RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 HIF1ANQ9NWT6 349 aa13.13□□□□□ -0.31
TRAF3-204ENST00000539721 PRELID3BQ9Y3B1 194 aa13.13□□□□□ -0.31
TRAF3-204ENST00000539721 TMEM56-RWDD3S4R434 201 aa13.13□□□□□ -0.31
TRAF3-204ENST00000539721 PDZD2O15018 2839 aa13.13□□□□□ -0.31
TRAF3-204ENST00000539721 A0A1W2PRD5 423 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 A0A1W2PRF3 423 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 A0A1W2PRM7 423 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 ODF3BA8MYP8 253 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 REG1BP48304 166 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 DIAPH2-AS1Q14236 149 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 SELENOHQ8IZQ5 122 aaKnown RBP13.12□□□□□ -0.31
TRAF3-204ENST00000539721 OR5M8Q8NGP6 311 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 ST6GALNAC6Q969X2 333 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 C18orf12Q96KH6 178 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 MRPL20Q9BYC9 149 aaKnown RBP13.12□□□□□ -0.31
TRAF3-204ENST00000539721 ZNF436Q9C0F3 470 aaPredicted RBP13.12□□□□□ -0.31
TRAF3-204ENST00000539721 PRRC2AP48634 2157 aaKnown RBP13.12□□□□□ -0.31
TRAF3-204ENST00000539721 FAM25EA8MYX2 175 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 RAMP3O60896 148 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 FCGR3BO75015 233 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 CT45A6P0DMU7 189 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 CT45A5P0DMU8 189 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 CT45A7P0DMV0 189 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 IGHV4-31P0DP07 118 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 KIR2DS2P43631 304 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 LPAR6P43657 344 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 ZNF816Q0VGE8 651 aaPredicted RBP13.12□□□□□ -0.31
TRAF3-204ENST00000539721 TMEM249Q2WGJ8 235 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 ZNF585BQ52M93 769 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 LYZL2Q7Z4W2 148 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 TGIF2LXQ8IUE1 241 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 SLC35G3Q8N808 338 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 ZNF383Q8NA42 475 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 RBPMSQ93062 196 aaKnown RBP13.12□□□□□ -0.31
TRAF3-204ENST00000539721 IL22RA2Q969J5 263 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 CHIAQ9BZP6 476 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 RANGRFQ9HD47 186 aaPredicted RBP13.12□□□□□ -0.31
TRAF3-204ENST00000539721 FAM212BQ9NTI7 297 aaPredicted RBP13.12□□□□□ -0.31
TRAF3-204ENST00000539721 AUP1Q9Y679 476 aa13.12□□□□□ -0.31
TRAF3-204ENST00000539721 C13orf42A0A1B0GVH6 325 aa13.11□□□□□ -0.31
TRAF3-204ENST00000539721 C5orf51A6NDU8 294 aa13.11□□□□□ -0.31
TRAF3-204ENST00000539721 IFNA21P01568 189 aa13.11□□□□□ -0.31
TRAF3-204ENST00000539721 RPA2P15927 270 aa13.11□□□□□ -0.31
TRAF3-204ENST00000539721 HLA-GP17693 338 aa13.11□□□□□ -0.31
TRAF3-204ENST00000539721 GATA3P23771 443 aa13.11□□□□□ -0.31
TRAF3-204ENST00000539721 HTR1DP28221 377 aa13.11□□□□□ -0.31
TRAF3-204ENST00000539721 GZMKP49863 264 aa13.11□□□□□ -0.31
TRAF3-204ENST00000539721 BRWD1-AS2P59051 145 aa13.11□□□□□ -0.31
TRAF3-204ENST00000539721 CD300CQ08708 224 aa13.11□□□□□ -0.31
TRAF3-204ENST00000539721 GSG1LQ6UXU4 331 aa13.11□□□□□ -0.31
TRAF3-204ENST00000539721 CD300LFQ8TDQ1 290 aa13.11□□□□□ -0.31
TRAF3-204ENST00000539721 DDB2Q92466 427 aa13.11□□□□□ -0.31
TRAF3-204ENST00000539721 RPEQ96AT9 228 aa13.11□□□□□ -0.31
TRAF3-204ENST00000539721 ST6GAL2Q96JF0 529 aa13.11□□□□□ -0.31
TRAF3-204ENST00000539721 C7orf69Q9H7B7 122 aa13.11□□□□□ -0.31
TRAF3-204ENST00000539721 ITPR2Q14571 2701 aa13.1□□□□□ -0.31
TRAF3-204ENST00000539721 PIGBOS1A0A0B4J2F0 54 aa13.1□□□□□ -0.31
TRAF3-204ENST00000539721 LEUTXA8MZ59 168 aa13.1□□□□□ -0.31
TRAF3-204ENST00000539721 TGFAP01135 160 aa13.1□□□□□ -0.31
TRAF3-204ENST00000539721 GAPDHP04406 335 aaKnown RBP13.1□□□□□ -0.31
TRAF3-204ENST00000539721 CEACAM3P40198 252 aa13.1□□□□□ -0.31
TRAF3-204ENST00000539721 UBE2E1P51965 193 aa13.1□□□□□ -0.31
TRAF3-204ENST00000539721 LGALS4P56470 323 aa13.1□□□□□ -0.31
TRAF3-204ENST00000539721 H2BFSP57053 126 aa13.1□□□□□ -0.31
TRAF3-204ENST00000539721 GGNBP1Q5YKI7 109 aa13.1□□□□□ -0.31
TRAF3-204ENST00000539721 NABP2Q9BQ15 211 aa13.1□□□□□ -0.31
TRAF3-204ENST00000539721 PDCD10Q9BUL8 212 aa13.1□□□□□ -0.31
TRAF3-204ENST00000539721 DPM3Q9P2X0 92 aa13.1□□□□□ -0.31
TRAF3-204ENST00000539721 DUXBA0A1W2PPF3 345 aa13.09□□□□□ -0.31
TRAF3-204ENST00000539721 S1PR2O95136 353 aa13.09□□□□□ -0.31
TRAF3-204ENST00000539721 IGKV1-39P01597 117 aa13.09□□□□□ -0.31
TRAF3-204ENST00000539721 APOA2P02652 100 aa13.09□□□□□ -0.31
TRAF3-204ENST00000539721 IGKV1D-39P04432 117 aa13.09□□□□□ -0.31
TRAF3-204ENST00000539721 TPTE2P1Q5T6R2 138 aa13.09□□□□□ -0.31
TRAF3-204ENST00000539721 OR4S2Q8NH73 311 aa13.09□□□□□ -0.31
TRAF3-204ENST00000539721 FYTTD1Q96QD9 318 aaKnown RBP13.09□□□□□ -0.31
TRAF3-204ENST00000539721 SLC35D1Q9NTN3 355 aa13.09□□□□□ -0.31
TRAF3-204ENST00000539721 TMED3Q9Y3Q3 217 aa13.09□□□□□ -0.31
TRAF3-204ENST00000539721 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.09□□□□□ -0.318e-8■■■■■ 31.6
TRAF3-204ENST00000539721 MAP1AP78559 2803 aaPredicted RBP13.09□□□□□ -0.31
TRAF3-204ENST00000539721 MPTX1A8MV57 137 aa13.09□□□□□ -0.31
TRAF3-204ENST00000539721 LY6LH3BQJ8 138 aa13.09□□□□□ -0.31
TRAF3-204ENST00000539721 RBFOX2O43251 390 aaKnown RBP eCLIP13.09□□□□□ -0.31
TRAF3-204ENST00000539721 TXNL1O43396 289 aa13.09□□□□□ -0.31
TRAF3-204ENST00000539721 GIPP09681 153 aaPredicted RBP13.09□□□□□ -0.31
TRAF3-204ENST00000539721 LHFPL4Q7Z7J7 247 aa13.09□□□□□ -0.31
TRAF3-204ENST00000539721 RNASE11Q8TAA1 199 aaKnown RBP13.09□□□□□ -0.31
TRAF3-204ENST00000539721 ITGB1BP2Q9UKP3 347 aa13.09□□□□□ -0.31
TRAF3-204ENST00000539721 CSMD1Q96PZ7 3565 aa13.09□□□□□ -0.31
TRAF3-204ENST00000539721 CENPVL3A0A0U1RRI6 287 aa13.08□□□□□ -0.32
TRAF3-204ENST00000539721 HPRT1P00492 218 aa13.08□□□□□ -0.32
TRAF3-204ENST00000539721 AKR1C2P52895 323 aa13.08□□□□□ -0.32
TRAF3-204ENST00000539721 TAGLNQ01995 201 aaKnown RBP13.08□□□□□ -0.32
TRAF3-204ENST00000539721 RTL8BQ17RB0 113 aa13.08□□□□□ -0.32
TRAF3-204ENST00000539721 LDLRAD2Q5SZI1 272 aa13.08□□□□□ -0.32
TRAF3-204ENST00000539721 MINOS1Q5TGZ0 78 aa13.08□□□□□ -0.32
TRAF3-204ENST00000539721 SEC22AQ96IW7 307 aa13.08□□□□□ -0.32
TRAF3-204ENST00000539721 OR10C1Q96KK4 312 aa13.08□□□□□ -0.32
TRAF3-204ENST00000539721 TBL2Q9Y4P3 447 aaKnown RBP13.08□□□□□ -0.32
TRAF3-204ENST00000539721 MINOS1-NBL1R4GNA1 71 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms