RNA–Protein interactions for RNA: ENST00000536003.5

PAAF1-207, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-207ENST00000536003 ELF5Q9UKW6 265 aaPredicted RBP11.89□□□□□ -0.51
PAAF1-207ENST00000536003 FOXA2Q9Y261 457 aaPredicted RBP11.89□□□□□ -0.51
PAAF1-207ENST00000536003 LSM4Q9Y4Z0 139 aaKnown RBP11.89□□□□□ -0.51
PAAF1-207ENST00000536003 TRAV1-2A0A0B4J238 106 aa11.88□□□□□ -0.51
PAAF1-207ENST00000536003 RAB27BO00194 218 aa11.88□□□□□ -0.51
PAAF1-207ENST00000536003 FABP7O15540 132 aa11.88□□□□□ -0.51
PAAF1-207ENST00000536003 RBBP9O75884 186 aa11.88□□□□□ -0.51
PAAF1-207ENST00000536003 GSTT2P0CG29 244 aa11.88□□□□□ -0.51
PAAF1-207ENST00000536003 GSTT2BP0CG30 244 aa11.88□□□□□ -0.51
PAAF1-207ENST00000536003 SLURP1P55000 103 aa11.88□□□□□ -0.51
PAAF1-207ENST00000536003 C22orf42Q6IC83 251 aa11.88□□□□□ -0.51
PAAF1-207ENST00000536003 OR4A4PQ8NGN8 299 aa11.88□□□□□ -0.51
PAAF1-207ENST00000536003 OR10R2Q8NGX6 335 aa11.88□□□□□ -0.51
PAAF1-207ENST00000536003 CABLES2Q9BTV7 478 aa11.88□□□□□ -0.51
PAAF1-207ENST00000536003 OR2D2Q9H210 308 aa11.88□□□□□ -0.51
PAAF1-207ENST00000536003 GHITMQ9H3K2 345 aa11.88□□□□□ -0.51
PAAF1-207ENST00000536003 RAB22AQ9UL26 194 aa11.88□□□□□ -0.51
PAAF1-207ENST00000536003 BLOC1S6Q9UL45 172 aa11.88□□□□□ -0.51
PAAF1-207ENST00000536003 NUBP2Q9Y5Y2 271 aa11.88□□□□□ -0.51
PAAF1-207ENST00000536003 DNAH7Q8WXX0 4024 aa11.88□□□□□ -0.51
PAAF1-207ENST00000536003 HUWE1Q7Z6Z7 4374 aaKnown RBP11.87□□□□□ -0.51
PAAF1-207ENST00000536003 IGKV1D-8A0A087WSZ0 117 aa11.87□□□□□ -0.51
PAAF1-207ENST00000536003 M0R1X1 148 aa11.87□□□□□ -0.51
PAAF1-207ENST00000536003 SLC25A17O43808 307 aa11.87□□□□□ -0.51
PAAF1-207ENST00000536003 RAMP3O60896 148 aa11.87□□□□□ -0.51
PAAF1-207ENST00000536003 PPP1R27Q86WC6 154 aa11.87□□□□□ -0.51
PAAF1-207ENST00000536003 LFNGQ8NES3 379 aa11.87□□□□□ -0.51
PAAF1-207ENST00000536003 DCUN1D4Q92564 292 aa11.87□□□□□ -0.51
PAAF1-207ENST00000536003 YTHDF1Q9BYJ9 559 aaKnown RBP11.87□□□□□ -0.51
PAAF1-207ENST00000536003 TOLLIPQ9H0E2 274 aa11.87□□□□□ -0.51
PAAF1-207ENST00000536003 ZNF221Q9UK13 617 aa11.87□□□□□ -0.51
PAAF1-207ENST00000536003 IGHV4OR15-8A0A075B7B6 117 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 A0A087WW49 117 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 A0A087WXM4 84 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 TRBV6-7A0A0A0MS04 114 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 TRDV1A0A1B0GX56 115 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 ARPC1BO15143 372 aaKnown RBP11.86□□□□□ -0.51
PAAF1-207ENST00000536003 IGLV2-23P01705 113 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 IGHV3-11P01762 117 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 OR8U9P0C7N5 309 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 HIST1H1DP16402 221 aaKnown RBP11.86□□□□□ -0.51
PAAF1-207ENST00000536003 RAB3BP20337 219 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 MYL9P24844 172 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 PSMD7P51665 324 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 ACTBL2Q562R1 376 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 UNQ5815/PRO19632Q6UWF5 114 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 PDPNQ86YL7 162 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 DLX4Q92988 240 aaPredicted RBP11.86□□□□□ -0.51
PAAF1-207ENST00000536003 MS4A10Q96PG2 267 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 SDHAF2Q9NX18 166 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 TNCP24821 2201 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 PDCD5O14737 125 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 SPDEFO95238 335 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 LGALS1P09382 135 aaKnown RBP11.86□□□□□ -0.51
PAAF1-207ENST00000536003 GABARAPL2P60520 117 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 RPS16P62249 146 aaKnown RBP11.86□□□□□ -0.51
PAAF1-207ENST00000536003 MRPS15P82914 257 aaKnown RBP11.86□□□□□ -0.51
PAAF1-207ENST00000536003 PJVKQ0ZLH3 352 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 ZNF562Q6V9R5 426 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 TCTEX1D1Q8N7M0 179 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 GRPEL2Q8TAA5 225 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 ARPC1AQ92747 370 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 RNF5Q99942 180 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 SLC35D1Q9NTN3 355 aa11.86□□□□□ -0.51
PAAF1-207ENST00000536003 ZNF256Q9Y2P7 627 aaPredicted RBP11.86□□□□□ -0.51
PAAF1-207ENST00000536003 APOA2P02652 100 aa11.85□□□□□ -0.51
PAAF1-207ENST00000536003 DEFA5Q01523 94 aa11.85□□□□□ -0.51
PAAF1-207ENST00000536003 AKIRIN2Q53H80 203 aa11.85□□□□□ -0.51
PAAF1-207ENST00000536003 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.85□□□□□ -0.51
PAAF1-207ENST00000536003 OR10J5Q8NHC4 309 aa11.85□□□□□ -0.51
PAAF1-207ENST00000536003 PTTG2Q9NZH5 202 aa11.85□□□□□ -0.51
PAAF1-207ENST00000536003 CEPT1Q9Y6K0 416 aa11.85□□□□□ -0.51
PAAF1-207ENST00000536003 LINC01619G3V211 115 aa11.84□□□□□ -0.51
PAAF1-207ENST00000536003 OVOL1O14753 267 aa11.84□□□□□ -0.51
PAAF1-207ENST00000536003 RAB6AP20340 208 aa11.84□□□□□ -0.51
PAAF1-207ENST00000536003 GADD45AP24522 165 aa11.84□□□□□ -0.51
PAAF1-207ENST00000536003 SERPINB10P48595 397 aa11.84□□□□□ -0.51
PAAF1-207ENST00000536003 TPPP2P59282 170 aa11.84□□□□□ -0.51
PAAF1-207ENST00000536003 UBE2UQ5VVX9 321 aa11.84□□□□□ -0.51
PAAF1-207ENST00000536003 SPARTQ8N0X7 666 aa11.84□□□□□ -0.51
PAAF1-207ENST00000536003 FLYWCH2Q96CP2 140 aaKnown RBP11.84□□□□□ -0.51
PAAF1-207ENST00000536003 TSNAXQ99598 290 aaKnown RBP11.84□□□□□ -0.51
PAAF1-207ENST00000536003 ZMAT5Q9UDW3 170 aaKnown RBP11.84□□□□□ -0.51
PAAF1-207ENST00000536003 SRRM4A7MD48 611 aaKnown RBP11.83□□□□□ -0.52
PAAF1-207ENST00000536003 SAP30O75446 220 aa11.83□□□□□ -0.52
PAAF1-207ENST00000536003 PSMB9P28065 219 aa11.83□□□□□ -0.52
PAAF1-207ENST00000536003 DCTN2Q13561 401 aaKnown RBP11.83□□□□□ -0.52
PAAF1-207ENST00000536003 FXYD3Q14802 87 aa11.83□□□□□ -0.52
PAAF1-207ENST00000536003 MRGPRG-AS1Q2M3A8 158 aa11.83□□□□□ -0.52
PAAF1-207ENST00000536003 PYHIN1Q6K0P9 492 aa11.83□□□□□ -0.52
PAAF1-207ENST00000536003 HARBI1Q96MB7 349 aa11.83□□□□□ -0.52
PAAF1-207ENST00000536003 VCX3AQ9NNX9 186 aa11.83□□□□□ -0.52
PAAF1-207ENST00000536003 TXNL4BQ9NX01 149 aaKnown RBP11.83□□□□□ -0.52
PAAF1-207ENST00000536003 CCDC160A6NGH7 325 aa11.82□□□□□ -0.52
PAAF1-207ENST00000536003 CRYGBP07316 175 aa11.82□□□□□ -0.52
PAAF1-207ENST00000536003 TMEM267Q0VDI3 215 aaPredicted RBP11.82□□□□□ -0.52
PAAF1-207ENST00000536003 H1FOOQ8IZA3 346 aaPredicted RBP11.82□□□□□ -0.52
PAAF1-207ENST00000536003 ATG5Q9H1Y0 275 aa11.82□□□□□ -0.52
PAAF1-207ENST00000536003 LINC00473A8K010 186 aa11.82□□□□□ -0.52
PAAF1-207ENST00000536003 DIRAS3O95661 229 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms