RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 RDH8Q9NYR8 311 aa5.83□□□□□ -1.48
CPSF7-224ENST00000544990 OR1A1Q9P1Q5 309 aa5.83□□□□□ -1.48
CPSF7-224ENST00000544990 KIAA1456Q9P272 454 aa5.83□□□□□ -1.48
CPSF7-224ENST00000544990 RBM7Q9Y580 266 aaKnown RBP5.83□□□□□ -1.48
CPSF7-224ENST00000544990 TSSC4Q9Y5U2 329 aaPredicted RBP5.83□□□□□ -1.48
CPSF7-224ENST00000544990 TRBV6-7A0A0A0MS04 114 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 A0A0A6YYH2 397 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 IGKV1-6A0A0C4DH72 117 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 A6NJ64 397 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 H7C2Y5 167 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 NBR2O15453 112 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 RBBP9O75884 186 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 CTXN2P0C2S0 81 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 GSTT2P0CG29 244 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 GSTT2BP0CG30 244 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 CT45A6P0DMU7 189 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 CT45A5P0DMU8 189 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 CT45A7P0DMV0 189 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 RPS19P39019 145 aaKnown RBP5.82□□□□□ -1.48
CPSF7-224ENST00000544990 F2RL1P55085 397 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 GNG2P59768 71 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 ACTBP60709 375 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 PNLIPRP3Q17RR3 467 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 RPL39P5Q59GN2 51 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 IGSF11Q5DX21 431 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 KHDC1LQ5JSQ8 128 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 HACD4Q5VWC8 232 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 HIST2H2BDQ6DRA6 164 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 STPG2Q8N412 459 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 FAM71E2Q8N5Q1 922 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 COMMD1Q8N668 190 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.82□□□□□ -1.48
CPSF7-224ENST00000544990 YIPF6Q96EC8 236 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 RNF5Q99942 180 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 CABLES2Q9BTV7 478 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 ST6GALNAC5Q9BVH7 336 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 PLSCR3Q9NRY6 295 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 ZNF230Q9UIE0 474 aaPredicted RBP5.82□□□□□ -1.48
CPSF7-224ENST00000544990 RNF150Q9ULK6 438 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 SPATA2Q9UM82 520 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 GAB2Q9UQC2 676 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 WASHC3Q9Y3C0 194 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 WNK1Q9H4A3 2382 aa5.82□□□□□ -1.48
CPSF7-224ENST00000544990 TRAV18A0A075B6X5 111 aa5.81□□□□□ -1.48
CPSF7-224ENST00000544990 TRIM64CA6NLI5 447 aa5.81□□□□□ -1.48
CPSF7-224ENST00000544990 APOA2P02652 100 aa5.81□□□□□ -1.48
CPSF7-224ENST00000544990 TFAP2AP05549 437 aa5.81□□□□□ -1.48
CPSF7-224ENST00000544990 OR8U9P0C7N5 309 aa5.81□□□□□ -1.48
CPSF7-224ENST00000544990 OR5H8P0DN80 308 aa5.81□□□□□ -1.48
CPSF7-224ENST00000544990 LSM3P62310 102 aaKnown RBP5.81□□□□□ -1.48
CPSF7-224ENST00000544990 CBX3Q13185 183 aa5.81□□□□□ -1.48
CPSF7-224ENST00000544990 PLGLAQ15195 96 aa5.81□□□□□ -1.48
CPSF7-224ENST00000544990 ZNF260Q3ZCT1 412 aa5.81□□□□□ -1.48
CPSF7-224ENST00000544990 XP32Q5T750 250 aa5.81□□□□□ -1.48
CPSF7-224ENST00000544990 LIN54Q6MZP7 749 aa5.81□□□□□ -1.48
CPSF7-224ENST00000544990 TEX38Q6PEX7 206 aa5.81□□□□□ -1.48
CPSF7-224ENST00000544990 FAM131AQ6UXB0 335 aa5.81□□□□□ -1.48
CPSF7-224ENST00000544990 GLDNQ6ZMI3 551 aaPredicted RBP5.81□□□□□ -1.48
CPSF7-224ENST00000544990 ZNF329Q86UD4 541 aa5.81□□□□□ -1.48
CPSF7-224ENST00000544990 NPBQ8NG41 125 aa5.81□□□□□ -1.48
CPSF7-224ENST00000544990 OR5H6Q8NGV6 325 aa5.81□□□□□ -1.48
CPSF7-224ENST00000544990 OR8U1Q8NH10 309 aa5.81□□□□□ -1.48
CPSF7-224ENST00000544990 MAFIPQ8WZ33 124 aa5.81□□□□□ -1.48
CPSF7-224ENST00000544990 S100A16Q96FQ6 103 aaKnown RBP5.81□□□□□ -1.48
CPSF7-224ENST00000544990 NOL4LQ96MY1 436 aaPredicted RBP5.81□□□□□ -1.48
CPSF7-224ENST00000544990 PARP12Q9H0J9 701 aaKnown RBP5.81□□□□□ -1.48
CPSF7-224ENST00000544990 OR2D2Q9H210 308 aa5.81□□□□□ -1.48
CPSF7-224ENST00000544990 ZFP57Q9NU63 452 aa5.81□□□□□ -1.48
CPSF7-224ENST00000544990 ZNF107Q9UII5 783 aaPredicted RBP5.81□□□□□ -1.48
CPSF7-224ENST00000544990 LINC00527Q9UJ94 153 aa5.81□□□□□ -1.48
CPSF7-224ENST00000544990 ELF5Q9UKW6 265 aaPredicted RBP5.81□□□□□ -1.48
CPSF7-224ENST00000544990 PLXNB1O43157 2135 aa5.8□□□□□ -1.48
CPSF7-224ENST00000544990 TMEM235A6NFC5 223 aa5.8□□□□□ -1.48
CPSF7-224ENST00000544990 LINC01548A6NM66 108 aa5.8□□□□□ -1.48
CPSF7-224ENST00000544990 B5MCH6 92 aa5.8□□□□□ -1.48
CPSF7-224ENST00000544990 H0YJW9 148 aa5.8□□□□□ -1.48
CPSF7-224ENST00000544990 M0R1X1 148 aa5.8□□□□□ -1.48
CPSF7-224ENST00000544990 RRHO14718 337 aa5.8□□□□□ -1.48
CPSF7-224ENST00000544990 SLC22A5O76082 557 aa5.8□□□□□ -1.48
CPSF7-224ENST00000544990 NDUFA3O95167 84 aa5.8□□□□□ -1.48
CPSF7-224ENST00000544990 HLA-DRB1P01911 266 aa5.8□□□□□ -1.48
CPSF7-224ENST00000544990 VDAC1P21796 283 aa5.8□□□□□ -1.48
CPSF7-224ENST00000544990 SLC6A1P30531 599 aa5.8□□□□□ -1.48
CPSF7-224ENST00000544990 TGFBR1P36897 503 aa5.8□□□□□ -1.48
CPSF7-224ENST00000544990 RPS16P62249 146 aaKnown RBP5.8□□□□□ -1.48
CPSF7-224ENST00000544990 C5orf64Q2M2E5 130 aa5.8□□□□□ -1.48
CPSF7-224ENST00000544990 TCTEX1D4Q5JR98 221 aa5.8□□□□□ -1.48
CPSF7-224ENST00000544990 CNIH2Q6PI25 160 aa5.8□□□□□ -1.48
CPSF7-224ENST00000544990 C10orf99Q6UWK7 81 aa5.8□□□□□ -1.48
CPSF7-224ENST00000544990 PDPNQ86YL7 162 aa5.8□□□□□ -1.48
CPSF7-224ENST00000544990 H1FOOQ8IZA3 346 aaPredicted RBP5.8□□□□□ -1.48
CPSF7-224ENST00000544990 DRAXINQ8NBI3 349 aaPredicted RBP5.8□□□□□ -1.48
CPSF7-224ENST00000544990 OR13F1Q8NGS4 319 aa5.8□□□□□ -1.48
CPSF7-224ENST00000544990 NUDCD2Q8WVJ2 157 aa5.8□□□□□ -1.48
CPSF7-224ENST00000544990 FLYWCH2Q96CP2 140 aaKnown RBP5.8□□□□□ -1.48
CPSF7-224ENST00000544990 RITA1Q96K30 269 aa5.8□□□□□ -1.48
CPSF7-224ENST00000544990 TSNAXQ99598 290 aaKnown RBP5.8□□□□□ -1.48
CPSF7-224ENST00000544990 FUNDC2Q9BWH2 189 aa5.8□□□□□ -1.48
CPSF7-224ENST00000544990 ZNF580Q9UK33 172 aa5.8□□□□□ -1.48
CPSF7-224ENST00000544990 IGKV1D-8A0A087WSZ0 117 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms