RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 FIP1L1Q6UN15 594 aaKnown RBP12.44□□□□□ -0.42
SSH3-210ENST00000532881 ACP7Q6ZNF0 438 aa12.44□□□□□ -0.42
SSH3-210ENST00000532881 GGACTQ9BVM4 153 aa12.44□□□□□ -0.42
SSH3-210ENST00000532881 TREM2Q9NZC2 230 aa12.44□□□□□ -0.42
SSH3-210ENST00000532881 DUSP13Q9UII6 198 aa12.44□□□□□ -0.42
SSH3-210ENST00000532881 PROP1O75360 226 aa12.44□□□□□ -0.42
SSH3-210ENST00000532881 ADIRFQ15847 76 aa12.44□□□□□ -0.42
SSH3-210ENST00000532881 TMEM41BQ5BJD5 291 aa12.44□□□□□ -0.42
SSH3-210ENST00000532881 PYY3Q5JQD4 70 aa12.44□□□□□ -0.42
SSH3-210ENST00000532881 Q6ZT83 130 aa12.44□□□□□ -0.42
SSH3-210ENST00000532881 MOB1BQ7L9L4 216 aa12.44□□□□□ -0.42
SSH3-210ENST00000532881 Q8IYB0 196 aa12.44□□□□□ -0.42
SSH3-210ENST00000532881 CD177Q8N6Q3 437 aa12.44□□□□□ -0.42
SSH3-210ENST00000532881 TMEM178AQ8NBL3 297 aa12.44□□□□□ -0.42
SSH3-210ENST00000532881 ZNF251Q9BRH9 671 aa12.44□□□□□ -0.42
SSH3-210ENST00000532881 CISD1Q9NZ45 108 aaKnown RBP12.44□□□□□ -0.42
SSH3-210ENST00000532881 ROS1P08922 2347 aa12.44□□□□□ -0.42
SSH3-210ENST00000532881 LRRC30A6NM36 301 aa12.43□□□□□ -0.42
SSH3-210ENST00000532881 TRIP6Q15654 476 aaKnown RBP12.43□□□□□ -0.42
SSH3-210ENST00000532881 NCR3LG1Q68D85 454 aa12.43□□□□□ -0.42
SSH3-210ENST00000532881 TMEM14EPQ6UXP3 125 aa12.43□□□□□ -0.42
SSH3-210ENST00000532881 ZNF610Q8N9Z0 462 aa12.43□□□□□ -0.42
SSH3-210ENST00000532881 NINJ1Q92982 152 aa12.43□□□□□ -0.42
SSH3-210ENST00000532881 GVINP1Q7Z2Y8 2422 aa12.43□□□□□ -0.42
SSH3-210ENST00000532881 TRGC1P0CF51 173 aa12.43□□□□□ -0.42
SSH3-210ENST00000532881 SELLP14151 372 aa12.43□□□□□ -0.42
SSH3-210ENST00000532881 FGF7P21781 194 aa12.43□□□□□ -0.42
SSH3-210ENST00000532881 SLC35E3Q7Z769 313 aa12.43□□□□□ -0.42
SSH3-210ENST00000532881 MBD3L1Q8WWY6 194 aa12.43□□□□□ -0.42
SSH3-210ENST00000532881 HES4Q9HCC6 221 aa12.43□□□□□ -0.42
SSH3-210ENST00000532881 SDF2L1Q9HCN8 221 aa12.43□□□□□ -0.42
SSH3-210ENST00000532881 TRAV1-1A0A0B4J248 108 aa12.42□□□□□ -0.42
SSH3-210ENST00000532881 HOXA5P20719 270 aa12.42□□□□□ -0.42
SSH3-210ENST00000532881 VHLLQ6RSH7 139 aa12.42□□□□□ -0.42
SSH3-210ENST00000532881 RPRMLQ8N4K4 120 aa12.42□□□□□ -0.42
SSH3-210ENST00000532881 ZNRF1Q8ND25 227 aa12.42□□□□□ -0.42
SSH3-210ENST00000532881 OR2Z1Q8NG97 314 aa12.42□□□□□ -0.42
SSH3-210ENST00000532881 DTD1Q8TEA8 209 aa12.42□□□□□ -0.42
SSH3-210ENST00000532881 FAM210BQ96KR6 192 aa12.42□□□□□ -0.42
SSH3-210ENST00000532881 QTRT1Q9BXR0 403 aaKnown RBP12.42□□□□□ -0.42
SSH3-210ENST00000532881 HSPB7Q9UBY9 170 aa12.42□□□□□ -0.42
SSH3-210ENST00000532881 A0A087WWC5 75 aa12.42□□□□□ -0.42
SSH3-210ENST00000532881 PMS2P5A8MQ11 134 aa12.42□□□□□ -0.42
SSH3-210ENST00000532881 OR9G9P0C7N8 305 aa12.42□□□□□ -0.42
SSH3-210ENST00000532881 TUBG1P23258 451 aa12.42□□□□□ -0.42
SSH3-210ENST00000532881 EIF4EBP1Q13541 118 aaPredicted RBP12.42□□□□□ -0.42
SSH3-210ENST00000532881 C1QL4Q86Z23 238 aa12.42□□□□□ -0.42
SSH3-210ENST00000532881 OR10D4PQ8NGN7 298 aa12.42□□□□□ -0.42
SSH3-210ENST00000532881 LRRC29Q8WV35 223 aa12.42□□□□□ -0.42
SSH3-210ENST00000532881 ELOVL1Q9BW60 279 aa12.42□□□□□ -0.42
SSH3-210ENST00000532881 TOLLIPQ9H0E2 274 aa12.42□□□□□ -0.42
SSH3-210ENST00000532881 SPTBN2O15020 2390 aa12.41□□□□□ -0.42
SSH3-210ENST00000532881 OOEPA6NGQ2 149 aa12.41□□□□□ -0.42
SSH3-210ENST00000532881 RPL39P5Q59GN2 51 aa12.41□□□□□ -0.42
SSH3-210ENST00000532881 FFAR4Q5NUL3 377 aa12.41□□□□□ -0.42
SSH3-210ENST00000532881 DPPA3Q6W0C5 159 aa12.41□□□□□ -0.42
SSH3-210ENST00000532881 C1orf229Q6ZS94 237 aaPredicted RBP12.41□□□□□ -0.42
SSH3-210ENST00000532881 DEFB124Q8NES8 71 aa12.41□□□□□ -0.42
SSH3-210ENST00000532881 SMIM7Q9BQ49 75 aa12.41□□□□□ -0.42
SSH3-210ENST00000532881 TMEM204Q9BSN7 226 aa12.41□□□□□ -0.42
SSH3-210ENST00000532881 CSMD1Q96PZ7 3565 aa12.41□□□□□ -0.42
SSH3-210ENST00000532881 TRAV3A0A0B4J244 114 aa12.41□□□□□ -0.42
SSH3-210ENST00000532881 IGKV3-15P01624 115 aa12.41□□□□□ -0.42
SSH3-210ENST00000532881 CRYAAP02489 173 aa12.41□□□□□ -0.42
SSH3-210ENST00000532881 P0C879 139 aa12.41□□□□□ -0.42
SSH3-210ENST00000532881 HOXC12P31275 282 aa12.41□□□□□ -0.42
SSH3-210ENST00000532881 PRSS8Q16651 343 aa12.41□□□□□ -0.42
SSH3-210ENST00000532881 DUX4L9Q6RFH8 374 aaPredicted RBP12.41□□□□□ -0.42
SSH3-210ENST00000532881 H2BFWTQ7Z2G1 175 aa12.41□□□□□ -0.42
SSH3-210ENST00000532881 OR10G4Q8NGN3 311 aa12.41□□□□□ -0.42
SSH3-210ENST00000532881 OR10G9Q8NGN4 311 aa12.41□□□□□ -0.42
SSH3-210ENST00000532881 OR10G7Q8NGN6 311 aa12.41□□□□□ -0.42
SSH3-210ENST00000532881 PSMG3Q9BT73 122 aaPredicted RBP12.41□□□□□ -0.42
SSH3-210ENST00000532881 VAX2Q9UIW0 290 aa12.41□□□□□ -0.42
SSH3-210ENST00000532881 HCFC1P51610 2035 aa12.41□□□□□ -0.42
SSH3-210ENST00000532881 TRAV38-1A0A0B4J264 116 aa12.4□□□□□ -0.42
SSH3-210ENST00000532881 FCGR3BO75015 233 aa12.4□□□□□ -0.42
SSH3-210ENST00000532881 ZNF134P52741 427 aa12.4□□□□□ -0.42
SSH3-210ENST00000532881 UBE2G2P60604 165 aa12.4□□□□□ -0.42
SSH3-210ENST00000532881 C9orf152Q5JTZ5 239 aa12.4□□□□□ -0.42
SSH3-210ENST00000532881 INO80CQ6PI98 192 aaPredicted RBP12.4□□□□□ -0.42
SSH3-210ENST00000532881 OR51G1Q8NGK1 321 aa12.4□□□□□ -0.42
SSH3-210ENST00000532881 OR4F5Q8NH21 305 aa12.4□□□□□ -0.42
SSH3-210ENST00000532881 SNX22Q96L94 193 aa12.4□□□□□ -0.42
SSH3-210ENST00000532881 OR4F4Q96R69 305 aa12.4□□□□□ -0.42
SSH3-210ENST00000532881 AGMATQ9BSE5 352 aa12.4□□□□□ -0.42
SSH3-210ENST00000532881 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.4□□□□□ -0.42
SSH3-210ENST00000532881 IGHV1-18A0A0C4DH31 117 aa12.4□□□□□ -0.42
SSH3-210ENST00000532881 MARCH11A6NNE9 402 aa12.4□□□□□ -0.42
SSH3-210ENST00000532881 C1QTNF9BB2RNN3 333 aa12.4□□□□□ -0.42
SSH3-210ENST00000532881 SERF2P84101 59 aa12.4□□□□□ -0.42
SSH3-210ENST00000532881 ARFGEF3Q5TH69 2177 aa12.39□□□□□ -0.43
SSH3-210ENST00000532881 PAGE4O60829 102 aa12.39□□□□□ -0.43
SSH3-210ENST00000532881 CDX1P47902 265 aaPredicted RBP12.39□□□□□ -0.43
SSH3-210ENST00000532881 MEF2BQ02080 365 aaPredicted RBP12.39□□□□□ -0.43
SSH3-210ENST00000532881 SLC35E4Q6ICL7 350 aa12.39□□□□□ -0.43
SSH3-210ENST00000532881 C16orf82Q7Z2V1 217 aa12.39□□□□□ -0.43
SSH3-210ENST00000532881 MRGPRGQ86SM5 289 aa12.39□□□□□ -0.43
SSH3-210ENST00000532881 SNIP1Q8TAD8 396 aaKnown RBP12.39□□□□□ -0.43
SSH3-210ENST00000532881 Q8TCH9 128 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms