 aa13.38□□□□□ -0.27
CHMP1A-205ENST00000548650 OR2D2Q9H210 308 aa13.38□□□□□ -0.27
CHMP1A-205ENST00000548650 VCX3BQ9H321 246 aa13.38□□□□□ -0.27
CHMP1A-205ENST00000548650 ACOT13Q9NPJ3 140 aa13.38□□□□□ -0.27
CHMP1A-205ENST00000548650 SLC35D1Q9NTN3 355 aa13.38□□□□□ -0.27
CHMP1A-205ENST00000548650 SHISA3A0PJX4 238 aa13.37□□□□□ -0.27
CHMP1A-205ENST00000548650 MFNGO00587 321 aa13.37□□□□□ -0.27
CHMP1A-205ENST00000548650 ATP6V1G2O95670 118 aa13.37□□□□□ -0.27
CHMP1A-205ENST00000548650 TRGV3P03979 118 aa13.37□□□□□ -0.27
CHMP1A-205ENST00000548650 HSPB1P04792 205 aaKnown RBP13.37□□□□□ -0.27
CHMP1A-205ENST00000548650 GP9P14770 177 aa13.37□□□□□ -0.27
CHMP1A-205ENST00000548650 OR10A3P58181 314 aa13.37□□□□□ -0.27
CHMP1A-205ENST00000548650 PITPNAQ00169 270 aa13.37□□□□□ -0.27
CHMP1A-205ENST00000548650 FXYD3Q14802 87 aa13.37□□□□□ -0.27
CHMP1A-205ENST00000548650 IGSF11Q5DX21 431 aa13.37□□□□□ -0.27
CHMP1A-205ENST00000548650 IZUMO2Q6UXV1 221 aa13.37□□□□□ -0.27
CHMP1A-205ENST00000548650 SBSPONQ8IVN8 264 aa13.37□□□□□ -0.27
CHMP1A-205ENST00000548650 POC5Q8NA72 575 aa13.37□□□□□ -0.27
CHMP1A-205ENST00000548650 FLYWCH2Q96CP2 140 aaKnown RBP13.37□□□□□ -0.27
CHMP1A-205ENST00000548650 RAB3CQ96E17 227 aa13.37□□□□□ -0.27
CHMP1A-205ENST00000548650 TNCP24821 2201 aa13.36□□□□□ -0.27
CHMP1A-205ENST00000548650 TRIM64CA6NLI5 447 aa13.36□□□□□ -0.27
CHMP1A-205ENST00000548650 H3BUA1 57 aa13.36□□□□□ -0.27
CHMP1A-205ENST00000548650 BET1O15155 118 aa13.36□□□□□ -0.27
CHMP1A-205ENST00000548650 DIRAS3O95661 229 aa13.36□□□□□ -0.27
CHMP1A-205ENST00000548650 CRYGBP07316 175 aa13.36□□□□□ -0.27
CHMP1A-205ENST00000548650 FRMD6-AS1P0C7T7 363 aa13.36□□□□□ -0.27
CHMP1A-205ENST00000548650 PJVKQ0ZLH3 352 aa13.36□□□□□ -0.27
CHMP1A-205ENST00000548650 HAPLN4Q86UW8 402 aa13.36□□□□□ -0.27
CHMP1A-205ENST00000548650 SDHAF2Q9NX18 166 aa13.36□□□□□ -0.27
CHMP1A-205ENST00000548650 RAB22AQ9UL26 194 aa13.36□□□□□ -0.27
CHMP1A-205ENST00000548650 TRBV6-7A0A0A0MS04 114 aa13.35□□□□□ -0.27
CHMP1A-205ENST00000548650 RAB27BO00194 218 aa13.35□□□□□ -0.27
CHMP1A-205ENST00000548650 GSTT2P0CG29 244 aa13.35□□□□□ -0.27
CHMP1A-205ENST00000548650 GSTT2BP0CG30 244 aa13.35□□□□□ -0.27
CHMP1A-205ENST00000548650 HIST1H1DP16402 221 aaKnown RBP13.35□□□□□ -0.27
CHMP1A-205ENST00000548650 CD40LGP29965 261 aa13.35□□□□□ -0.27
CHMP1A-205ENST00000548650 PSMD7P51665 324 aa13.35□□□□□ -0.27
CHMP1A-205ENST00000548650 MRPS15P82914 257 aaKnown RBP13.35□□□□□ -0.27
CHMP1A-205ENST00000548650 ZNF367Q7RTV3 350 aa13.35□□□□□ -0.27
CHMP1A-205ENST00000548650 OVCH2Q7RTZ1 564 aa13.35□□□□□ -0.27
CHMP1A-205ENST00000548650 OR10R2Q8NGX6 335 aa13.35□□□□□ -0.27
CHMP1A-205ENST00000548650 MAFIPQ8WZ33 124 aa13.35□□□□□ -0.27
CHMP1A-205ENST00000548650 HARBI1Q96MB7 349 aa13.35□□□□□ -0.27
CHMP1A-205ENST00000548650 RCHY1Q96PM5 261 aa13.35□□□□□ -0.27
CHMP1A-205ENST00000548650 NDUFB11Q9NX14 153 aa13.35□□□□□ -0.27
CHMP1A-205ENST00000548650 TRAV1-2A0A0B4J238 106 aa13.34□□□□□ -0.27
CHMP1A-205ENST00000548650 IFITM5A6NNB3 132 aa13.34□□□□□ -0.27
CHMP1A-205ENST00000548650 GNB3P16520 340 aa13.34□□□□□ -0.27
CHMP1A-205ENST00000548650 RANBP1P43487 201 aa13.34□□□□□ -0.27
CHMP1A-205ENST00000548650 DEFA5Q01523 94 aa13.34□□□□□ -0.27
CHMP1A-205ENST00000548650 OR10J5Q8NHC4 309 aa13.34□□□□□ -0.27
CHMP1A-205ENST00000548650 OR4C12Q96R67 309 aa13.34□□□□□ -0.27
CHMP1A-205ENST00000548650 ZNF230Q9UIE0 474 aaPredicted RBP13.34□□□□□ -0.27
CHMP1A-205ENST00000548650 DYNC2H1Q8NCM8 4307 aaKnown RBP13.33□□□□□ -0.27
CHMP1A-205ENST00000548650 A0A0B4J203 849 aa13.33□□□□□ -0.28
CHMP1A-205ENST00000548650 C3orf84H3BNL1 204 aa13.33□□□□□ -0.28
CHMP1A-205ENST00000548650 PDCD5O14737 125 aa13.33□□□□□ -0.28
CHMP1A-205ENST00000548650 IGLV1-51P01701 117 aa13.33□□□□□ -0.28
CHMP1A-205ENST00000548650 RAB6AP20340 208 aa13.33□□□□□ -0.28
CHMP1A-205ENST00000548650 LGALS7P47929 136 aa13.33□□□□□ -0.28
CHMP1A-205ENST00000548650 MRGPRG-AS1Q2M3A8 158 aa13.33□□□□□ -0.28
CHMP1A-205ENST00000548650 TMEM177Q53S58 311 aa13.33□□□□□ -0.28
CHMP1A-205ENST00000548650 OR5T1Q8NG75 326 aa13.33□□□□□ -0.28
CHMP1A-205ENST00000548650 ZNF355PQ9NSJ1 428 aa13.33□□□□□ -0.28
CHMP1A-205ENST00000548650 STUB1Q9UNE7 303 aa13.33□□□□□ -0.28
CHMP1A-205ENST00000548650 A0A075B6Q4 140 aa13.32□□□□□ -0.28
CHMP1A-205ENST00000548650 C13orf42A0A1B0GVH6 325 aa13.32□□□□□ -0.28
CHMP1A-205ENST00000548650 SRRM4A7MD48 611 aaKnown RBP13.32□□□□□ -0.28
CHMP1A-205ENST00000548650 CNIH1O95406 144 aa13.32□□□□□ -0.28
CHMP1A-205ENST00000548650 BRI3O95415 125 aa13.32□□□□□ -0.28
CHMP1A-205ENST00000548650 ZP3P21754 424 aa13.32□□□□□ -0.28
CHMP1A-205ENST00000548650 GADD45AP24522 165 aa13.32□□□□□ -0.28
CHMP1A-205ENST00000548650 HSPA13P48723 471 aa13.32□□□□□ -0.28
CHMP1A-205ENST00000548650 SRSF7Q16629 238 aaKnown RBP eCLIP13.32□□□□□ -0.28
CHMP1A-205ENST00000548650 RTL8BQ17RB0 113 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms