RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 TCTEX1D1Q8N7M0 179 aa8.66□□□□□ -1.02
DDB1-221ENST00000543162 GLYATL2Q8WU03 294 aa8.66□□□□□ -1.02
DDB1-221ENST00000543162 RPEQ96AT9 228 aa8.66□□□□□ -1.02
DDB1-221ENST00000543162 MRPL20Q9BYC9 149 aaKnown RBP8.66□□□□□ -1.02
DDB1-221ENST00000543162 TMEM222Q9H0R3 208 aa8.66□□□□□ -1.02
DDB1-221ENST00000543162 PRR13Q9NZ81 148 aa8.66□□□□□ -1.02
DDB1-221ENST00000543162 MINOS1-NBL1R4GNA1 71 aa8.66□□□□□ -1.02
DDB1-221ENST00000543162 MYO9AB2RTY4 2548 aa8.66□□□□□ -1.02
DDB1-221ENST00000543162 NBPF19A0A087WUL8 3843 aa8.65□□□□□ -1.02
DDB1-221ENST00000543162 ABCA1O95477 2261 aa8.65□□□□□ -1.02
DDB1-221ENST00000543162 TRAV40A0A0B4J280 105 aa8.65□□□□□ -1.02
DDB1-221ENST00000543162 A0A0B4J2A0 478 aa8.65□□□□□ -1.02
DDB1-221ENST00000543162 IGHV1-69DA0A0B4J2H0 117 aa8.65□□□□□ -1.02
DDB1-221ENST00000543162 LY6LH3BQJ8 138 aa8.65□□□□□ -1.02
DDB1-221ENST00000543162 NPFFO15130 113 aa8.65□□□□□ -1.02
DDB1-221ENST00000543162 TXNL1O43396 289 aa8.65□□□□□ -1.02
DDB1-221ENST00000543162 IGHV1-69P01742 117 aa8.65□□□□□ -1.02
DDB1-221ENST00000543162 CT45A6P0DMU7 189 aa8.65□□□□□ -1.02
DDB1-221ENST00000543162 CT45A5P0DMU8 189 aa8.65□□□□□ -1.02
DDB1-221ENST00000543162 CT45A7P0DMV0 189 aa8.65□□□□□ -1.02
DDB1-221ENST00000543162 UCP1P25874 307 aa8.65□□□□□ -1.02
DDB1-221ENST00000543162 KIR2DS2P43631 304 aa8.65□□□□□ -1.02
DDB1-221ENST00000543162 LINC00205P59089 165 aa8.65□□□□□ -1.02
DDB1-221ENST00000543162 RRAS2P62070 204 aaPredicted RBP8.65□□□□□ -1.02
DDB1-221ENST00000543162 DIAPH2-AS1Q14236 149 aa8.65□□□□□ -1.02
DDB1-221ENST00000543162 MIDNQ504T8 468 aa8.65□□□□□ -1.02
DDB1-221ENST00000543162 LIN54Q6MZP7 749 aa8.65□□□□□ -1.02
DDB1-221ENST00000543162 LIAT1Q6ZQX7 453 aa8.65□□□□□ -1.02
DDB1-221ENST00000543162 LHFPL4Q7Z7J7 247 aa8.65□□□□□ -1.02
DDB1-221ENST00000543162 SPAG16Q8N0X2 631 aa8.65□□□□□ -1.02
DDB1-221ENST00000543162 LGI3Q8N145 548 aa8.65□□□□□ -1.02
DDB1-221ENST00000543162 ZNF383Q8NA42 475 aa8.65□□□□□ -1.02
DDB1-221ENST00000543162 CD300LFQ8TDQ1 290 aa8.65□□□□□ -1.02
DDB1-221ENST00000543162 FAM212BQ9NTI7 297 aaPredicted RBP8.65□□□□□ -1.02
DDB1-221ENST00000543162 SHPKQ9UHJ6 478 aa8.65□□□□□ -1.02
DDB1-221ENST00000543162 TBL2Q9Y4P3 447 aaKnown RBP8.65□□□□□ -1.02
DDB1-221ENST00000543162 FLNAP21333 2647 aaKnown RBP8.64□□□□□ -1.03
DDB1-221ENST00000543162 IGHV3OR16-10A0A075B7F0 116 aa8.64□□□□□ -1.03
DDB1-221ENST00000543162 PIGBOS1A0A0B4J2F0 54 aa8.64□□□□□ -1.03
DDB1-221ENST00000543162 A8MV72 311 aaPredicted RBP8.64□□□□□ -1.03
DDB1-221ENST00000543162 OOSP1A8MZH6 123 aa8.64□□□□□ -1.03
DDB1-221ENST00000543162 FCGR3BO75015 233 aa8.64□□□□□ -1.03
DDB1-221ENST00000543162 CDS2O95674 445 aa8.64□□□□□ -1.03
DDB1-221ENST00000543162 AVPP01185 164 aa8.64□□□□□ -1.03
DDB1-221ENST00000543162 APOA2P02652 100 aa8.64□□□□□ -1.03
DDB1-221ENST00000543162 SAA4P35542 130 aa8.64□□□□□ -1.03
DDB1-221ENST00000543162 LPAR6P43657 344 aa8.64□□□□□ -1.03
DDB1-221ENST00000543162 TAGLNQ01995 201 aaKnown RBP8.64□□□□□ -1.03
DDB1-221ENST00000543162 ZNF816Q0VGE8 651 aaPredicted RBP8.64□□□□□ -1.03
DDB1-221ENST00000543162 RTL8BQ17RB0 113 aa8.64□□□□□ -1.03
DDB1-221ENST00000543162 ZNF585BQ52M93 769 aa8.64□□□□□ -1.03
DDB1-221ENST00000543162 LDLRAD2Q5SZI1 272 aa8.64□□□□□ -1.03
DDB1-221ENST00000543162 TMEM268Q5VZI3 342 aa8.64□□□□□ -1.03
DDB1-221ENST00000543162 MOB3BQ86TA1 216 aa8.64□□□□□ -1.03
DDB1-221ENST00000543162 ZNF695Q8IW36 515 aa8.64□□□□□ -1.03
DDB1-221ENST00000543162 DDB2Q92466 427 aa8.64□□□□□ -1.03
DDB1-221ENST00000543162 TMEM56Q96MV1 263 aa8.64□□□□□ -1.03
DDB1-221ENST00000543162 NABP2Q9BQ15 211 aa8.64□□□□□ -1.03
DDB1-221ENST00000543162 SLC35D1Q9NTN3 355 aa8.64□□□□□ -1.03
DDB1-221ENST00000543162 HILPDAQ9Y5L2 63 aa8.64□□□□□ -1.03
DDB1-221ENST00000543162 TMEM56-RWDD3S4R434 201 aa8.64□□□□□ -1.03
DDB1-221ENST00000543162 IGHV1-3A0A0C4DH29 117 aa8.63□□□□□ -1.03
DDB1-221ENST00000543162 HMX3A6NHT5 357 aa8.63□□□□□ -1.03
DDB1-221ENST00000543162 H0YJW9 148 aa8.63□□□□□ -1.03
DDB1-221ENST00000543162 H7C2Y5 167 aa8.63□□□□□ -1.03
DDB1-221ENST00000543162 RBFOX2O43251 390 aaKnown RBP eCLIP8.63□□□□□ -1.037e-7■■□□□ 13.4
DDB1-221ENST00000543162 RAMP3O60896 148 aa8.63□□□□□ -1.03
DDB1-221ENST00000543162 IGHV4-38-2P0DP08 117 aa8.63□□□□□ -1.03
DDB1-221ENST00000543162 RRASP10301 218 aa8.63□□□□□ -1.03
DDB1-221ENST00000543162 RPA2P15927 270 aa8.63□□□□□ -1.03
DDB1-221ENST00000543162 MC5RP33032 325 aa8.63□□□□□ -1.03
DDB1-221ENST00000543162 BRWD1-AS2P59051 145 aa8.63□□□□□ -1.03
DDB1-221ENST00000543162 FCN2Q15485 313 aa8.63□□□□□ -1.03
DDB1-221ENST00000543162 SSX2Q16385 188 aa8.63□□□□□ -1.03
DDB1-221ENST00000543162 RUSC1-AS1Q66K80 236 aa8.63□□□□□ -1.03
DDB1-221ENST00000543162 DHRS7BQ6IAN0 325 aaPredicted RBP8.63□□□□□ -1.03
DDB1-221ENST00000543162 CCDC144NLQ6NUI1 221 aa8.63□□□□□ -1.03
DDB1-221ENST00000543162 SELENOHQ8IZQ5 122 aaKnown RBP8.63□□□□□ -1.03
DDB1-221ENST00000543162 OR8H3Q8N146 312 aa8.63□□□□□ -1.03
DDB1-221ENST00000543162 PIP4P2Q8N4L2 257 aa8.63□□□□□ -1.03
DDB1-221ENST00000543162 LRTM2Q8N967 370 aa8.63□□□□□ -1.03
DDB1-221ENST00000543162 OR5AN1Q8NGI8 311 aa8.63□□□□□ -1.03
DDB1-221ENST00000543162 OR4S2Q8NH73 311 aa8.63□□□□□ -1.03
DDB1-221ENST00000543162 LHFPL5Q8TAF8 219 aa8.63□□□□□ -1.03
DDB1-221ENST00000543162 RBPMSQ93062 196 aaKnown RBP8.63□□□□□ -1.03
DDB1-221ENST00000543162 IL22RA2Q969J5 263 aa8.63□□□□□ -1.03
DDB1-221ENST00000543162 MALSU1Q96EH3 234 aa8.63□□□□□ -1.03
DDB1-221ENST00000543162 RAB18Q9NP72 206 aa8.63□□□□□ -1.03
DDB1-221ENST00000543162 MGAT4CQ9UBM8 478 aa8.63□□□□□ -1.03
DDB1-221ENST00000543162 DUXBA0A1W2PPF3 345 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 A0A1W2PPI3 338 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 DBX1A6NMT0 343 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 GOSR2O14653 212 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 ADAP1O75689 374 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 ATG12O94817 140 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 S1PR2O95136 353 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 CRYZL1O95825 349 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 IFNA21P01568 189 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 HOXB5P09067 269 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 TRAPPC2P0DI81 140 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms