RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 ACTBL2Q562R1 376 aa10.84□□□□□ -0.67
SUDS3-203ENST00000541591 ZNF660Q6AZW8 331 aaPredicted RBP10.84□□□□□ -0.67
SUDS3-203ENST00000541591 C22orf42Q6IC83 251 aa10.84□□□□□ -0.67
SUDS3-203ENST00000541591 NR2C2APQ86WQ0 139 aa10.84□□□□□ -0.67
SUDS3-203ENST00000541591 OR5T1Q8NG75 326 aa10.84□□□□□ -0.67
SUDS3-203ENST00000541591 RAB3CQ96E17 227 aa10.84□□□□□ -0.67
SUDS3-203ENST00000541591 TOLLIPQ9H0E2 274 aa10.84□□□□□ -0.67
SUDS3-203ENST00000541591 ZNF355PQ9NSJ1 428 aa10.84□□□□□ -0.67
SUDS3-203ENST00000541591 SLC35D1Q9NTN3 355 aa10.84□□□□□ -0.67
SUDS3-203ENST00000541591 NUBP2Q9Y5Y2 271 aa10.84□□□□□ -0.67
SUDS3-203ENST00000541591 LINC01619G3V211 115 aa10.83□□□□□ -0.68
SUDS3-203ENST00000541591 ITGB1BP1O14713 200 aa10.83□□□□□ -0.68
SUDS3-203ENST00000541591 RAMP3O60896 148 aa10.83□□□□□ -0.68
SUDS3-203ENST00000541591 APOA2P02652 100 aa10.83□□□□□ -0.68
SUDS3-203ENST00000541591 TRGV3P03979 118 aa10.83□□□□□ -0.68
SUDS3-203ENST00000541591 LGALS1P09382 135 aaKnown RBP10.83□□□□□ -0.68
SUDS3-203ENST00000541591 MYL9P24844 172 aa10.83□□□□□ -0.68
SUDS3-203ENST00000541591 MC5RP33032 325 aa10.83□□□□□ -0.68
SUDS3-203ENST00000541591 SSBP2P81877 361 aaPredicted RBP10.83□□□□□ -0.68
SUDS3-203ENST00000541591 MRPS15P82914 257 aaKnown RBP10.83□□□□□ -0.68
SUDS3-203ENST00000541591 OVCH2Q7RTZ1 564 aa10.83□□□□□ -0.68
SUDS3-203ENST00000541591 BVESQ8NE79 360 aa10.83□□□□□ -0.68
SUDS3-203ENST00000541591 OR10R2Q8NGX6 335 aa10.83□□□□□ -0.68
SUDS3-203ENST00000541591 NDUFB11Q9NX14 153 aa10.83□□□□□ -0.68
SUDS3-203ENST00000541591 SDHAF2Q9NX18 166 aa10.83□□□□□ -0.68
SUDS3-203ENST00000541591 RAB22AQ9UL26 194 aa10.83□□□□□ -0.68
SUDS3-203ENST00000541591 RYR3Q15413 4870 aa10.83□□□□□ -0.68
SUDS3-203ENST00000541591 ANKRD34BA5PLL1 514 aa10.82□□□□□ -0.68
SUDS3-203ENST00000541591 IFITM5A6NNB3 132 aa10.82□□□□□ -0.68
SUDS3-203ENST00000541591 MFNGO00587 321 aa10.82□□□□□ -0.68
SUDS3-203ENST00000541591 IGLV2-23P01705 113 aa10.82□□□□□ -0.68
SUDS3-203ENST00000541591 SPNP16150 400 aa10.82□□□□□ -0.68
SUDS3-203ENST00000541591 CRIP2P52943 208 aaPredicted RBP10.82□□□□□ -0.68
SUDS3-203ENST00000541591 RUNX1Q01196 453 aa10.82□□□□□ -0.68
SUDS3-203ENST00000541591 TAGLNQ01995 201 aaKnown RBP10.82□□□□□ -0.68
SUDS3-203ENST00000541591 ARFRP1Q13795 201 aa10.82□□□□□ -0.68
SUDS3-203ENST00000541591 FXYD3Q14802 87 aa10.82□□□□□ -0.68
SUDS3-203ENST00000541591 OR4A4PQ8NGN8 299 aa10.82□□□□□ -0.68
SUDS3-203ENST00000541591 PTX4Q96A99 478 aa10.82□□□□□ -0.68
SUDS3-203ENST00000541591 CHCHD6Q9BRQ6 235 aa10.82□□□□□ -0.68
SUDS3-203ENST00000541591 ATG5Q9H1Y0 275 aa10.82□□□□□ -0.68
SUDS3-203ENST00000541591 ADAM30Q9UKF2 790 aa10.82□□□□□ -0.68
SUDS3-203ENST00000541591 MGAT4AQ9UM21 535 aa10.82□□□□□ -0.68
SUDS3-203ENST00000541591 TENM3Q9P273 2699 aa10.81□□□□□ -0.68
SUDS3-203ENST00000541591 RAB27BO00194 218 aa10.81□□□□□ -0.68
SUDS3-203ENST00000541591 PDCD5O14737 125 aa10.81□□□□□ -0.68
SUDS3-203ENST00000541591 RBBP9O75884 186 aa10.81□□□□□ -0.68
SUDS3-203ENST00000541591 HIST1H1DP16402 221 aaKnown RBP10.81□□□□□ -0.68
SUDS3-203ENST00000541591 RAB3BP20337 219 aa10.81□□□□□ -0.68
SUDS3-203ENST00000541591 PSMB9P28065 219 aa10.81□□□□□ -0.68
SUDS3-203ENST00000541591 SRSF7Q16629 238 aaKnown RBP eCLIP10.81□□□□□ -0.68
SUDS3-203ENST00000541591 IDO2Q6ZQW0 420 aa10.81□□□□□ -0.68
SUDS3-203ENST00000541591 PDPNQ86YL7 162 aa10.81□□□□□ -0.68
SUDS3-203ENST00000541591 OR10J5Q8NHC4 309 aa10.81□□□□□ -0.68
SUDS3-203ENST00000541591 FLYWCH2Q96CP2 140 aaKnown RBP10.81□□□□□ -0.68
SUDS3-203ENST00000541591 HARBI1Q96MB7 349 aa10.81□□□□□ -0.68
SUDS3-203ENST00000541591 WWC2-AS2Q96NR7 200 aa10.81□□□□□ -0.68
SUDS3-203ENST00000541591 TSNAXQ99598 290 aaKnown RBP10.81□□□□□ -0.68
SUDS3-203ENST00000541591 CABLES2Q9BTV7 478 aa10.81□□□□□ -0.68
SUDS3-203ENST00000541591 VCX3BQ9H321 246 aa10.81□□□□□ -0.68
SUDS3-203ENST00000541591 RBM7Q9Y580 266 aaKnown RBP10.81□□□□□ -0.68
SUDS3-203ENST00000541591 U3KQK5 164 aa10.81□□□□□ -0.68
SUDS3-203ENST00000541591 TRDV1A0A1B0GX56 115 aa10.8□□□□□ -0.68
SUDS3-203ENST00000541591 TRIM64CA6NLI5 447 aa10.8□□□□□ -0.68
SUDS3-203ENST00000541591 CNIH1O95406 144 aa10.8□□□□□ -0.68
SUDS3-203ENST00000541591 GADD45AP24522 165 aa10.8□□□□□ -0.68
SUDS3-203ENST00000541591 OR2B11Q5JQS5 317 aa10.8□□□□□ -0.68
SUDS3-203ENST00000541591 CD200R1LQ6Q8B3 271 aa10.8□□□□□ -0.68
SUDS3-203ENST00000541591 GINS4Q9BRT9 223 aa10.8□□□□□ -0.68
SUDS3-203ENST00000541591 RSRP1Q9BUV0 290 aa10.8□□□□□ -0.68
SUDS3-203ENST00000541591 RNF167Q9H6Y7 350 aa10.8□□□□□ -0.68
SUDS3-203ENST00000541591 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.8□□□□□ -0.68
SUDS3-203ENST00000541591 BLOC1S6Q9UL45 172 aa10.8□□□□□ -0.68
SUDS3-203ENST00000541591 TRBV6-7A0A0A0MS04 114 aa10.79□□□□□ -0.68
SUDS3-203ENST00000541591 TRAV1-2A0A0B4J238 106 aa10.79□□□□□ -0.68
SUDS3-203ENST00000541591 SRRM4A7MD48 611 aaKnown RBP10.79□□□□□ -0.68
SUDS3-203ENST00000541591 LINC00473A8K010 186 aa10.79□□□□□ -0.68
SUDS3-203ENST00000541591 SHOXO15266 292 aa10.79□□□□□ -0.68
SUDS3-203ENST00000541591 TALDO1P37837 337 aa10.79□□□□□ -0.68
SUDS3-203ENST00000541591 PITPNAQ00169 270 aa10.79□□□□□ -0.68
SUDS3-203ENST00000541591 TMEM267Q0VDI3 215 aaPredicted RBP10.79□□□□□ -0.68
SUDS3-203ENST00000541591 ZNF562Q6V9R5 426 aa10.79□□□□□ -0.68
SUDS3-203ENST00000541591 NUDCD2Q8WVJ2 157 aa10.79□□□□□ -0.68
SUDS3-203ENST00000541591 TXNL4BQ9NX01 149 aaKnown RBP10.79□□□□□ -0.68
SUDS3-203ENST00000541591 ZMAT5Q9UDW3 170 aaKnown RBP10.79□□□□□ -0.68
SUDS3-203ENST00000541591 DYNC2H1Q8NCM8 4307 aaKnown RBP10.79□□□□□ -0.68
SUDS3-203ENST00000541591 RBMXL2O75526 392 aaKnown RBP10.78□□□□□ -0.68
SUDS3-203ENST00000541591 SPDEFO95238 335 aa10.78□□□□□ -0.68
SUDS3-203ENST00000541591 ATP6V1G2O95670 118 aa10.78□□□□□ -0.68
SUDS3-203ENST00000541591 CRYZL1O95825 349 aa10.78□□□□□ -0.68
SUDS3-203ENST00000541591 TRBV12-3P01733 135 aa10.78□□□□□ -0.68
SUDS3-203ENST00000541591 HSPB1P04792 205 aaKnown RBP10.78□□□□□ -0.68
SUDS3-203ENST00000541591 FCER2P06734 321 aa10.78□□□□□ -0.68
SUDS3-203ENST00000541591 CRYGBP07316 175 aa10.78□□□□□ -0.68
SUDS3-203ENST00000541591 CLEC2LP0C7M8 214 aa10.78□□□□□ -0.68
SUDS3-203ENST00000541591 GP9P14770 177 aa10.78□□□□□ -0.68
SUDS3-203ENST00000541591 HSPA13P48723 471 aa10.78□□□□□ -0.68
SUDS3-203ENST00000541591 PSMD7P51665 324 aa10.78□□□□□ -0.68
SUDS3-203ENST00000541591 DCTN2Q13561 401 aaKnown RBP10.78□□□□□ -0.68
SUDS3-203ENST00000541591 MRGPRG-AS1Q2M3A8 158 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms