RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 MRPL28Q13084 256 aaKnown RBP8.79□□□□□ -1
COPA-205ENST00000541366 EXOSC2Q13868 293 aaKnown RBP8.79□□□□□ -1
COPA-205ENST00000541366 MRGPRG-AS1Q2M3A8 158 aa8.79□□□□□ -1
COPA-205ENST00000541366 DEFB135Q30KP9 77 aa8.79□□□□□ -1
COPA-205ENST00000541366 SLC16A13Q7RTY0 426 aa8.79□□□□□ -1
COPA-205ENST00000541366 TMEM61Q8N0U2 210 aa8.79□□□□□ -1
COPA-205ENST00000541366 ADAD2Q8NCV1 583 aaKnown RBP8.79□□□□□ -1
COPA-205ENST00000541366 KCNG3Q8TAE7 436 aa8.79□□□□□ -1
COPA-205ENST00000541366 FAAP24Q9BTP7 215 aa8.79□□□□□ -1
COPA-205ENST00000541366 KRTAP4-5Q9BYR2 181 aa8.79□□□□□ -1
COPA-205ENST00000541366 ABRACLQ9P1F3 81 aa8.79□□□□□ -1
COPA-205ENST00000541366 ZNF230Q9UIE0 474 aaPredicted RBP8.79□□□□□ -1
COPA-205ENST00000541366 AP4S1Q9Y587 144 aa8.79□□□□□ -1
COPA-205ENST00000541366 FAM90A7PA6NKC0 464 aa8.78□□□□□ -1
COPA-205ENST00000541366 SPRY2O43597 315 aa8.78□□□□□ -1
COPA-205ENST00000541366 SCAF4O95104 1147 aaKnown RBP8.78□□□□□ -1
COPA-205ENST00000541366 NDUFB8O95169 186 aa8.78□□□□□ -1
COPA-205ENST00000541366 LALBAP00709 142 aa8.78□□□□□ -1
COPA-205ENST00000541366 GLAP06280 429 aa8.78□□□□□ -1
COPA-205ENST00000541366 OR2G6Q5TZ20 316 aa8.78□□□□□ -1
COPA-205ENST00000541366 RPL22L1Q6P5R6 122 aaKnown RBP8.78□□□□□ -1
COPA-205ENST00000541366 C6orf201Q7Z4U5 140 aa8.78□□□□□ -1
COPA-205ENST00000541366 WFDC3Q8IUB2 231 aa8.78□□□□□ -1
COPA-205ENST00000541366 SVOPQ8N4V2 548 aa8.78□□□□□ -1
COPA-205ENST00000541366 OR52B4Q8NGK2 314 aa8.78□□□□□ -1
COPA-205ENST00000541366 SETD6Q8TBK2 473 aa8.78□□□□□ -1
COPA-205ENST00000541366 SLC7A6OSQ96CW6 309 aaPredicted RBP8.78□□□□□ -1
COPA-205ENST00000541366 DMRT1Q9Y5R6 373 aa8.78□□□□□ -1
COPA-205ENST00000541366 TRBV5-5A0A0J9YX44 114 aa8.77□□□□□ -1.01
COPA-205ENST00000541366 OR2C1O95371 312 aa8.77□□□□□ -1.01
COPA-205ENST00000541366 CEACAM6P40199 344 aa8.77□□□□□ -1.01
COPA-205ENST00000541366 RPS11P62280 158 aaKnown RBP eCLIP8.77□□□□□ -1.01
COPA-205ENST00000541366 DNAL1Q4LDG9 190 aa8.77□□□□□ -1.01
COPA-205ENST00000541366 TM4SF20Q53R12 229 aa8.77□□□□□ -1.01
COPA-205ENST00000541366 OR10K2Q6IF99 312 aa8.77□□□□□ -1.01
COPA-205ENST00000541366 CCDC197Q8NCU1 140 aa8.77□□□□□ -1.01
COPA-205ENST00000541366 PHB2Q99623 299 aa8.77□□□□□ -1.01
COPA-205ENST00000541366 MLXQ9UH92 298 aa8.77□□□□□ -1.01
COPA-205ENST00000541366 LRRC42Q9Y546 428 aa8.77□□□□□ -1.01
COPA-205ENST00000541366 PKD1P98161 4303 aa8.77□□□□□ -1.01
COPA-205ENST00000541366 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.76□□□□□ -1.01
COPA-205ENST00000541366 SNTNA6NMZ2 147 aa8.76□□□□□ -1.01
COPA-205ENST00000541366 SRRM4A7MD48 611 aaKnown RBP8.76□□□□□ -1.01
COPA-205ENST00000541366 APOA2P02652 100 aa8.76□□□□□ -1.01
COPA-205ENST00000541366 ALPLP05186 524 aa8.76□□□□□ -1.01
COPA-205ENST00000541366 OR9G9P0C7N8 305 aa8.76□□□□□ -1.01
COPA-205ENST00000541366 CBLN1P23435 193 aa8.76□□□□□ -1.01
COPA-205ENST00000541366 BMI1P35226 326 aa8.76□□□□□ -1.01
COPA-205ENST00000541366 ETV1P50549 477 aa8.76□□□□□ -1.01
COPA-205ENST00000541366 ATP5G2Q06055 141 aa8.76□□□□□ -1.01
COPA-205ENST00000541366 LCE2CQ5TA81 110 aa8.76□□□□□ -1.01
COPA-205ENST00000541366 ZNF880Q6PDB4 577 aa8.76□□□□□ -1.01
COPA-205ENST00000541366 C19orf35Q6ZS72 473 aa8.76□□□□□ -1.01
COPA-205ENST00000541366 PDPNQ86YL7 162 aa8.76□□□□□ -1.01
COPA-205ENST00000541366 ZFP41Q8N8Y5 198 aa8.76□□□□□ -1.01
COPA-205ENST00000541366 TMEM68Q96MH6 324 aa8.76□□□□□ -1.01
COPA-205ENST00000541366 MYCBPQ99417 103 aaPredicted RBP8.76□□□□□ -1.01
COPA-205ENST00000541366 HDHD3Q9BSH5 251 aaPredicted RBP8.76□□□□□ -1.01
COPA-205ENST00000541366 KCNK15Q9H427 330 aa8.76□□□□□ -1.01
COPA-205ENST00000541366 SLC35D1Q9NTN3 355 aa8.76□□□□□ -1.01
COPA-205ENST00000541366 TECRQ9NZ01 308 aaKnown RBP8.76□□□□□ -1.01
COPA-205ENST00000541366 A0A1B0GVY2 172 aa8.75□□□□□ -1.01
COPA-205ENST00000541366 M0R1X1 148 aa8.75□□□□□ -1.01
COPA-205ENST00000541366 OGG1O15527 345 aa8.75□□□□□ -1.01
COPA-205ENST00000541366 NAPSAO96009 420 aa8.75□□□□□ -1.01
COPA-205ENST00000541366 IGHV3-23P01764 117 aa8.75□□□□□ -1.01
COPA-205ENST00000541366 CCDC58Q4VC31 144 aa8.75□□□□□ -1.01
COPA-205ENST00000541366 ZNF57Q68EA5 555 aaPredicted RBP8.75□□□□□ -1.01
COPA-205ENST00000541366 Q6ZWC4 215 aa8.75□□□□□ -1.01
COPA-205ENST00000541366 SMIM19Q96E16 107 aa8.75□□□□□ -1.01
COPA-205ENST00000541366 CENPNQ96H22 339 aaPredicted RBP8.75□□□□□ -1.01
COPA-205ENST00000541366 HARBI1Q96MB7 349 aa8.75□□□□□ -1.01
COPA-205ENST00000541366 NEDD4LQ96PU5 975 aa8.75□□□□□ -1.01
COPA-205ENST00000541366 NICN1Q9BSH3 213 aa8.75□□□□□ -1.01
COPA-205ENST00000541366 CHMP1AQ9HD42 196 aaPredicted RBP8.75□□□□□ -1.01
COPA-205ENST00000541366 TP53TG1Q9Y2A0 90 aa8.75□□□□□ -1.01
COPA-205ENST00000541366 S4R3C0 116 aa8.75□□□□□ -1.01
COPA-205ENST00000541366 HSPG2P98160 4391 aa8.75□□□□□ -1.01
COPA-205ENST00000541366 TRBV5-7A0A0A0MS05 114 aa8.74□□□□□ -1.01
COPA-205ENST00000541366 TRBV9A0A0B4J1U6 114 aa8.74□□□□□ -1.01
COPA-205ENST00000541366 TMEM213A2RRL7 107 aa8.74□□□□□ -1.01
COPA-205ENST00000541366 DYNC1I1O14576 645 aa8.74□□□□□ -1.01
COPA-205ENST00000541366 EI24O14681 340 aa8.74□□□□□ -1.01
COPA-205ENST00000541366 ITGB1BP1O14713 200 aa8.74□□□□□ -1.01
COPA-205ENST00000541366 MPPED1O15442 326 aa8.74□□□□□ -1.01
COPA-205ENST00000541366 TUSC2O75896 110 aa8.74□□□□□ -1.01
COPA-205ENST00000541366 OR2J3O76001 311 aa8.74□□□□□ -1.01
COPA-205ENST00000541366 SCTP09683 121 aa8.74□□□□□ -1.01
COPA-205ENST00000541366 MED14OSP0DP75 135 aa8.74□□□□□ -1.01
COPA-205ENST00000541366 HTR2CP28335 458 aa8.74□□□□□ -1.01
COPA-205ENST00000541366 NANOS2P60321 138 aaKnown RBP8.74□□□□□ -1.01
COPA-205ENST00000541366 TNXAQ16473 311 aa8.74□□□□□ -1.01
COPA-205ENST00000541366 Q499Y3 187 aa8.74□□□□□ -1.01
COPA-205ENST00000541366 BTNL8Q6UX41 500 aa8.74□□□□□ -1.01
COPA-205ENST00000541366 IDO2Q6ZQW0 420 aa8.74□□□□□ -1.01
COPA-205ENST00000541366 UXS1Q8NBZ7 420 aa8.74□□□□□ -1.01
COPA-205ENST00000541366 RHOXF1Q8NHV9 184 aa8.74□□□□□ -1.01
COPA-205ENST00000541366 SRSF12Q8WXF0 261 aaKnown RBP8.74□□□□□ -1.01
COPA-205ENST00000541366 THRSPQ92748 146 aa8.74□□□□□ -1.01
COPA-205ENST00000541366 RNF183Q96D59 192 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms