RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 RRASP10301 218 aa13.36□□□□□ -0.27
CCDC38-203ENST00000546803 TBPP20226 339 aa13.36□□□□□ -0.27
CCDC38-203ENST00000546803 DUTP33316 252 aaKnown RBP13.36□□□□□ -0.27
CCDC38-203ENST00000546803 HRH1P35367 487 aa13.36□□□□□ -0.27
CCDC38-203ENST00000546803 VDAC2P45880 294 aaPredicted RBP13.36□□□□□ -0.27
CCDC38-203ENST00000546803 F2RL1P55085 397 aa13.36□□□□□ -0.27
CCDC38-203ENST00000546803 HERV-K104P61576 105 aa13.36□□□□□ -0.27
CCDC38-203ENST00000546803 MMDQ15546 238 aa13.36□□□□□ -0.27
CCDC38-203ENST00000546803 ZBTB34Q8NCN2 500 aa13.36□□□□□ -0.27
CCDC38-203ENST00000546803 NPBQ8NG41 125 aa13.36□□□□□ -0.27
CCDC38-203ENST00000546803 OR6F1Q8NGZ6 308 aa13.36□□□□□ -0.27
CCDC38-203ENST00000546803 BORCS5Q969J3 196 aa13.36□□□□□ -0.27
CCDC38-203ENST00000546803 C5orf30Q96GV9 206 aa13.36□□□□□ -0.27
CCDC38-203ENST00000546803 RASL11BQ9BPW5 248 aa13.36□□□□□ -0.27
CCDC38-203ENST00000546803 SOSTQ9BQB4 213 aa13.36□□□□□ -0.27
CCDC38-203ENST00000546803 SLC35D1Q9NTN3 355 aa13.36□□□□□ -0.27
CCDC38-203ENST00000546803 KLK11Q9UBX7 282 aa13.36□□□□□ -0.27
CCDC38-203ENST00000546803 ZNF107Q9UII5 783 aaPredicted RBP13.36□□□□□ -0.27
CCDC38-203ENST00000546803 RBMX2Q9Y388 322 aaKnown RBP13.36□□□□□ -0.27
CCDC38-203ENST00000546803 IGLV2-14P01704 120 aa13.35□□□□□ -0.27
CCDC38-203ENST00000546803 LINC00205P59089 165 aa13.35□□□□□ -0.27
CCDC38-203ENST00000546803 CBX3Q13185 183 aa13.35□□□□□ -0.27
CCDC38-203ENST00000546803 RTL8BQ17RB0 113 aa13.35□□□□□ -0.27
CCDC38-203ENST00000546803 RNASE12Q5GAN4 147 aaKnown RBP13.35□□□□□ -0.27
CCDC38-203ENST00000546803 C9orf152Q5JTZ5 239 aa13.35□□□□□ -0.27
CCDC38-203ENST00000546803 VAX1Q5SQQ9 334 aa13.35□□□□□ -0.27
CCDC38-203ENST00000546803 ZNF660Q6AZW8 331 aaPredicted RBP13.35□□□□□ -0.27
CCDC38-203ENST00000546803 FAM71E2Q8N5Q1 922 aa13.35□□□□□ -0.27
CCDC38-203ENST00000546803 SMIM4Q8WVI0 70 aa13.35□□□□□ -0.27
CCDC38-203ENST00000546803 SECTM1Q8WVN6 248 aa13.35□□□□□ -0.27
CCDC38-203ENST00000546803 FLYWCH2Q96CP2 140 aaKnown RBP13.35□□□□□ -0.27
CCDC38-203ENST00000546803 HSD17B10Q99714 261 aaKnown RBP13.35□□□□□ -0.27
CCDC38-203ENST00000546803 SLC5A7Q9GZV3 580 aa13.35□□□□□ -0.27
CCDC38-203ENST00000546803 KIAA1456Q9P272 454 aa13.35□□□□□ -0.27
CCDC38-203ENST00000546803 NBR2O15453 112 aa13.34□□□□□ -0.27
CCDC38-203ENST00000546803 PEX14O75381 377 aa13.34□□□□□ -0.27
CCDC38-203ENST00000546803 TSPAN5P62079 268 aa13.34□□□□□ -0.27
CCDC38-203ENST00000546803 DGCR2P98153 550 aa13.34□□□□□ -0.27
CCDC38-203ENST00000546803 FOXB2Q5VYV0 432 aa13.34□□□□□ -0.27
CCDC38-203ENST00000546803 ZNF66Q6ZN08 573 aa13.34□□□□□ -0.27
CCDC38-203ENST00000546803 TMEM229BQ8NBD8 167 aa13.34□□□□□ -0.27
CCDC38-203ENST00000546803 DDB2Q92466 427 aa13.34□□□□□ -0.27
CCDC38-203ENST00000546803 MOB3AQ96BX8 217 aa13.34□□□□□ -0.27
CCDC38-203ENST00000546803 RITA1Q96K30 269 aa13.34□□□□□ -0.27
CCDC38-203ENST00000546803 TSNAXQ99598 290 aaKnown RBP13.34□□□□□ -0.27
CCDC38-203ENST00000546803 ZNF2Q9BSG1 426 aaPredicted RBP13.34□□□□□ -0.27
CCDC38-203ENST00000546803 WNT10AQ9GZT5 417 aa13.34□□□□□ -0.27
CCDC38-203ENST00000546803 SH2D7A6NKC9 451 aaPredicted RBP13.33□□□□□ -0.28
CCDC38-203ENST00000546803 GSTZ1O43708 216 aaPredicted RBP13.33□□□□□ -0.28
CCDC38-203ENST00000546803 NDUFA3O95167 84 aa13.33□□□□□ -0.28
CCDC38-203ENST00000546803 SPDEFO95238 335 aa13.33□□□□□ -0.28
CCDC38-203ENST00000546803 IGHG2P01859 326 aa13.33□□□□□ -0.28
CCDC38-203ENST00000546803 IGKV1-16P04430 117 aa13.33□□□□□ -0.28
CCDC38-203ENST00000546803 TAS2R19P59542 299 aa13.33□□□□□ -0.28
CCDC38-203ENST00000546803 FXYD4P59646 89 aa13.33□□□□□ -0.28
CCDC38-203ENST00000546803 RPS16P62249 146 aaKnown RBP13.33□□□□□ -0.28
CCDC38-203ENST00000546803 RNASE10Q5GAN6 216 aaKnown RBP13.33□□□□□ -0.28
CCDC38-203ENST00000546803 SLC35E3Q7Z769 313 aa13.33□□□□□ -0.28
CCDC38-203ENST00000546803 KLHDC1Q8N7A1 406 aa13.33□□□□□ -0.28
CCDC38-203ENST00000546803 RBMXL1Q96E39 390 aaKnown RBP13.33□□□□□ -0.28
CCDC38-203ENST00000546803 CCL28Q9NRJ3 127 aa13.33□□□□□ -0.28
CCDC38-203ENST00000546803 TAS2R8Q9NYW2 309 aa13.33□□□□□ -0.28
CCDC38-203ENST00000546803 PRELID3BQ9Y3B1 194 aa13.33□□□□□ -0.28
CCDC38-203ENST00000546803 RRHO14718 337 aa13.32□□□□□ -0.28
CCDC38-203ENST00000546803 KCNAB3O43448 404 aa13.32□□□□□ -0.28
CCDC38-203ENST00000546803 IFNA6P05013 189 aa13.32□□□□□ -0.28
CCDC38-203ENST00000546803 VSIG10L2P0DP72 767 aa13.32□□□□□ -0.28
CCDC38-203ENST00000546803 PTBP1P26599 531 aaKnown RBP eCLIP13.32□□□□□ -0.28
CCDC38-203ENST00000546803 LGALS7P47929 136 aa13.32□□□□□ -0.28
CCDC38-203ENST00000546803 EIF4EBP1Q13541 118 aaPredicted RBP13.32□□□□□ -0.28
CCDC38-203ENST00000546803 C5orf64Q2M2E5 130 aa13.32□□□□□ -0.28
CCDC38-203ENST00000546803 KCTD9Q7L273 389 aa13.32□□□□□ -0.28
CCDC38-203ENST00000546803 TMEM17Q86X19 198 aa13.32□□□□□ -0.28
CCDC38-203ENST00000546803 ARRDC1Q8N5I2 433 aa13.32□□□□□ -0.28
CCDC38-203ENST00000546803 BVESQ8NE79 360 aa13.32□□□□□ -0.28
CCDC38-203ENST00000546803 CITED1Q99966 193 aa13.32□□□□□ -0.28
CCDC38-203ENST00000546803 LINC00473A8K010 186 aa13.31□□□□□ -0.28
CCDC38-203ENST00000546803 M0QYG6 137 aa13.31□□□□□ -0.28
CCDC38-203ENST00000546803 CD74P04233 296 aa13.31□□□□□ -0.28
CCDC38-203ENST00000546803 CD3DP04234 171 aa13.31□□□□□ -0.28
CCDC38-203ENST00000546803 CSF1P09603 554 aa13.31□□□□□ -0.28
CCDC38-203ENST00000546803 CNTFRP26992 372 aa13.31□□□□□ -0.28
CCDC38-203ENST00000546803 TMEM95Q3KNT9 176 aa13.31□□□□□ -0.28
CCDC38-203ENST00000546803 TMEM177Q53S58 311 aa13.31□□□□□ -0.28
CCDC38-203ENST00000546803 LIN54Q6MZP7 749 aa13.31□□□□□ -0.28
CCDC38-203ENST00000546803 LPCAT3Q6P1A2 487 aa13.31□□□□□ -0.28
CCDC38-203ENST00000546803 CCDC190Q86UF4 302 aa13.31□□□□□ -0.28
CCDC38-203ENST00000546803 FOXRED2Q8IWF2 684 aa13.31□□□□□ -0.28
CCDC38-203ENST00000546803 MFSD4AQ8N468 514 aa13.31□□□□□ -0.28
CCDC38-203ENST00000546803 A6NHS1 94 aa13.3□□□□□ -0.28
CCDC38-203ENST00000546803 AP4M1O00189 453 aa13.3□□□□□ -0.28
CCDC38-203ENST00000546803 RAB3DO95716 219 aa13.3□□□□□ -0.28
CCDC38-203ENST00000546803 HLA-DRB1P01911 266 aa13.3□□□□□ -0.28
CCDC38-203ENST00000546803 GNRHRP30968 328 aa13.3□□□□□ -0.28
CCDC38-203ENST00000546803 ETV6P41212 452 aa13.3□□□□□ -0.28
CCDC38-203ENST00000546803 KIR2DS2P43631 304 aa13.3□□□□□ -0.28
CCDC38-203ENST00000546803 UCP3P55916 312 aa13.3□□□□□ -0.28
CCDC38-203ENST00000546803 KRTAP10-3P60369 221 aa13.3□□□□□ -0.28
CCDC38-203ENST00000546803 RPL30P62888 115 aaKnown RBP13.3□□□□□ -0.28
CCDC38-203ENST00000546803 CATR1Q13166 79 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms