RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 A8MWP6 167 aa0.48□□□□□ -2.33
CEP290-204ENST00000547926 F8VP50 259 aa0.48□□□□□ -2.33
CEP290-204ENST00000547926 PLPP3O14495 311 aa0.48□□□□□ -2.33
CEP290-204ENST00000547926 CASC3O15234 703 aaKnown RBP0.48□□□□□ -2.33
CEP290-204ENST00000547926 SPOPO43791 374 aa0.48□□□□□ -2.33
CEP290-204ENST00000547926 CRYGDP07320 174 aa0.48□□□□□ -2.33
CEP290-204ENST00000547926 ZNF3P17036 446 aa0.48□□□□□ -2.33
CEP290-204ENST00000547926 GCLMP48507 274 aa0.48□□□□□ -2.33
CEP290-204ENST00000547926 OR2B6P58173 313 aa0.48□□□□□ -2.33
CEP290-204ENST00000547926 SRSF6Q13247 344 aaKnown RBP0.48□□□□□ -2.33
CEP290-204ENST00000547926 WDR43Q15061 677 aaKnown RBP eCLIP0.48□□□□□ -2.33
CEP290-204ENST00000547926 TPRXLQ17RH7 258 aa0.48□□□□□ -2.33
CEP290-204ENST00000547926 FAM19A3Q7Z5A8 133 aa0.48□□□□□ -2.33
CEP290-204ENST00000547926 SLC25A45Q8N413 288 aa0.48□□□□□ -2.33
CEP290-204ENST00000547926 OR52K2Q8NGK3 314 aa0.48□□□□□ -2.33
CEP290-204ENST00000547926 CD200R1Q8TD46 325 aa0.48□□□□□ -2.33
CEP290-204ENST00000547926 CIDECQ96AQ7 238 aaPredicted RBP0.48□□□□□ -2.33
CEP290-204ENST00000547926 ZNF396Q96N95 335 aaPredicted RBP0.48□□□□□ -2.33
CEP290-204ENST00000547926 BIRC8Q96P09 236 aa0.48□□□□□ -2.33
CEP290-204ENST00000547926 SMR3AQ99954 134 aa0.48□□□□□ -2.33
CEP290-204ENST00000547926 MRPL32Q9BYC8 188 aaKnown RBP0.48□□□□□ -2.33
CEP290-204ENST00000547926 UPF3BQ9BZI7 483 aaKnown RBP0.48□□□□□ -2.33
CEP290-204ENST00000547926 MTCH2Q9Y6C9 303 aa0.48□□□□□ -2.33
CEP290-204ENST00000547926 QRICH2Q9H0J4 1663 aa0.48□□□□□ -2.33
CEP290-204ENST00000547926 MON2Q7Z3U7 1717 aa0.48□□□□□ -2.33
CEP290-204ENST00000547926 KIAA2026Q5HYC2 2103 aa0.48□□□□□ -2.33
CEP290-204ENST00000547926 SBF2Q86WG5 1849 aa0.48□□□□□ -2.33
CEP290-204ENST00000547926 NUMA1Q14980 2115 aa0.48□□□□□ -2.33
CEP290-204ENST00000547926 DIDO1Q9BTC0 2240 aaKnown RBP0.47□□□□□ -2.33
CEP290-204ENST00000547926 IGKV1D-43A0A0B4J1Z2 117 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 FAM25EA8MYX2 175 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 PDCD6O75340 191 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 ARR3P36575 388 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 TMED1Q13445 227 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 SDIM1Q6ZPB5 146 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 LINC00523Q86TU6 105 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 ERMNQ8TAM6 284 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 SPPL2BQ8TCT7 592 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 MAP1LC3CQ9BXW4 147 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 POTEKPQ9BYX7 375 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 SDHAF2Q9NX18 166 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 TBL2Q9Y4P3 447 aaKnown RBP0.47□□□□□ -2.33
CEP290-204ENST00000547926 HUWE1Q7Z6Z7 4374 aaKnown RBP0.47□□□□□ -2.33
CEP290-204ENST00000547926 ARFGEF1Q9Y6D6 1849 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 SCAPERQ9BY12 1400 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 CCDC88CQ9P219 2028 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 ROS1P08922 2347 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 LRRC37AA6NMS7 1700 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 TSC2P49815 1807 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 IGHV3OR15-7A0A075B7D8 119 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 H0YIV9 168 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 SOD1P00441 154 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 SLC2A1P11166 492 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 SPAM1P38567 509 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 DOC2AQ14183 400 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 HNRNPA1L2Q32P51 320 aaKnown RBP0.47□□□□□ -2.33
CEP290-204ENST00000547926 HES3Q5TGS1 186 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 LGALS9CQ6DKI2 356 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 CNPY4Q8N129 248 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 FAM184AQ8NB25 1140 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 DOK4Q8TEW6 326 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 CASTOR1Q8WTX7 329 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 FAM131CQ96AQ9 280 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 C16orf95Q9H693 158 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 DIABLOQ9NR28 239 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 FREM1Q5H8C1 2179 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 KIAA1107Q9UPP5 1409 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 QSER1Q2KHR3 1735 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 PKD1P98161 4303 aa0.47□□□□□ -2.33
CEP290-204ENST00000547926 FAT1Q14517 4588 aa0.46□□□□□ -2.34
CEP290-204ENST00000547926 LRP1BQ9NZR2 4599 aa0.46□□□□□ -2.34
CEP290-204ENST00000547926 J3QLI3 93 aa0.46□□□□□ -2.34
CEP290-204ENST00000547926 TOR1AO14656 332 aa0.46□□□□□ -2.34
CEP290-204ENST00000547926 PRMT5O14744 637 aaPredicted RBP0.46□□□□□ -2.34
CEP290-204ENST00000547926 NEMFO60524 1076 aa0.46□□□□□ -2.34
CEP290-204ENST00000547926 IVLP07476 585 aa0.46□□□□□ -2.34
CEP290-204ENST00000547926 ASIPP42127 132 aa0.46□□□□□ -2.34
CEP290-204ENST00000547926 EMP2P54851 167 aa0.46□□□□□ -2.34
CEP290-204ENST00000547926 RAB38P57729 211 aa0.46□□□□□ -2.34
CEP290-204ENST00000547926 RHOAP61586 193 aa0.46□□□□□ -2.34
CEP290-204ENST00000547926 STX4Q12846 297 aa0.46□□□□□ -2.34
CEP290-204ENST00000547926 RESP18Q5W5W9 173 aa0.46□□□□□ -2.34
CEP290-204ENST00000547926 ZFAND2AQ8N6M9 145 aa0.46□□□□□ -2.34
CEP290-204ENST00000547926 NELFBQ8WX92 580 aa0.46□□□□□ -2.34
CEP290-204ENST00000547926 CFAP53Q96M91 514 aa0.46□□□□□ -2.34
CEP290-204ENST00000547926 APOL4Q9BPW4 351 aa0.46□□□□□ -2.34
CEP290-204ENST00000547926 SUCNR1Q9BXA5 334 aa0.46□□□□□ -2.34
CEP290-204ENST00000547926 ANKHQ9HCJ1 492 aa0.46□□□□□ -2.34
CEP290-204ENST00000547926 RAB3GAP2Q9H2M9 1393 aa0.46□□□□□ -2.34
CEP290-204ENST00000547926 ANK3Q12955 4377 aaKnown RBP0.46□□□□□ -2.34
CEP290-204ENST00000547926 ADGRL2O95490 1459 aa0.46□□□□□ -2.34
CEP290-204ENST00000547926 XRN1Q8IZH2 1706 aaKnown RBP0.46□□□□□ -2.34
CEP290-204ENST00000547926 CCDC88AQ3V6T2 1871 aa0.46□□□□□ -2.34
CEP290-204ENST00000547926 DNAH7Q8WXX0 4024 aa0.46□□□□□ -2.34
CEP290-204ENST00000547926 PARP4Q9UKK3 1724 aaKnown RBP0.46□□□□□ -2.34
CEP290-204ENST00000547926 INO80Q9ULG1 1556 aaPredicted RBP0.46□□□□□ -2.34
CEP290-204ENST00000547926 TROQ12816 1431 aaPredicted RBP0.46□□□□□ -2.34
CEP290-204ENST00000547926 NCOA3Q9Y6Q9 1424 aa0.46□□□□□ -2.34
CEP290-204ENST00000547926 KIAA0232Q92628 1395 aa0.46□□□□□ -2.34
CEP290-204ENST00000547926 TMEM250H0YL14 139 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms