RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 CEACAM6P40199 344 aa8.54□□□□□ -1.04
CLSTN3-206ENST00000535668 TMEM50BP56557 158 aa8.54□□□□□ -1.04
CLSTN3-206ENST00000535668 TPPP2P59282 170 aa8.54□□□□□ -1.04
CLSTN3-206ENST00000535668 HLA-DRB3P79483 266 aa8.54□□□□□ -1.04
CLSTN3-206ENST00000535668 SRSF7Q16629 238 aaKnown RBP eCLIP8.54□□□□□ -1.04
CLSTN3-206ENST00000535668 HAGHQ16775 308 aa8.54□□□□□ -1.04
CLSTN3-206ENST00000535668 MRGPRG-AS1Q2M3A8 158 aa8.54□□□□□ -1.04
CLSTN3-206ENST00000535668 KCTD21Q4G0X4 260 aa8.54□□□□□ -1.04
CLSTN3-206ENST00000535668 TMEM177Q53S58 311 aa8.54□□□□□ -1.04
CLSTN3-206ENST00000535668 Q6ZS49 121 aa8.54□□□□□ -1.04
CLSTN3-206ENST00000535668 ANKRD13BQ86YJ7 626 aa8.54□□□□□ -1.04
CLSTN3-206ENST00000535668 Q8N402 240 aa8.54□□□□□ -1.04
CLSTN3-206ENST00000535668 DHRSXQ8N5I4 330 aa8.54□□□□□ -1.04
CLSTN3-206ENST00000535668 ZFP41Q8N8Y5 198 aa8.54□□□□□ -1.04
CLSTN3-206ENST00000535668 IL17DQ8TAD2 202 aa8.54□□□□□ -1.04
CLSTN3-206ENST00000535668 CYGBQ8WWM9 190 aa8.54□□□□□ -1.04
CLSTN3-206ENST00000535668 IL1F10Q8WWZ1 152 aa8.54□□□□□ -1.04
CLSTN3-206ENST00000535668 ABHD14BQ96IU4 210 aa8.54□□□□□ -1.04
CLSTN3-206ENST00000535668 C12orf4Q9NQ89 552 aa8.54□□□□□ -1.04
CLSTN3-206ENST00000535668 PLEKHJ1Q9NW61 149 aa8.54□□□□□ -1.04
CLSTN3-206ENST00000535668 PLECQ15149 4684 aaKnown RBP8.54□□□□□ -1.04
CLSTN3-206ENST00000535668 TRBV9A0A0B4J1U6 114 aa8.53□□□□□ -1.04
CLSTN3-206ENST00000535668 IGKV1-6A0A0C4DH72 117 aa8.53□□□□□ -1.04
CLSTN3-206ENST00000535668 SLC17A2O00624 439 aa8.53□□□□□ -1.04
CLSTN3-206ENST00000535668 CA2P00918 260 aa8.53□□□□□ -1.04
CLSTN3-206ENST00000535668 TRGV3P03979 118 aa8.53□□□□□ -1.04
CLSTN3-206ENST00000535668 CSN3P07498 182 aa8.53□□□□□ -1.04
CLSTN3-206ENST00000535668 CPEP16870 476 aa8.53□□□□□ -1.04
CLSTN3-206ENST00000535668 FXYD3Q14802 87 aa8.53□□□□□ -1.04
CLSTN3-206ENST00000535668 SSX1Q16384 188 aa8.53□□□□□ -1.04
CLSTN3-206ENST00000535668 NICN1Q9BSH3 213 aa8.53□□□□□ -1.04
CLSTN3-206ENST00000535668 URM1Q9BTM9 101 aaKnown RBP8.53□□□□□ -1.04
CLSTN3-206ENST00000535668 CABLES2Q9BTV7 478 aa8.53□□□□□ -1.04
CLSTN3-206ENST00000535668 PALMDQ9NP74 551 aa8.53□□□□□ -1.04
CLSTN3-206ENST00000535668 TRBV6-7A0A0A0MS04 114 aa8.52□□□□□ -1.05
CLSTN3-206ENST00000535668 DPPA5A6NC42 116 aa8.52□□□□□ -1.05
CLSTN3-206ENST00000535668 H7C2Y5 167 aa8.52□□□□□ -1.05
CLSTN3-206ENST00000535668 ZNF701M0R085 212 aaPredicted RBP8.52□□□□□ -1.05
CLSTN3-206ENST00000535668 MYL12BO14950 172 aa8.52□□□□□ -1.05
CLSTN3-206ENST00000535668 IGHV3-11P01762 117 aa8.52□□□□□ -1.05
CLSTN3-206ENST00000535668 CDK1P06493 297 aa8.52□□□□□ -1.05
CLSTN3-206ENST00000535668 DYRK1AQ13627 763 aa8.52□□□□□ -1.05
CLSTN3-206ENST00000535668 TPBGQ13641 420 aa8.52□□□□□ -1.05
CLSTN3-206ENST00000535668 IRF3Q14653 427 aa8.52□□□□□ -1.05
CLSTN3-206ENST00000535668 PLGLAQ15195 96 aa8.52□□□□□ -1.05
CLSTN3-206ENST00000535668 OR10K2Q6IF99 312 aa8.52□□□□□ -1.05
CLSTN3-206ENST00000535668 LCN12Q6JVE5 192 aa8.52□□□□□ -1.05
CLSTN3-206ENST00000535668 GLDNQ6ZMI3 551 aaPredicted RBP8.52□□□□□ -1.05
CLSTN3-206ENST00000535668 OR4A4PQ8NGN8 299 aa8.52□□□□□ -1.05
CLSTN3-206ENST00000535668 DDB2Q92466 427 aa8.52□□□□□ -1.05
CLSTN3-206ENST00000535668 DGCR14Q96DF8 476 aaKnown RBP8.52□□□□□ -1.05
CLSTN3-206ENST00000535668 FAM103A1Q9BTL3 118 aaKnown RBP8.52□□□□□ -1.05
CLSTN3-206ENST00000535668 MND1Q9BWT6 205 aa8.52□□□□□ -1.05
CLSTN3-206ENST00000535668 ZC4H2Q9NQZ6 224 aa8.52□□□□□ -1.05
CLSTN3-206ENST00000535668 PEF1Q9UBV8 284 aaKnown RBP8.52□□□□□ -1.05
CLSTN3-206ENST00000535668 AK3Q9UIJ7 227 aa8.52□□□□□ -1.05
CLSTN3-206ENST00000535668 HYDINQ4G0P3 5121 aa8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 A0A087WXM4 84 aa8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 C13orf42A0A1B0GVH6 325 aa8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 TRDCB7Z8K6 153 aa8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 SOCS1O15524 211 aa8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 MRPS14O60783 128 aaKnown RBP8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 APOA2P02652 100 aa8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 IFNA6P05013 189 aa8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 GNAO1P09471 354 aa8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 SCTP09683 121 aa8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 RRASP10301 218 aa8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 PSMA1P25786 263 aaKnown RBP8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 RPS16P62249 146 aaKnown RBP8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 P2RY14Q15391 338 aa8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 SPHARQ15513 63 aa8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 TATDN3Q17R31 274 aa8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 HSD17B12Q53GQ0 312 aa8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 C8orf59Q8N0T1 100 aaPredicted RBP8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 TEX45Q8NA69 505 aa8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 ADAD2Q8NCV1 583 aaKnown RBP8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 CASTOR1Q8WTX7 329 aa8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 MS4A10Q96PG2 267 aa8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 GFI1Q99684 422 aa8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 VCX3AQ9NNX9 186 aa8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 OR1A1Q9P1Q5 309 aa8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 ZNF221Q9UK13 617 aa8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 BLOC1S6Q9UL45 172 aa8.51□□□□□ -1.05
CLSTN3-206ENST00000535668 SHISA3A0PJX4 238 aa8.5□□□□□ -1.05
CLSTN3-206ENST00000535668 FAM223BA6NKX1 122 aa8.5□□□□□ -1.05
CLSTN3-206ENST00000535668 SRRM4A7MD48 611 aaKnown RBP8.5□□□□□ -1.05
CLSTN3-206ENST00000535668 SLC25A17O43808 307 aa8.5□□□□□ -1.05
CLSTN3-206ENST00000535668 ARSBP15848 533 aa8.5□□□□□ -1.05
CLSTN3-206ENST00000535668 PSMD7P51665 324 aa8.5□□□□□ -1.05
CLSTN3-206ENST00000535668 UBE2KP61086 200 aa8.5□□□□□ -1.05
CLSTN3-206ENST00000535668 INSL4Q14641 139 aa8.5□□□□□ -1.05
CLSTN3-206ENST00000535668 TRAM1Q15629 374 aa8.5□□□□□ -1.05
CLSTN3-206ENST00000535668 PLAC9Q5JTB6 97 aa8.5□□□□□ -1.05
CLSTN3-206ENST00000535668 TMEM91Q6ZNR0 172 aa8.5□□□□□ -1.05
CLSTN3-206ENST00000535668 FAM223AQ8IWN6 122 aa8.5□□□□□ -1.05
CLSTN3-206ENST00000535668 OR56B1Q8NGI3 324 aa8.5□□□□□ -1.05
CLSTN3-206ENST00000535668 SNAPC3Q92966 411 aa8.5□□□□□ -1.05
CLSTN3-206ENST00000535668 ADTRPQ96IZ2 230 aa8.5□□□□□ -1.05
CLSTN3-206ENST00000535668 HIPK2Q9H2X6 1198 aa8.5□□□□□ -1.05
CLSTN3-206ENST00000535668 RDH8Q9NYR8 311 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms