RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 YTHDF1Q9BYJ9 559 aaKnown RBP8.4□□□□□ -1.06
CCDC60-202ENST00000535685 OR1A1Q9P1Q5 309 aa8.4□□□□□ -1.06
CCDC60-202ENST00000535685 VSIG4Q9Y279 399 aa8.4□□□□□ -1.06
CCDC60-202ENST00000535685 TENM3Q9P273 2699 aa8.4□□□□□ -1.07
CCDC60-202ENST00000535685 G3V318 75 aa8.39□□□□□ -1.07
CCDC60-202ENST00000535685 MFNGO00587 321 aa8.39□□□□□ -1.07
CCDC60-202ENST00000535685 HSPA12AO43301 675 aa8.39□□□□□ -1.07
CCDC60-202ENST00000535685 EGR2P11161 476 aaPredicted RBP8.39□□□□□ -1.07
CCDC60-202ENST00000535685 MYL9P24844 172 aa8.39□□□□□ -1.07
CCDC60-202ENST00000535685 FGF9P31371 208 aaPredicted RBP8.39□□□□□ -1.07
CCDC60-202ENST00000535685 RAB9AP51151 201 aa8.39□□□□□ -1.07
CCDC60-202ENST00000535685 INSL3P51460 131 aa8.39□□□□□ -1.07
CCDC60-202ENST00000535685 LUMP51884 338 aaPredicted RBP8.39□□□□□ -1.07
CCDC60-202ENST00000535685 CX3CL1P78423 397 aa8.39□□□□□ -1.07
CCDC60-202ENST00000535685 DGCR2P98153 550 aa8.39□□□□□ -1.07
CCDC60-202ENST00000535685 NDPQ00604 133 aa8.39□□□□□ -1.07
CCDC60-202ENST00000535685 TMEM267Q0VDI3 215 aaPredicted RBP8.39□□□□□ -1.07
CCDC60-202ENST00000535685 ARL6IP1Q15041 203 aa8.39□□□□□ -1.07
CCDC60-202ENST00000535685 AKIRIN2Q53H80 203 aa8.39□□□□□ -1.07
CCDC60-202ENST00000535685 UBE2UQ5VVX9 321 aa8.39□□□□□ -1.07
CCDC60-202ENST00000535685 TMEM65Q6PI78 240 aa8.39□□□□□ -1.07
CCDC60-202ENST00000535685 ZNF562Q6V9R5 426 aa8.39□□□□□ -1.07
CCDC60-202ENST00000535685 PDPNQ86YL7 162 aa8.39□□□□□ -1.07
CCDC60-202ENST00000535685 OR10R2Q8NGX6 335 aa8.39□□□□□ -1.07
CCDC60-202ENST00000535685 RAB3CQ96E17 227 aa8.39□□□□□ -1.07
CCDC60-202ENST00000535685 DUX3Q96PT4 197 aa8.39□□□□□ -1.07
CCDC60-202ENST00000535685 KLK15Q9H2R5 256 aa8.39□□□□□ -1.07
CCDC60-202ENST00000535685 FBXL15Q9H469 300 aa8.39□□□□□ -1.07
CCDC60-202ENST00000535685 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.39□□□□□ -1.07
CCDC60-202ENST00000535685 ZNF221Q9UK13 617 aa8.39□□□□□ -1.07
CCDC60-202ENST00000535685 WSB1Q9Y6I7 421 aa8.39□□□□□ -1.07
CCDC60-202ENST00000535685 TRBV6-7A0A0A0MS04 114 aa8.38□□□□□ -1.07
CCDC60-202ENST00000535685 FABP7O15540 132 aa8.38□□□□□ -1.07
CCDC60-202ENST00000535685 TFAP2AP05549 437 aa8.38□□□□□ -1.07
CCDC60-202ENST00000535685 FCGR3AP08637 254 aa8.38□□□□□ -1.07
CCDC60-202ENST00000535685 CD3GP09693 182 aa8.38□□□□□ -1.07
CCDC60-202ENST00000535685 OR8U8P0C7N1 319 aa8.38□□□□□ -1.07
CCDC60-202ENST00000535685 HIST1H1DP16402 221 aaKnown RBP8.38□□□□□ -1.07
CCDC60-202ENST00000535685 RAB3BP20337 219 aa8.38□□□□□ -1.07
CCDC60-202ENST00000535685 GADD45AP24522 165 aa8.38□□□□□ -1.07
CCDC60-202ENST00000535685 PLA2G7Q13093 441 aa8.38□□□□□ -1.07
CCDC60-202ENST00000535685 PSG5Q15238 335 aa8.38□□□□□ -1.07
CCDC60-202ENST00000535685 DEFB136Q30KP8 78 aa8.38□□□□□ -1.07
CCDC60-202ENST00000535685 HES5Q5TA89 166 aa8.38□□□□□ -1.07
CCDC60-202ENST00000535685 PYHIN1Q6K0P9 492 aa8.38□□□□□ -1.07
CCDC60-202ENST00000535685 ZNF383Q8NA42 475 aa8.38□□□□□ -1.07
CCDC60-202ENST00000535685 OR11H1Q8NG94 326 aa8.38□□□□□ -1.07
CCDC60-202ENST00000535685 FCGR1BQ92637 280 aa8.38□□□□□ -1.07
CCDC60-202ENST00000535685 TSNAXQ99598 290 aaKnown RBP8.38□□□□□ -1.07
CCDC60-202ENST00000535685 B9D2Q9BPU9 175 aa8.38□□□□□ -1.07
CCDC60-202ENST00000535685 PARP11Q9NR21 331 aa8.38□□□□□ -1.07
CCDC60-202ENST00000535685 RDH8Q9NYR8 311 aa8.38□□□□□ -1.07
CCDC60-202ENST00000535685 SCOCQ9UIL1 159 aa8.38□□□□□ -1.07
CCDC60-202ENST00000535685 RNF150Q9ULK6 438 aa8.38□□□□□ -1.07
CCDC60-202ENST00000535685 FOXA2Q9Y261 457 aaPredicted RBP8.38□□□□□ -1.07
CCDC60-202ENST00000535685 FBXO7Q9Y3I1 522 aa8.38□□□□□ -1.07
CCDC60-202ENST00000535685 STAB2Q8WWQ8 2551 aa8.38□□□□□ -1.07
CCDC60-202ENST00000535685 METTL21EPA6NDL7 271 aa8.37□□□□□ -1.07
CCDC60-202ENST00000535685 H7C2Y5 167 aa8.37□□□□□ -1.07
CCDC60-202ENST00000535685 FCN1O00602 326 aa8.37□□□□□ -1.07
CCDC60-202ENST00000535685 ARPC1BO15143 372 aaKnown RBP8.37□□□□□ -1.07
CCDC60-202ENST00000535685 SOX15O60248 233 aa8.37□□□□□ -1.07
CCDC60-202ENST00000535685 APOA2P02652 100 aa8.37□□□□□ -1.07
CCDC60-202ENST00000535685 LGALS7P47929 136 aa8.37□□□□□ -1.07
CCDC60-202ENST00000535685 OR10A3P58181 314 aa8.37□□□□□ -1.07
CCDC60-202ENST00000535685 MRPS15P82914 257 aaKnown RBP8.37□□□□□ -1.07
CCDC60-202ENST00000535685 ZNF616Q08AN1 781 aa8.37□□□□□ -1.07
CCDC60-202ENST00000535685 MOGAT2Q3SYC2 334 aa8.37□□□□□ -1.07
CCDC60-202ENST00000535685 ASPHD1Q5U4P2 390 aa8.37□□□□□ -1.07
CCDC60-202ENST00000535685 GLDNQ6ZMI3 551 aaPredicted RBP8.37□□□□□ -1.07
CCDC60-202ENST00000535685 TPRA1Q86W33 373 aa8.37□□□□□ -1.07
CCDC60-202ENST00000535685 NR2C2APQ86WQ0 139 aa8.37□□□□□ -1.07
CCDC60-202ENST00000535685 SPARTQ8N0X7 666 aa8.37□□□□□ -1.07
CCDC60-202ENST00000535685 OR1N2Q8NGR9 330 aa8.37□□□□□ -1.07
CCDC60-202ENST00000535685 GNB4Q9HAV0 340 aa8.37□□□□□ -1.07
CCDC60-202ENST00000535685 LSM4Q9Y4Z0 139 aaKnown RBP8.37□□□□□ -1.07
CCDC60-202ENST00000535685 NOTOA8MTQ0 251 aa8.36□□□□□ -1.07
CCDC60-202ENST00000535685 SEC14L6B5MCN3 397 aa8.36□□□□□ -1.07
CCDC60-202ENST00000535685 H3BUA1 57 aa8.36□□□□□ -1.07
CCDC60-202ENST00000535685 BRI3O95415 125 aa8.36□□□□□ -1.07
CCDC60-202ENST00000535685 ATP6V1G2O95670 118 aa8.36□□□□□ -1.07
CCDC60-202ENST00000535685 IGKV1-16P04430 117 aa8.36□□□□□ -1.07
CCDC60-202ENST00000535685 CRYGBP07316 175 aa8.36□□□□□ -1.07
CCDC60-202ENST00000535685 GSTT2P0CG29 244 aa8.36□□□□□ -1.07
CCDC60-202ENST00000535685 GSTT2BP0CG30 244 aa8.36□□□□□ -1.07
CCDC60-202ENST00000535685 DTYMKP23919 212 aa8.36□□□□□ -1.07
CCDC60-202ENST00000535685 DEFB121Q5J5C9 76 aa8.36□□□□□ -1.07
CCDC60-202ENST00000535685 VAX1Q5SQQ9 334 aa8.36□□□□□ -1.07
CCDC60-202ENST00000535685 OR10J5Q8NHC4 309 aa8.36□□□□□ -1.07
CCDC60-202ENST00000535685 FLYWCH2Q96CP2 140 aaKnown RBP8.36□□□□□ -1.07
CCDC60-202ENST00000535685 TMEM68Q96MH6 324 aa8.36□□□□□ -1.07
CCDC60-202ENST00000535685 Q9H521 79 aa8.36□□□□□ -1.07
CCDC60-202ENST00000535685 SLA2Q9H6Q3 261 aa8.36□□□□□ -1.07
CCDC60-202ENST00000535685 METTL1Q9UBP6 276 aaKnown RBP8.36□□□□□ -1.07
CCDC60-202ENST00000535685 A0A1W2PN81 502 aa8.35□□□□□ -1.07
CCDC60-202ENST00000535685 M0R1X1 148 aa8.35□□□□□ -1.07
CCDC60-202ENST00000535685 SCGNO76038 276 aa8.35□□□□□ -1.07
CCDC60-202ENST00000535685 IGLV2-23P01705 113 aa8.35□□□□□ -1.07
CCDC60-202ENST00000535685 LGALS1P09382 135 aaKnown RBP8.35□□□□□ -1.07
CCDC60-202ENST00000535685 RRASP10301 218 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms