RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 RPS19P39019 145 aaKnown RBP10.87□□□□□ -0.67
PTCH1-217ENST00000548420 RPL23AP62750 156 aaKnown RBP10.87□□□□□ -0.67
PTCH1-217ENST00000548420 IGSF11Q5DX21 431 aa10.87□□□□□ -0.67
PTCH1-217ENST00000548420 IDNKQ5T6J7 187 aa10.87□□□□□ -0.67
PTCH1-217ENST00000548420 C9orf66Q5T8R8 295 aa10.87□□□□□ -0.67
PTCH1-217ENST00000548420 CROCCP3Q8IVE0 287 aa10.87□□□□□ -0.67
PTCH1-217ENST00000548420 OR5AN1Q8NGI8 311 aa10.87□□□□□ -0.67
PTCH1-217ENST00000548420 OR13F1Q8NGS4 319 aa10.87□□□□□ -0.67
PTCH1-217ENST00000548420 ABHD14BQ96IU4 210 aa10.87□□□□□ -0.67
PTCH1-217ENST00000548420 RITA1Q96K30 269 aa10.87□□□□□ -0.67
PTCH1-217ENST00000548420 DCSTAMPQ9H295 470 aa10.87□□□□□ -0.67
PTCH1-217ENST00000548420 RDH8Q9NYR8 311 aa10.87□□□□□ -0.67
PTCH1-217ENST00000548420 A0A0A6YYH2 397 aa10.86□□□□□ -0.67
PTCH1-217ENST00000548420 A6NJ64 397 aa10.86□□□□□ -0.67
PTCH1-217ENST00000548420 NCBP2LA6PVI3 153 aaKnown RBP10.86□□□□□ -0.67
PTCH1-217ENST00000548420 LY86O95711 162 aa10.86□□□□□ -0.67
PTCH1-217ENST00000548420 MED14OSP0DP75 135 aa10.86□□□□□ -0.67
PTCH1-217ENST00000548420 PITPNAQ00169 270 aa10.86□□□□□ -0.67
PTCH1-217ENST00000548420 ARFRP1Q13795 201 aa10.86□□□□□ -0.67
PTCH1-217ENST00000548420 PNLIPRP3Q17RR3 467 aa10.86□□□□□ -0.67
PTCH1-217ENST00000548420 RPL39P5Q59GN2 51 aa10.86□□□□□ -0.67
PTCH1-217ENST00000548420 C9orf152Q5JTZ5 239 aa10.86□□□□□ -0.67
PTCH1-217ENST00000548420 NPBQ8NG41 125 aa10.86□□□□□ -0.67
PTCH1-217ENST00000548420 FUNDC2Q9BWH2 189 aa10.86□□□□□ -0.67
PTCH1-217ENST00000548420 SSX5O60225 188 aa10.85□□□□□ -0.67
PTCH1-217ENST00000548420 MC5RP33032 325 aa10.85□□□□□ -0.67
PTCH1-217ENST00000548420 TALDO1P37837 337 aa10.85□□□□□ -0.67
PTCH1-217ENST00000548420 GPR12P47775 334 aa10.85□□□□□ -0.67
PTCH1-217ENST00000548420 ACTBP60709 375 aa10.85□□□□□ -0.67
PTCH1-217ENST00000548420 LSM3P62310 102 aaKnown RBP10.85□□□□□ -0.67
PTCH1-217ENST00000548420 SLC35E3Q7Z769 313 aa10.85□□□□□ -0.67
PTCH1-217ENST00000548420 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-217ENST00000548420 OR10J5Q8NHC4 309 aa10.85□□□□□ -0.67
PTCH1-217ENST00000548420 CHPT1Q8WUD6 406 aa10.85□□□□□ -0.67
PTCH1-217ENST00000548420 MAFIPQ8WZ33 124 aa10.85□□□□□ -0.67
PTCH1-217ENST00000548420 RAX2Q96IS3 184 aa10.85□□□□□ -0.67
PTCH1-217ENST00000548420 ZNF580Q9UK33 172 aa10.85□□□□□ -0.67
PTCH1-217ENST00000548420 RNF150Q9ULK6 438 aa10.85□□□□□ -0.67
PTCH1-217ENST00000548420 DNAH11Q96DT5 4516 aa10.85□□□□□ -0.67
PTCH1-217ENST00000548420 HSPG2P98160 4391 aa10.84□□□□□ -0.67
PTCH1-217ENST00000548420 TMEM235A6NFC5 223 aa10.84□□□□□ -0.67
PTCH1-217ENST00000548420 OR5H14A6NHG9 310 aa10.84□□□□□ -0.67
PTCH1-217ENST00000548420 H0YJW9 148 aa10.84□□□□□ -0.67
PTCH1-217ENST00000548420 BET1O15155 118 aa10.84□□□□□ -0.67
PTCH1-217ENST00000548420 NDUFA3O95167 84 aa10.84□□□□□ -0.67
PTCH1-217ENST00000548420 RAB25P57735 213 aa10.84□□□□□ -0.67
PTCH1-217ENST00000548420 STPG2Q8N412 459 aa10.84□□□□□ -0.67
PTCH1-217ENST00000548420 SLC25A46Q96AG3 418 aa10.84□□□□□ -0.67
PTCH1-217ENST00000548420 NOL4LQ96MY1 436 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-217ENST00000548420 RNF5Q99942 180 aa10.84□□□□□ -0.67
PTCH1-217ENST00000548420 RASL11BQ9BPW5 248 aa10.84□□□□□ -0.67
PTCH1-217ENST00000548420 HSPB9Q9BQS6 159 aa10.84□□□□□ -0.67
PTCH1-217ENST00000548420 FAT2Q9NYQ8 4349 aa10.83□□□□□ -0.68
PTCH1-217ENST00000548420 PSMB11A5LHX3 300 aa10.83□□□□□ -0.68
PTCH1-217ENST00000548420 SEC14L6B5MCN3 397 aa10.83□□□□□ -0.68
PTCH1-217ENST00000548420 AP4M1O00189 453 aa10.83□□□□□ -0.68
PTCH1-217ENST00000548420 DEDDO75618 318 aa10.83□□□□□ -0.68
PTCH1-217ENST00000548420 IGF1P05019 195 aa10.83□□□□□ -0.68
PTCH1-217ENST00000548420 CTXN2P0C2S0 81 aa10.83□□□□□ -0.68
PTCH1-217ENST00000548420 CNTFRP26992 372 aa10.83□□□□□ -0.68
PTCH1-217ENST00000548420 SOX6P35712 828 aa10.83□□□□□ -0.68
PTCH1-217ENST00000548420 MMDQ15546 238 aa10.83□□□□□ -0.68
PTCH1-217ENST00000548420 FAM131AQ6UXB0 335 aa10.83□□□□□ -0.68
PTCH1-217ENST00000548420 ANKRD13BQ86YJ7 626 aa10.83□□□□□ -0.68
PTCH1-217ENST00000548420 FOXRED2Q8IWF2 684 aa10.83□□□□□ -0.68
PTCH1-217ENST00000548420 H1FOOQ8IZA3 346 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-217ENST00000548420 ZNF383Q8NA42 475 aa10.83□□□□□ -0.68
PTCH1-217ENST00000548420 NUDCD2Q8WVJ2 157 aa10.83□□□□□ -0.68
PTCH1-217ENST00000548420 KCTD12Q96CX2 325 aaKnown RBP10.83□□□□□ -0.68
PTCH1-217ENST00000548420 ST6GALNAC5Q9BVH7 336 aa10.83□□□□□ -0.68
PTCH1-217ENST00000548420 ZNF221Q9UK13 617 aa10.83□□□□□ -0.68
PTCH1-217ENST00000548420 TRAV18A0A075B6X5 111 aa10.82□□□□□ -0.68
PTCH1-217ENST00000548420 NBR2O15453 112 aa10.82□□□□□ -0.68
PTCH1-217ENST00000548420 XRCC3O43542 346 aa10.82□□□□□ -0.68
PTCH1-217ENST00000548420 RBBP9O75884 186 aa10.82□□□□□ -0.68
PTCH1-217ENST00000548420 HLA-DRB1P01911 266 aa10.82□□□□□ -0.68
PTCH1-217ENST00000548420 OR8U9P0C7N5 309 aa10.82□□□□□ -0.68
PTCH1-217ENST00000548420 ALDH3B2P48448 385 aa10.82□□□□□ -0.68
PTCH1-217ENST00000548420 LINC00205P59089 165 aa10.82□□□□□ -0.68
PTCH1-217ENST00000548420 GNG2P59768 71 aa10.82□□□□□ -0.68
PTCH1-217ENST00000548420 NCS1P62166 190 aa10.82□□□□□ -0.68
PTCH1-217ENST00000548420 CFHR3Q02985 330 aa10.82□□□□□ -0.68
PTCH1-217ENST00000548420 C5orf64Q2M2E5 130 aa10.82□□□□□ -0.68
PTCH1-217ENST00000548420 CNIH2Q6PI25 160 aa10.82□□□□□ -0.68
PTCH1-217ENST00000548420 GLDNQ6ZMI3 551 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-217ENST00000548420 ZNF329Q86UD4 541 aa10.82□□□□□ -0.68
PTCH1-217ENST00000548420 COMMD1Q8N668 190 aa10.82□□□□□ -0.68
PTCH1-217ENST00000548420 OR8U1Q8NH10 309 aa10.82□□□□□ -0.68
PTCH1-217ENST00000548420 C5orf30Q96GV9 206 aa10.82□□□□□ -0.68
PTCH1-217ENST00000548420 AUNIPQ9H7T9 357 aa10.82□□□□□ -0.68
PTCH1-217ENST00000548420 DIABLOQ9NR28 239 aa10.82□□□□□ -0.68
PTCH1-217ENST00000548420 SDHAF2Q9NX18 166 aa10.82□□□□□ -0.68
PTCH1-217ENST00000548420 ZNF107Q9UII5 783 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-217ENST00000548420 LINC00527Q9UJ94 153 aa10.82□□□□□ -0.68
PTCH1-217ENST00000548420 WASHC3Q9Y3C0 194 aa10.82□□□□□ -0.68
PTCH1-217ENST00000548420 TFAP2AP05549 437 aa10.81□□□□□ -0.68
PTCH1-217ENST00000548420 VBP1P61758 197 aa10.81□□□□□ -0.68
PTCH1-217ENST00000548420 CTF1Q16619 201 aa10.81□□□□□ -0.68
PTCH1-217ENST00000548420 RNF152Q8N8N0 203 aa10.81□□□□□ -0.68
PTCH1-217ENST00000548420 DRAXINQ8NBI3 349 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms